Eurytemora carolleeae: 111709752
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Entry
111709752 CDS
T07296
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
eaf
Eurytemora carolleeae
Pathway
eaf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111709752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eaf03021
]
111709752
03019 Messenger RNA biogenesis [BR:
eaf03019
]
111709752
Transcription machinery [BR:
eaf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111709752
Messenger RNA biogenesis [BR:
eaf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
111709752
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCHC
zf-CCCH_2
zf-CCCH_RBM22
zf-CCCH_4
Nab2-like_zf-CCCH_
zf-CCHC_4
zf-CCCH_12
zf-CCCH_DUS3L
Motif
Other DBs
NCBI-GeneID:
111709752
NCBI-ProteinID:
XP_023339416
LinkDB
All DBs
Position
Unknown
AA seq
281 aa
AA seq
DB search
MELLVAPVEHIIFDIEVALGNQLGAQPLPFPGMDKSGAAVCDFYVRSNCSKAASCPFRHI
RGDKTIVCKHWLRGLCKKGDQCEFLHEYDMSKMPECYFYSRFNACHNKECPFLHIDPEAK
IKDCPWYDRGFCRHGPNCRYRHMRRILCVNYLAGFCPAGQSCEQAHPRFELPGPVEQDKS
GKKVVITCHYCGEIGHKVNMCNKMPGEMKEQQQQQSTPAELGKNFMPYTQNQYRMHPMPD
GKPHRFKTLDEITCFKCGENGHFANKCPKGMLAFLSNNSGK
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggaactcttagtagcgcccgtggagcatatcatatttgatatcgaggtcgccctcggg
aaccagcttggtgcacaaccccttcccttcccagggatggacaaatcaggggcagctgtt
tgtgacttctacgtgagatcaaattgttctaaagcagcctcttgtccgttccgacacatt
cgtggggacaaaactattgtgtgtaaacactggttgcgaggactgtgtaagaaaggtgat
cagtgtgagttccttcacgagtacgacatgtctaaaatgcccgagtgctatttctactcc
aggttcaatgcatgtcacaacaaggagtgtcccttcctgcacatagatccagaggcaaaa
ataaaagactgtccttggtatgaccgcggtttctgtcgccacggacctaactgtcggtac
cggcatatgcgccgaatattgtgcgttaactacctcgccggcttctgtccggctggtcag
tcttgtgaacaggcacatcctaggttcgagcttcctggaccggttgaacaggataagagc
ggtaagaaggttgtaatcacctgtcactactgcggagagattggacacaaggttaacatg
tgtaacaagatgccaggagagatgaaggagcagcagcagcagcagtcgacccctgccgag
ctagggaagaacttcatgccctatacgcagaaccagtacaggatgcatcctatgccggac
ggcaagccgcacagatttaaaaccctcgacgaaatcacatgcttcaagtgcggagaaaac
ggacattttgccaacaagtgtcctaagggaatgttagcttttttaagtaataacagtggt
aaatga
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integrated database retrieval system
