Eurytemora affinis: 111709512
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Entry
111709512 CDS
T07296
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B-like
KO
K12821
pre-mRNA-processing factor 40
Organism
eaf
Eurytemora affinis
Pathway
eaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111709512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eaf03041
]
111709512
Spliceosome [BR:
eaf03041
]
Complex A
U1 snRNP components
U1 related factors
111709512
Complex B
111709512
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
Spherulin4
Motif
Other DBs
NCBI-GeneID:
111709512
NCBI-ProteinID:
XP_023338963
LinkDB
All DBs
Position
Unknown
AA seq
690 aa
AA seq
DB search
MADEPTNWTEHKAPDGRTYFYNSSTKASSWEKPDCLKSSIEMLLAQCPWKEFKAENGKTY
FHNNDTKESTWTCPRELQDIKDRILEEQSNGSGPAGLDSPAQNKSSALDAAMAATLAAYK
PSEPRLPPSIPDIPRPQVYRDKREAMEALKDLLKDKNVPSSANWEVALNLIKKDPRWETL
SKLSEKKQAFNSYKIQKQKDEKEEARLTSIKNREDLERFLFGTDRMSSTIKYYKCEEIFS
DLPLWKSVPEVERREIFSDVVHNLAKKEKEEAKNLRKKNMTRLADILDKMTKIDFQSTWE
QAQQMLLDNPAFADDDELLAMDKEDALITFEDHIRELEKEEDLEKEKEKKRVKRQQRKNR
DAMISLLDELHEQGKLTSMSLWVELYSVISQDSRFHSLLGQPGSTPLDLFKFYVEDLKAR
FHDEKKIIKDILKEKDFDMTADTSFEDFATIVCEDKRSATLDAGNVKLTYNALLEKAESR
EKERLKEEAKRFKKIESEIRSLLVDMNIDDMNSWDDVWNKIKDKSICNSLSEAKAESIFK
DYIRDVEETCQHNHGKKAKKKNKKKKKASESSSESEDRRTSRKKKHRRSDSSESESESEQ
ERKKKRKKKKRARSRSESRSPSSEEESRSRKKKRRTPSRSPSGRRDSPSPPPKREKRSRT
HDSAEEGELSEEELERKRMQLLKQLEQDDD
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgagccgaccaactggacggagcacaaagctccggacggtcggacgtatttc
tacaacagctccaccaaagcgagtagttgggagaaacctgactgtttaaagtctagtata
gagatgttgctggctcagtgtccctggaaggagtttaaagcggagaacggaaagacctac
ttccacaacaacgataccaaggaatcaacatggacctgtcccagagaacttcaggatatc
aaggatcgtatactggaagagcaaagtaatggaagtggtccagctggcttggatagtcct
gcgcagaacaaatcctctgcactggatgcagctatggccgccaccctggctgcctataaa
ccgtctgaaccccgtctccccccttctattccggatattcctagacctcaggtttacagg
gacaaacgagaagccatggaggcactgaaagatctattaaaggataagaacgtacctagc
tccgcgaactgggaggttgccttgaacctgatcaagaaggatccccgctgggagaccctg
agtaaactctcggagaaaaagcaggccttcaactcctataagatacagaagcagaaggac
gaaaaggaagaggcgaggctcacctcgatcaagaaccgagaggacttggaaagatttctc
tttggaactgacaggatgtcctcgacaattaaatattacaagtgtgaagaaattttctcc
gatctccctctgtggaaatctgtgccggaggttgaacgtcgagaaatattctccgacgtg
gttcacaacctggcgaagaaggagaaggaggaggcgaagaatctacggaaaaagaatatg
acccgtctggccgatattctggataaaatgacgaaaatcgatttccagtcaacatgggag
caggctcagcaaatgctcctggataaccccgctttcgccgacgacgacgagcttcttgcc
atggacaaagaggatgctcttataacatttgaagatcacatcagggaactggagaaggaa
gaggatttggagaaagaaaaagaaaagaagagagtgaagagacagcagagaaagaacaga
gatgcaatgatatccctgcttgacgagctacatgagcagggtaaactgaccagcatgtct
ctctgggttgaactttactctgttatatctcaggactctagatttcattctctacttggt
cagcctggctccacccccctggacctttttaagttctacgtggaggacctcaaggccagg
ttccacgacgagaagaagatcatcaaggatattctgaaggagaaggacttcgatatgacg
gcggatacgtccttcgaggattttgcgacaatagtctgcgaagataagaggtcggctacc
ctggacgccgggaatgtgaagctgacctacaacgccctgctggagaaggccgagtctagg
gagaaggagaggttgaaggaggaagcaaaaagatttaagaaaattgagtcggaaataaga
tccctgctggtggacatgaatatagatgacatgaattcctgggatgatgtttggaacaag
attaaagataaatctatttgtaactcattgtccgaggctaaagcagaatccattttcaag
gattatatccgtgacgtggaagaaacttgtcaacataatcacgggaagaaagctaagaag
aagaataagaagaagaagaaagcaagtgaaagcagcagtgaaagcgaagacagaagaact
tcaaggaaaaagaaacacagacgttcagactcgagtgagagtgaaagtgagagtgagcag
gaacgtaagaagaagaggaagaagaagaagagagctagatctaggagtgagagcagatct
ccgtctagtgaagaggagtcacgctccaggaaaaagaagcgaaggaccccctctcgatct
cccagtgggaggcgggactccccgtccccgcctcctaaacgtgagaagcgctcccgtact
catgacagcgcggaggagggagagctaagtgaggaggagctggagaggaagagaatgcag
ctcttgaagcagctcgaacaagacgatgactag
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