KEGG   Eurytemora carolleeae: 111707560
Entry
111707560         CDS       T07296                                 
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33
  KO
K15542  polyadenylation factor subunit 2
Organism
eaf  Eurytemora carolleeae
Pathway
eaf03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:eaf00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    111707560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:eaf03019]
    111707560
Messenger RNA biogenesis [BR:eaf03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     111707560
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WDR55 WD40_Gbeta EIF3I Beta-prop_EIPR1 Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_IFT140_1st Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_Aladin ANAPC4_WD40 Beta-prop_Vps41 Beta-prop_WDR19_1st WD40_RFWD3 WDR90_beta-prop_4th Beta-prop_WDR41 WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_HPS5 NBCH_WD40 eIF2A Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N PEP5_VPS11_N Beta-prop_ACSF4 Beta-prop_DCAF12 Beta-prop_WDR11_2nd MIOS_WD40 Beta-prop_IP5PC_F RRM_LARP4
Other DBs
NCBI-GeneID: 111707560
NCBI-ProteinID: XP_023336441
LinkDB
Position
Unknown
AA seq 444 aa
MKWSSNDSWMVTGDHGGYIKYWQSNMNNVKMFQAHKEPVRQVAFCPTDTKFASCSDDGTV
RIWDFQRCMEERVLRGHGSDVKCCDWHPQKGIVVSGSKDNQQPLKLWDPRNGTVLTTIHA
HKSTVMDCRFNRNGNWLLTASRDHLLKLFDIRNMKEEVQTFRGHKKEASAVAWHPIHEGL
FCSGGSDGSVIFWHVDQEKEVGQIEQAHESIVWTLVWHPVGHILTTGSNDHTVKFWSRNR
PGDPMRDKYNLNTLPAGVEEDTGNIGDINDTKPGVDGVGVGSSSIPGMGGVDRTEKQDFK
LSIPGLDVQGAPEEPSLKKTPFVKPISRTFQSSWNEPKTEDRGVKRLYGERESSNLPLPS
QVVGAGVGPTRGVGAVGVGPLDPRRNEVTAQPTAITLSQLQQEATAVVALGQIIPVLPGG
PLYQSIGAGEMAIRDTLLRSNIWF
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgaagtggagtagcaatgatagttggatggttaccggcgaccacggtgggtatataaaa
tactggcagtccaatatgaacaatgtcaagatgtttcaagcacataaagagcccgtcaga
caggttgcattctgtcccactgacaccaagttcgccagctgttccgacgacggaactgtt
cggatttgggatttccaacggtgtatggaggagcgggtattgcgaggacatggatctgat
gtgaaatgttgtgattggcacccacagaaggggattgttgtatctgggagtaaagataat
cagcagccgcttaaactctgggatcctaggaatggaacggttttgacgacgatacacgca
cataagtccactgttatggattgtaggtttaacaggaacgggaattggttactcaccgct
agcagagatcatctattgaagctattcgatatcagaaatatgaaagaggaggttcagacc
ttcagagggcacaaaaaggaggcgagtgctgtagcctggcatcctattcatgaaggttta
ttctgtagcgggggtagtgatggttcagtaattttctggcacgtcgatcaggagaaggaa
gtgggacaaattgaacaggctcatgaatctatagtgtggactctagtctggcatcctgta
ggacatattctcactaccggcagtaacgatcatacagtcaaattctggtcaagaaaccgg
cctggagatccaatgcgggacaagtacaacctgaatactctgcctgcaggagttgaagag
gatactggaaatattggagatatcaacgatactaaaccaggtgtggatggagtgggagtg
ggttctagttctatacctggtatgggtggagtggatcgaacagagaagcaagatttcaag
ttgtctattcctggtcttgatgtacagggcgcccctgaagagccctctctgaagaaaact
cctttcgtgaaacctatttctagaaccttccaatcctcgtggaacgaacctaaaacagag
gatagaggagtcaaacgattatatggtgagcgtgaaagtagcaatctccctcttcctagt
caagtagttggagcaggagtaggtccaactcgtggagtaggtgctgtaggagtaggtccc
cttgatcctcggagaaatgaagttactgctcaaccaactgcaatcacactctcacaactt
caacaggaagctacagctgttgtagccctgggtcagattatacctgttcttcctggaggc
cctctctatcagtctataggagcaggagagatggcaattagagacacattgctcaggtcc
aatatttggttttaa

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