Eurytemora carolleeae: 111709392
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Entry
111709392 CDS
T07296
Name
(RefSeq) probable nucleoporin Nup54
KO
K14308
nuclear pore complex protein Nup54
Organism
eaf
Eurytemora carolleeae
Pathway
eaf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111709392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eaf03019
]
111709392
Messenger RNA biogenesis [BR:
eaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111709392
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
111709392
NCBI-ProteinID:
XP_023338811
LinkDB
All DBs
Position
Unknown
AA seq
566 aa
AA seq
DB search
MAFSGGSTFGGFGAPAAQPSTFGGFGAATSQPSTGFSGFGAATSQPSTGFGGFGAATSQP
STGFGGFGTATSQPSTGFGGFGAATSQPSTGFGGFGAATTSQPSTVFSGFGAAATSQPST
GFGGFGAATSQPSTGFGGFGAAATQASTGFGGFGSTTSQPSTFGGFGTTTSQPSTGFGGF
GTTTSQPSSGFGGFGSFGSSTAAKPTGFGTTGGMFGGAGTGLSFGQPQQQQQQPQQTQVN
NAIFFLRASWGFGKAYYSNSAQPIQIKPENPFCRFKSIGYSAMPQQDDKEGLVGLMFKKK
QAELEAGKPQITASLTQTLGNRQNMKINIENIKSSESELSEVVVSVDESLQTGGVRRIPA
SELSAFLNQTMQVQSLKNLGVEMVIPQVKITEEDLKEYLASPPAGVDPRLWKQAQLDNPD
SKSFIPVPIIGFKALYQRIKIQENQSKSHQGRLDCIAENISELQKKNQNTLAALAEAKRK
QLELSHRYVKVTVQNVCLLQVRLQSQSSVLSGNEKYTLDQFAVSDVKSVLRDQQQAIQAL
VSVIKEDMKDLNIMVDGLSASDGSHQ
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggcatttagtggtggttcaacttttgggggattcggagcccccgctgctcagcccagt
acctttggtgggttcggtgcagcaacttctcagccaagcactggcttcagtggttttggt
gctgcaacttctcagcctagcactggatttggtggatttggggccgccacttctcagccc
agcactggttttggcgggtttgggaccgccacttcccagcccagcaccgggttcggggga
tttggggctgcaacttctcaaccaagcaccggctttggtgggtttggggcggcaaccact
tctcagcccagtactgtcttcagcggctttggcgcggcggccacttctcagcctagtact
ggatttggtggatttggagctgccacttcacaaccaagcactgggtttggaggatttggg
gcagcggcaactcaagctagtaccgggtttggcggatttggctcaactacttctcagcca
agcacatttggaggatttggaacaactaccagtcaacccagcactgggtttggaggattt
ggaacaactaccagtcaacccagctctgggtttggaggatttggaagttttggttccagc
acagctgccaaaccaacaggatttggtacaacgggtggaatgtttggtggagcaggaact
ggacttagtttcgggcaacctcaacaacagcaacaacaaccacagcagacccaggttaac
aacgcaatattttttttaagggcttcatggggatttggaaaagcatactattcaaactca
gcccagccgattcaaatcaaacctgagaaccccttctgtaggtttaaatccataggatac
agtgctatgccccagcaagatgacaaggaaggattggtgggattgatgtttaaaaagaaa
caagctgaacttgaagcaggaaaaccccagataaccgcttctcttacccaaactcttgga
aatcgacaaaatatgaaaattaatattgaaaatataaaatcttccgagtctgagttgagt
gaggttgttgtgagtgtggatgagagtttacagactggaggggtcagacggatcccggct
tcggagctcagtgcattcttaaaccaaaccatgcaggttcagtccttaaaaaatctagga
gtggagatggttatacctcaggttaagattacagaagaagatcttaaggagtacctggcc
agcccccctgcaggagttgacccccggctgtggaagcaggcgcagctagataatccagat
tctaaatccttcattcccgttccgatcattggtttcaaagctctgtatcaaaggattaaa
atacaagaaaaccaatccaaatctcatcaaggtcgactggattgtatagcggagaatata
tcggagttacagaagaaaaatcagaacacactcgcagcgctcgcggaggctaaaagaaaa
caactagaactttcccacaggtatgttaaagtgactgttcagaatgtttgtctgctccag
gttcggttgcagtcccagtcctctgtattatctggaaatgagaagtataccctggaccag
tttgctgtgtctgatgttaaatctgtacttagagatcagcagcaggccatccaggcgttg
gtctcagtaatcaaagaagacatgaaagatcttaatataatggtcgatggactgtcagca
tcagatggatctcatcaataa
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