Eurytemora carolleeae: 111708903
Help
Entry
111708903 CDS
T07296
Name
(RefSeq) uncharacterized protein LOC111708903
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
eaf
Eurytemora carolleeae
Pathway
eaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111708903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eaf03019
]
111708903
Messenger RNA biogenesis [BR:
eaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111708903
mRNA degradation factors
5'-3' decay
Decapping complex
111708903
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
111708903
NCBI-ProteinID:
XP_023338177
LinkDB
All DBs
Position
Unknown
AA seq
704 aa
AA seq
DB search
MSNSMLLQPPDSGDFTLEPEDDLDAFNDETFGGAAEWEEEAHEELAQLTEQERIALQSSN
DFFEFGSEDGDSLEPLQKHNGANGAATQLSQLSLEPSQQAPLSIQTSIPAPLPPSIQGGV
YHQGVQPVYQLPQQVQYNLMPPSHFQAVQGVQGVQHVQAVQTVQDPLMDPAIMSFSKPPQ
LPNINQVPTQYTQIQMPRGNFPPTHPPVIQQQQFQHANNSFPQNNSFQPNSYPTPFPANI
MGFKTIQDVEHELLYGPRPVQPVGPSFPPNRGVGHAYPPPRGHPQQQQFHQTNRNLNYPG
MRDRQGHQVYNDINSQRRQENQRQLENQRYQDNINQRYQENQRYQDNSRNQSWNQRSGDN
MNRNRPYDNRDHRQNEEDRYDHHDRQQKRFEREEEWEEDSWRWNEVRNRARDSATRRDLM
PGQVHVQGILRHSREPRLRDPEDDCLGDDAPLFEPTGDPVLDAKLSQEQAELANRCREFD
ETEDEYAGLMSHRDKQFIINIQLSQLKCDNPYVDDYYFTMFTAKQQQRQDPGNTAQLLLS
ELSESGDAETEYIPTQFQNSLGKLQVVTVKAPRQIIDVGVVRCQETSSPVDDTGAVTDPG
LTVVKDQNRAQDYKGTLLQLERVYNILLELESLKLKLSAIPTGAPLREQVTLDLTRQIQI
LIAGLNKPSLIPQYLQVRKGRGLLSRCLKHLPGAAANKICQVFH
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgagtaattctatgctgttgcaaccaccggattccggagacttcactttagaaccggag
gatgatctggatgccttcaacgatgaaaccttcggaggagcagcagaatgggaagaggag
gctcatgaagagctagctcagctcacagaacaggaacgaattgctctccagagttctaat
gacttctttgagtttggctccgaggacggagactcattggagcctttacagaagcataat
ggagctaacggagcagctacgcagctgtctcagctcagcctggagccaagtcagcaggct
ccattatccatccagacctctattccagctcctctacctccctccatacagggaggagtt
tatcatcaaggagttcaacctgtttatcaacttccacaacaggttcaatacaacttgatg
cctccctcccacttccaggcggtacaaggagtacaaggagtacagcatgtacaagcagta
cagacggtgcaagaccctctgatggatcctgcgattatgtccttcagtaaacctccccag
ttaccgaatattaaccaggttccgactcagtatacacagatacagatgcctcggggtaac
tttcctcccacccatcctcctgtcattcaacaacaacagttccagcacgccaacaacagc
tttccacagaacaacagctttcaacccaactcttatccgacaccattcccggccaacatc
atgggattcaaaactattcaggatgtggaacatgaacttctgtacgggccccgtcctgtt
caacctgtcgggcctagcttcccgcccaatcggggggttggacacgcctatccacctcct
cgtgggcacccacagcaacaacagtttcatcaaacaaatagaaacttaaactaccccggc
atgcgggataggcagggacaccaggtttataatgatattaacagtcaacggcgtcaagag
aatcagcgccagcttgaaaatcagcgttatcaggataatattaatcaacgttaccaagaa
aatcaacgatatcaagacaattctcgaaatcagtcctggaatcagcgctctggggataat
atgaaccgaaaccgtccttacgacaaccgtgaccaccgacagaacgaggaggaccgctac
gatcatcatgatcgtcaacagaagaggtttgagagggaggaagagtgggaagaggatagc
tggagatggaatgaggttaggaatagagccagggatagcgccacacgacgagatctgatg
ccagggcaggttcatgttcaaggtatactgcgccactcacgcgagccgcgcttgcgtgat
cctgaagacgattgtctgggcgatgatgcacccttgtttgagcctaccggggatcctgtc
ctagacgctaaactatcccaggagcaggcggagttagccaacagatgtcgtgagtttgat
gaaaccgaagacgaatatgctggattaatgtctcatagggacaaacagtttattatcaat
atccagctctcacagttgaaatgtgataatccatatgtagacgattactacttcaccatg
tttactgccaagcagcagcagcggcaagatcctgggaatacagcgcagctcctactttct
gaactctcggagagtggagatgcagagacagaatatattcctacacagttccagaactct
cttggtaaactccaggttgtcactgtgaaagcacctcggcaaatcatagatgttggagtg
gttagatgtcaggagacaagtagtccagtagatgatactggtgcagttacagacccagga
ttaactgtagttaaagaccagaatagagcccaggattacaaaggaaccctgctccaacta
gaacgtgtctacaatatcctacttgaactagagagtctaaaacttaaactctcggctatc
cctaccggggcacctctcagagaacaggttacattggatctgacccgccaaattcaaatc
ttaattgcgggattaaacaagccctctctcatccctcaatacctacaggtgaggaagggt
cgaggattgctgtctagatgcttgaaacatctaccgggtgctgcggctaataaaatatgc
caggtatttcattag
DBGET
integrated database retrieval system
