Eurytemora affinis: 111707919
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Entry
111707919 CDS
T07296
Name
(RefSeq) nucleoporin NDC1-like isoform X1
KO
K14315
nucleoporin NDC1
Organism
eaf
Eurytemora affinis
Pathway
eaf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111707919
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eaf03019
]
111707919
Messenger RNA biogenesis [BR:
eaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111707919
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
111707919
NCBI-ProteinID:
XP_023336872
LinkDB
All DBs
Position
Unknown
AA seq
570 aa
AA seq
DB search
MSGTEDWFLDSLRGRTNSAGAWAVAVSTGWTTLVTAIFLLVQAPTEGLMGMLLTCLSRLT
SSDSFFYLVILAVLVVFWTKLQAKYASVIPCVAKSVVWTLAQTFRPEILISFLQFIGFGF
CSSWLLLQIVAAPFSNLTAPCKEIDSSFCYNKVHIFLLFAGVFSGLVEAIVFHFKNGNYT
SIPIIGLDRFSQFKIKLDSNLMRLCLDSFYTLRVYYPLYLVISVLFGGIFRPAGLGYLEL
LSPTLVAHCWLVVLYVKVLRFTISSWVSVNLTQPVHLELANLLEGVGSTNLLLSTLLLQN
LVDQVAEKPDIRREVFSLSLPGGHPHTWNSILSLCHRHIVSMKDDLNSLLSPAPPAPAKE
IGPIEPPPPPQIELLSPNIRRLAPTSARQVVPVLPIPPSLPGRINQFCESVLDSLKRRPL
VGWLVNQAPDVPFRVVFTRSQLVIFCVEILSFLVSASIKEDSSSQVGTYINLERFIKHGR
YGVVQKDLPYILTNLLLLEQNIDRCRGHGVPYYRKKSADIPDVHLKHELKSAVKSAIFRI
VVEFKEHILNVPLPADLSQKIKNYQQFLEA
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaactgaagactggtttttagatagcttgagagggaggaccaatagtgcaggt
gcatgggcggtagcagtgagtacaggatggacaactttagtcaccgctatctttttactt
gttcaggctcctacagaagggttgatgggaatgttgttgacatgtttatcaagactgact
agttctgacagtttcttttatttggtgatactcgcagttctggttgtattctggactaaa
ctacaagctaaatatgccagtgtcattccctgtgttgccaagtcggtggtgtggacgtta
gcgcagacttttcggccggaaatactgatttcctttcttcagttcattggttttgggttc
tgcagcagctggttgctgctgcagattgtagctgctcccttctctaatctgacagctccc
tgcaaggaaattgacagtagcttctgttacaataaagttcatattttcctacttttcgcg
ggagttttctcaggacttgttgaagctattgtattccatttcaagaacgggaactataca
agtatacctatcattggattggacagattctctcagtttaagattaagcttgactctaat
ctgatgaggctttgcttagattccttctacaccttgagagtgtattaccctctctacctc
gtcatatcagtcctgttcggggggatattcaggccggctggactaggctatcttgaactg
ctttctccaaccctagtagctcattgttggctggtcgttttatacgtcaaggtactaaga
ttcactatcagttcctgggtttctgttaatttaacacaaccagttcatctagagcttgct
aatctacttgaaggagtaggttccactaacctacttctctctaccctactcttacagaat
ctggtggaccaggtggcggagaaaccggatatccgacgtgaggttttctctctttctttg
cccggaggtcatcctcacacctggaattcaatacttagcctctgtcacaggcacattgta
agcatgaaggatgatctgaattccctcctctccccagctcccccagctccagctaaagag
attggtccaatagaacctccgccgccgcctcagatagaactactttcgccaaacattcgc
cgtcttgccccgacgtccgccagacaggtagttcctgtgctgccgatcccgccctctcta
cctggtcgtataaaccagttttgtgaatctgttctggacagcttgaaaagacgaccttta
gtcggctggttggtcaatcaggcccctgatgttcctttccgagttgtattcacacgatct
cagcttgtaatattctgcgtggaaattctctcttttctagtgagcgccagtattaaagaa
gacagttcctctcaggtcggaacttacattaatcttgaacgcttcattaaacatggaagg
tatggagttgttcagaaggatttaccttatattctcaccaatcttcttctcctagaacag
aacattgataggtgtagaggacacggtgttccttattacaggaagaagagtgcggatata
ccggatgttcatctaaagcacgaactcaagagcgcggtaaaatccgcaatttttaggatt
gttgttgagtttaaggaacatattctcaatgttcctcttcccgcagatctttcacagaag
ataaaaaactatcagcagttccttgaagcgtag
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