Eurytemora affinis: 111708848
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Entry
111708848 CDS
T07296
Name
(RefSeq) transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
eaf
Eurytemora affinis
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eaf03021
]
111708848
03036 Chromosome and associated proteins [BR:
eaf03036
]
111708848
Transcription machinery [BR:
eaf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
111708848
Chromosome and associated proteins [BR:
eaf03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
111708848
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
S1
SPT6_acidic
HTH_44
OB_RRP5_4th
HHH_3
S1_RRP5
Serglycin
Motif
Other DBs
NCBI-GeneID:
111708848
NCBI-ProteinID:
XP_023338117
LinkDB
All DBs
Position
Unknown
AA seq
1795 aa
AA seq
DB search
MADFMDEEAVESEEEVSGDEDAIQARKNKKRALDDSSDDEEDEDEEKAMEEMKDFIADED
EEEEEDRSRKRRKKKRRRKRSESGSGSGSRSGSRSGSRSRSKSKARSRSKSRSEGSDLDD
DDMDLIQENLGVKFQKKRSRIQKMDSDESEDESRRDASGSDDELPDPERSSRARSGSVES
DDGIQDFIVDEEGKPIERKKSRKKHIFDDSQRQLAEDIFGVAFDYEEFAQSEGSGDSSEE
DFDPDEDEPEQKRREKKKRKPAKTIFDIYDPYDLEMGHYTDLDQEIRTTDIPERXRNFKF
IKLARSIQTISQQADYTHADCRHWQDRSSTTEKIKKALDFMRQQFLEVPFIAFYRDDLDR
LDVVDSVEELKDVYQHFLLYHSRNIGACQDYHRKRAKEEKAERKERKKAGKQKKYKTIKK
KIRRKATRIVKKTVTETVNNEETGEEEDIEKEVEEEVETEVESEVDEEVTDDEAMLEDND
EDEEEDEEEEEQEEEEVIKYAKRNDAYSLCVKFKLSGLAKTFGLTPEEFGENLQDNYAKH
DVPEETREFEDVAAEYMNDKINTKEAVAKAAVYMVASQLAREPIIRSTLRDILHERATVT
VWPTKKGTKEIGEEHDMYTMKYLRNKPVRSFKDEEFLKLMTAVDSRLVELSIGEDLQGST
DGSSYIAEAVDLYKEEGFSKKVAEWNQLRKQAVELALKEMLLPQLRKELINKMKYEAIXL
PQEMLLPQLRKELINKMKYEAIEGIKRACQRTLEDWIKWAPYQVTWDEDLDEDDWDTSGG
HRILGIAYSPDREEAGFAALITAEGELGDYIKIPFLTYSNKSWQERERLGKEQDMRMLSN
FIRSKRPHGIAICCLDRTAVNVLGDLVQICTDLSNEDEAFPELKCVMVDSNLATVYSNTN
KSNTDFRYSFIHSFIHTYILPFIHHRKIWISSFVRQRLIGYSCKSDTPLSTRHSLLSVPN
SLCTILLSIYLSIYLQDLVQEEDLLKALNQEFINKVNMVGVDINECVAHPHTSYLVQFIG
GLGPRKGAALLKTLRGMSNPRLENRQQLVTSCHMGPKVFINCAGFVKIDTTALGDSEQYI
EVLDGSRIHNEAYEWARKMAVDALEYDDDEEEGNPASAVEDILRTGLDWTGPDRTGYGSS
VWIWIWILIYIDIISRLKFEEPSSEDIFDIISRLKFEEPSSEDIFDMTYKESPKTFYVGK
LMQARVERFQYKRPPQEDLDKAAPVRKGETNLWECPFCGKNDFPELTEVWNHFDAVNDCP
GKCVGVAVRLENGIQGFIHIAELSDSTVLCPEDRMKIGQNIYVRITKIDAESSRVHCTSK
TSALRDVEDAFRQAKDDHYDREAEKKETAAEVKQIKDKLKASYVKRVITHPSFQNISFKD
AEKLLEQMEQVIFRKKLHIFYINVFQVTDNIYQHVNVREEGKVNAFSLGSSLWIGTEEYE
DLDEIIARFVNPMASNTRDIINFKYYKNGNKTMAEEYLVKEKKGNMSKIPYLLTPSNEFP
GKFLLSYLPRIKVHHEYVSVTPDGFRFRTLNHDSLTSMIKWFKEHFRDPIPGTPSASPGV
RGTRTPYGSRSTPSLRPGITPGAMSMAGGSTPYGGTPGYGSRQNAAYTPTANTPAMTPFL
TPGPSNTPRGYSGGTPKAGFPGSNTPRSTYGGNTPRGGGSTTPRPSGSQTPSSRPSASPA
YKGRGSGAGNAWAAAAESWAGGAGRRTPRGDDRGQKGYSTTPRYEDPRLTPKYGGRTPQQ
GHSQQGRSSAGGRGPPSSQGSSRTPQYGRNEAAGSNRDNRTPRGQFGDSTPLYDE
NT seq
5388 nt
NT seq
+upstream
nt +downstream
nt
atggccgattttatggacgaagaggccgtggagagcgaggaagaagtgtccggtgatgag
gatgccattcaggcacggaagaataagaaacgcgcgttggacgacagctcagatgatgaa
gaggatgaggatgaggagaaggcaatggaagaaatgaaagactttattgcggatgaggat
gaagaggaagaagaggataggtctcgaaagagaagaaagaagaagagaaggaggaaaaga
tctgaatccggatctgggtcaggatccagatcaggctcaagatccggttctaggtccaga
tctaaatctaaagcccgctccagatccaaatcccgttctgagggttcagatttagatgat
gacgatatggatctcattcaggagaaccttggagtcaagtttcagaagaaacgatcaagg
atccagaaaatggactcggacgagtctgaagatgagagtagaagagatgctagtggttca
gatgacgaactcccggatccagagagatcaagcagggctagatctggttctgtagaaagt
gatgacgggatacaggactttatagtggacgaagaaggaaagccgattgagcggaagaaa
agtcgaaaaaagcatattttcgacgattcccaacgtcagctggccgaagatatctttgga
gtagcattcgactacgaggagtttgcccagtctgaaggaagtggagatagttcagaggaa
gactttgatccagatgaagacgaaccagagcaaaaaaggcgggaaaagaagaagaggaaa
cccgcgaagacaattttcgatatctatgatccctacgatctggagatgggacattatact
gatcttgatcaagaaatcagaactacagatataccagaacgtatncgtaatttcaagttc
atcaaactggcgcggtcaattcaaaccatctcacagcaagctgattacacccacgcagat
tgcaggcactggcaggataggtctagtactacagagaaaattaagaaagctcttgatttc
atgagacaacagttcctggaggttccattcatagctttctatagggatgacctggataga
ctggacgtagttgatagtgttgaagaactgaaagatgtttaccaacacttccttctttat
cattccaggaatattggtgcatgtcaggactaccaccgtaagagagcgaaagaggagaaa
gctgagagaaaggaaaggaaaaaagctggaaaacagaagaaatataagacaatcaagaag
aagatcaggcgtaaagcgacgcgaattgtgaagaaaacagtgacagagaccgtaaacaac
gaggaaacgggagaggaggaggatatagagaaggaggttgaggaggaggttgagaccgag
gtagagagtgaggtcgacgaggaagtgaccgacgacgaggcaatgctggaggacaatgac
gaggatgaagaggaggatgaggaagaagaggaacaggaagaggaagaagtgattaaatat
gctaaaaggaacgatgcatactcactctgtgttaagttcaagttgtctggtttggcaaaa
acgtttggtttgaccccagaggagtttggggagaacttgcaggacaactacgccaagcac
gacgtgcccgaggagaccagggagttcgaggatgttgcagcagagtatatgaatgataag
attaataccaaggaggcggtcgcaaaagcagcagtgtatatggtcgcttcacagttagcc
agggaaccaattattcgctccacgctcagagatattcttcatgaacgtgcaactgttaca
gtctggcctacaaagaaaggaactaaagaaattggagaggaacatgacatgtacacaatg
aaatatcttaggaataaaccagtcagatcctttaaggacgaggagttcttgaaattgatg
actgctgtggattctagattagtggagttgagtattggagaggatcttcagggatccaca
gatggatccagttatatagctgaggctgtggatctgtataaagaagaaggattctcaaag
aaggttgctgagtggaaccaactgaggaaacaggcggtagagctagctcttaaggaaatg
ctgctgccccagcttcgaaaggaactgatcaacaagatgaagtatgaggccatagantta
cctcaggaaatgctgctgccccagcttcgaaaggaactgatcaacaagatgaagtatgag
gccatagaaggaataaagcgtgcttgtcagcgcaccctcgaggactggattaaatgggct
ccgtatcaggtcacgtgggacgaggatttggacgaagacgattgggatacaagtggcgga
caccgaatacttggtatcgcctacagccctgatagagaagaggcggggttcgccgcctta
ataacggcggagggcgagctcggcgattatatcaaaattcccttcctcacctactccaac
aagtcctggcaggaaagagaacggctggggaaagagcaggatatgagaatgctgtccaac
tttatcagaagcaagagaccgcatggtatagctatctgctgtcttgatagaacagctgtc
aatgtattgggagatctagttcagatctgtacagatctttccaacgaagacgaagctttt
cctgagctcaagtgcgttatggtagacagcaatttggctacagtttattctaatacaaac
aaatcaaatacagacttcaggtattcattcattcattcattcattcatacttacatcctt
ccttttattcatcataggaaaatttggatatcttcctttgtcagacaaaggttgatagga
tactcgtgtaaatcagacacgcccctctctacacgccactccctactctctgtacccaac
agtctttgtacaattttactatctatctatctatccatctatctgcaggatctggttcaa
gaggaggatctgctgaaagccttgaaccaggagtttattaacaaagtgaatatggttggt
gttgatataaacgagtgtgtagctcacccccatacctcctacctggtccagtttatcggg
ggcctagggcccaggaagggggcagcacttctaaaaactctcagaggaatgtcaaatccc
aggctagaaaacagacaacagctcgtgacaagttgtcatatgggtcccaaggttttcatc
aactgtgctggttttgttaagatagatactacagctctaggggattctgagcagtatata
gaggtattagacggatccaggatacataatgaagcgtatgagtgggctaggaaaatggct
gtggatgccctggagtatgacgacgacgaggaggaaggtaaccctgcctctgcagtagag
gacatacttaggactggactggactggaccggacctgaccggaccggatatggttcatct
gtatggatctggatctggatcttgatctatattgatattatatctaggttaaagtttgaa
gaacctagttctgaagatatatttgatattatatctaggttaaagtttgaagaacctagt
tctgaagatatatttgatatgacatacaaggaatctccaaaaaccttctatgttggaaaa
cttatgcaggctagagttgaaaggtttcaatacaagcgaccccctcaagaagatctagac
aaagcagctcctgtcaggaaaggggaaactaacctgtgggaatgcccgttctgtgggaag
aatgatttccctgagttgaccgaggtctggaaccattttgatgcggtcaacgactgcccg
ggcaagtgtgtcggggtggcggtcagactggagaatggtattcaaggatttattcatatt
gcggaactatctgatagtacagtactgtgcccggaggaccggatgaagatagggcagaat
atctatgttagaataacaaagattgacgcagaatcctccagagtgcattgtacgagtaag
acctctgctctgcgtgatgtagaggatgcgtttagacaagctaaagatgatcactatgac
agggaagctgagaagaaagaaacagctgctgaggtgaaacagattaaggacaaactgaag
gcctcctacgtcaagcgggtgataactcatccttcattccagaatatatctttcaaggat
gcagagaaactattagaacagatggaacaggttatttttcgaaaaaaattgcatattttt
tatatcaatgtttttcaggtaactgacaacatttaccaacatgttaatgtgcgggaggag
gggaaggtcaacgctttctctctgggatcctccctctggattggcactgaagaatatgag
gatttggatgagattatcgcaaggtttgtaaaccctatggcgagcaacaccagagatatt
atcaattttaagtattacaagaatgggaacaagactatggctgaggagtatcttgtgaag
gagaaaaaaggaaatatgagtaaaattccgtacctactcacacctagtaacgaattccca
ggaaagttcctgctgagctatttaccaaggatcaaggtccatcatgagtatgtgtcagta
accccagatggattcaggttccgaactctaaaccatgattctctcacctccatgattaaa
tggtttaaggaacacttcagggatcctatccctggcaccccctccgcctctcccggcgtt
aggggcacccgaaccccctacggaagccggtcaacgccaagtctccgcccagggataacc
ccaggggcgatgagtatggcgggtgggagtacaccctatggtggaactccagggtatgga
agccgacagaatgcggcttatacgccgacagctaataccccggcgatgacaccattcctg
actccaggtccctctaatactcctcgggggtacagtggtggaactcctaaagccgggttt
ccaggatccaacaccccccgcagtacctacggtgggaacacccctcgagggggtggtagc
acaactccccgtccctctggaagccagaccccatcctccagaccttctgcatcgcccgcc
tacaaggggcgtggcagtggtgctgggaacgcctgggctgccgcggccgagagttgggct
ggtggcgccgggcgccgcacaccacgtggagatgaccgaggacagaagggatactccaca
actccccgctatgaagaccccaggctaactcccaagtatggtggtcgtactccacagcag
gggcactcgcagcagggtcgcagttcagcaggcggcaggggtcctccctcatcacagggt
agtagtagaactcctcagtacgggcggaacgaggcggccggatcaaaccgggataatagg
acaccacgtgggcagttcggggactccactccactctacgatgagtag
DBGET
integrated database retrieval system
