Eurytemora carolleeae: 111708505
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Entry
111708505 CDS
T07296
Name
(RefSeq) LOW QUALITY PROTEIN: replication protein A 70 kDa DNA-binding subunit-like
KO
K07466
replication factor A1
Organism
eaf
Eurytemora carolleeae
Pathway
eaf03030
DNA replication
eaf03420
Nucleotide excision repair
eaf03430
Mismatch repair
eaf03440
Homologous recombination
eaf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111708505
03420 Nucleotide excision repair
111708505
03430 Mismatch repair
111708505
03440 Homologous recombination
111708505
03460 Fanconi anemia pathway
111708505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eaf03000
]
111708505
03032 DNA replication proteins [BR:
eaf03032
]
111708505
03400 DNA repair and recombination proteins [BR:
eaf03400
]
111708505
Transcription factors [BR:
eaf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
111708505
DNA replication proteins [BR:
eaf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
111708505
DNA repair and recombination proteins [BR:
eaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
111708505
MMR (mismatch excision repair)
111708505
DSBR (double strand breaks repair)
HR (homologous recombination)
111708505
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
CDC24_OB3
DUF223
HROB
Motif
Other DBs
NCBI-GeneID:
111708505
NCBI-ProteinID:
XP_023337672
LinkDB
All DBs
Position
Unknown
AA seq
662 aa
AA seq
DB search
MPSSLDVLGSKPIQSSGQERHRLLISDGQYSNSFSMLATQLNHMIHENKLAAFTVVKIKK
HICNQVAGGKSVLILMDIEVVNPGSEVGRKIGSPVQLPTDGSAPSKINTDPNAGAVKRPA
EPSNSAPPAKLPTNRSVLSSKPSAVSASSAGHVVAPISSITPYQNKWTIKARVTSKSDIR
TWNKASGSGKLFSMDLMDDSGEIRATAFKEQCDQYYDMIQVGKVYYISRCAVKAANKAYS
KIKNDYELTFKDNVLVEKAEDNESGDVPTMSYDFAQLSDLAGASKDTIVDIIFVLFISDL
AGASKDTIVDIIFVLFISDLAGASKDTIVDIIFVSFISDLAGASKDTIVDILGICKDTTE
AVTITTKAGRELVKREINVCDQSNTEVVLTLWGTTAENFQGAGQPVIAVKGAKVSDFNGI
TLSGGDLMIDPELEQTQQIKSWWEKSGRNSTFNSLTVQGQRGGGAGADAGSVKSLSEVKL
ENLGYNSDRGEYYSCLASVTYFSKDKALYKACPNQVDGKECNKKVQENGDGSFRCEKCST
DLQNYKWRLMLSLTIADYSDSVWANCFQETAEKLLEATSEEVGTLSEQDEERYNAVFSNA
SFKTYSFRMRAKADTYNDETKIKHTIVAVDNIDFSALNKQYIKEIEALGGCIPDSVNRDK
YI
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgccttcatcacttgatgttctaggttctaaacctatacagagttcaggacaagagagg
cacagacttctgatatctgatggacagtacagtaacagtttcagtatgctggcaactcaa
ctcaatcatatgattcatgagaataagttggctgcctttaccgttgtgaaaataaagaaa
catatctgcaatcaggtggccggtggtaaatctgttctgattctcatggatatagaggtg
gttaacccaggatccgaagtcggaagaaagattggatctcctgtgcaacttcccacagac
ggatctgctcctagtaagataaatactgaccctaacgctggagcagtgaaaagaccagct
gagccaagcaactctgcaccaccggctaagctgccaacaaacaggagtgtcctgtccagt
aaacctagtgctgtatctgctagtagtgccggtcacgtggttgcccccatcagttccatc
acgccgtatcagaacaaatggaccataaaggcccgtgtgacctctaaatctgatataaga
acctggaacaaggcgagtgggtcagggaaactatttagtatggatctcatggatgacagt
ggggagatcagggccactgcgttcaaggagcagtgtgatcaatactacgatatgatccag
gtcgggaaagtgtattacatctccagatgtgccgtgaaagctgcaaacaaagcctactct
aagataaagaatgattacgagttaacattcaaggataatgttctggtagagaaagctgag
gataatgagagtggagacgtaccaaccatgagttatgattttgcccagctaagtgatcta
gctggagctagcaaggatactattgtggatattatatttgttctatttatcagtgatcta
gctggagctagcaaggatactattgtggatattatatttgttctatttatcagtgatcta
gctggagctagcaaggatactattgtggatattatatttgtttcttttatcagtgatcta
gctggagctagcaaggatactattgtggatattttggggatatgcaaggatacaaccgaa
gctgtgaccataaccaccaaagctggtagggagctggtgaagagggaaatcaatgtttgt
gatcaatccaacacagaggttgtactgaccctatggggtaccacagcagagaatttccaa
ggagccggtcaacctgtaatagcagtcaagggtgctaaggtttcagactttaacgggatt
actctcagtggcggggatcttatgatagaccctgagttggaacagactcagcagattaaa
tcctggtgggagaagagtggtagaaactcgaccttcaacagtctcactgttcagggtcaa
agaggaggaggagcaggagcagatgcaggatccgtcaaatccttgtccgaggttaaactg
gagaaccttggctacaattctgacaggggtgagtactacagctgtctggccagtgtaacg
tacttctccaaggataaggctctatacaaggcctgccccaaccaggttgatgggaaggag
tgcaacaagaaggtgcaggagaacggagacggatctttcaggtgtgagaagtgctctaca
gacctccagaactataagtggagactaatgctcagtttgaccattgcggattactctgat
tctgtttgggcaaactgtttccaggaaaccgcggagaagctgctggaggctacttcggag
gaggtcggaaccctatctgagcaggatgaggagagatacaacgcagtattcagtaacgcc
agcttcaagacctactcattccgtatgcgcgccaaggcagacacctacaacgatgagacc
aagattaagcacaccatcgtcgcggtcgacaatatcgacttttccgccctcaacaagcag
tacattaaagagatagaagccctgggtggatgtatacccgattctgtaaacagagacaaa
tatatctaa
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integrated database retrieval system
