Eurytemora affinis: 111710053
Help
Entry
111710053 CDS
T07296
Name
(RefSeq) transcription elongation factor SPT5-like
KO
K15172
transcription elongation factor SPT5
Organism
eaf
Eurytemora affinis
Pathway
eaf03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
111710053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eaf03021
]
111710053
03019 Messenger RNA biogenesis [BR:
eaf03019
]
111710053
Transcription machinery [BR:
eaf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
111710053
RNA polymerase I system
111710053
Messenger RNA biogenesis [BR:
eaf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
111710053
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW4_SPT5
KOW5_SPT5
Spt5-NGN
KOW
KOW7_SPT5
KOW2_Spt5
KOWx_SPT5
KOW6_SPT5
Spt5_N
CTD
KOW1_SPT5
GPKOW_C
DUF3912
Motif
Other DBs
NCBI-GeneID:
111710053
NCBI-ProteinID:
XP_023339836
LinkDB
All DBs
Position
Unknown
AA seq
1075 aa
AA seq
DB search
MSDSEGSSEPGSPRSREAEEGEPEDVEDEQEPEGEDLLDSEEEEEEDDRPNKKAKRSRVN
AHDFIIDEAEVDTDDEEDEDAYRDYADDALDPNEAEEAGQTAADVEARMRQRDRLGQQED
QLDEEAIENYYRNRYNEDTAAIARFGEGGEEMSDEITQQTLLPEVRDPNLWMVKCRIGEE
KVTVLQLMRKMIAYQYEEEPLLIRSVVVPEHVKGYIYIEAFKQTHVKAAIDGISNLRMGI
YQQQMVPIKEMTDVMRVVKEQAGLKAKQWVRCKRGVFKDDLAQVDYVDVASNQVHLRLLP
RIDYGRMRGALRTTASDDLKRKKFKRPPCKLFDPEKIRAIGGEITNDGDFYVFEGNRYSR
KGFLFKNFVMSAILAEGVKPTLSELERFEETPEGLDIDLGAVDKEEIAHKFSNGDNVLVV
EGELQNLQGRVIAVDGSKITIQPKHEDLKDDPLDFQANELKKYFRQGDHVRVIGGRYEGD
TGLIVRVEENMVVLFSDLTMHELKTLPKDLQLCTDMATGVDSMGQYQFGDMVQIDAQTVG
VIVQIQKENFQVLNMHGKVVSMKPAALQRKKAHKDVKALDSEQNQIQVRDVVKCIDGPHS
GRQGEIKHLYRNYAFLHSRMMLDNGGIFVCKCRHLQLAGGGKVTSGGGGGVSNAGGLPGF
MSPRLSSPAHPSQGGGNRGGGGGGFRGGRGGRGRGGNVGRDRELIGQTIKITQGPYKGHI
GIVKDATEATARVELHSKCQTISVDRSRIAAVDSGKSGAGGQFSSYNKTPMHGPSGTPMY
ATPGSRTPMYGSQTPMYDGSRTPHYGSMTPSHGEDGSRTPGRSGAWDPTVSNTPAQTREF
DDYNFDDTSPSPNYNPGTPSAYNQESPSGPYTPTNPGSVYNPQDYSPYQPSPSPSAYQAS
PSPSNSYVPTPSPVGAYQPSPSPSYAAPSPGMGYSPMTPGSSHASSPFHPSTPSRETDIL
NSQDWYSPDIEVLIKSSHSDSNLCGQVGVVRGVIPGHCSVYLHEEERVVTIPAVDLQPVV
PTRGDKVKVILGDEDKDQSGHLLSIDSQEGVVKLDHSGDVKMLQLKYLCKMKSDD
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacagtgaaggaagttcagagccagggtccccgaggtctagagaggccgaggag
ggagaacccgaggatgtagaggacgaacaggaacctgagggagaggaccttctagacagt
gaggaggaggaggaagaagatgaccgccccaacaagaaagctaaacggtcaagggtcaac
gcacacgatttcatcattgacgaggctgaggttgatactgacgatgaagaggatgaggac
gcgtacagagattacgcagatgacgcactggatcctaacgaggcggaggaggcgggacaa
acagcggcggatgttgaggcgaggatgaggcagagagatcgattaggacaacaggaggat
caactggacgaggaggcaatagagaactattataggaatagatataacgaggatacagct
gctattgctaggttcggagaggggggagaggagatgagtgacgagattacccagcagacc
ctactccccgaggtgagggaccccaacctctggatggtgaagtgtaggatcggagaggag
aaggttacagtgctccagctcatgaggaagatgattgcgtatcaatatgaagaggaacca
cttctcatcagatcagtagttgttccggagcatgtcaagggatacatctacattgaagcc
ttcaagcagacccacgtcaaggctgccattgatggtatctctaacctgaggatgggaatc
taccagcagcagatggtccctatcaaggagatgactgacgtgatgagggtagtcaaggag
caggccggtctcaaggctaaacaatgggttcgatgcaagagaggagtgtttaaggatgat
ttggctcaggttgactacgtggatgttgctagtaaccaggttcatcttcgcctcctcccg
cgtattgattacgggcggatgcgaggcgcactgcggacaactgcctcggacgatctaaaa
cggaaaaaatttaaacgcccgccgtgtaaactattcgatcccgagaagattcgagcaatc
ggtggagagatcacgaacgatggagatttctacgtgttcgaaggaaaccggtattctagg
aagggattcttgttcaagaactttgttatgagtgctatactagcagagggagttaaacct
acactcagtgaactagagaggtttgaagagacccctgaaggattggatatagacctggga
gctgtggataaggaagaaattgcacacaagttcagtaatggagataatgttcttgttgta
gagggagagttgcagaacttacagggtcgagttatagctgtggatgggagtaagattact
atacagcctaaacacgaagatcttaaagatgatcccttggacttccaggctaatgaactc
aagaaatacttcagacagggcgaccatgtgcgtgtaatcggaggaaggtatgaaggtgat
actggtctgattgtcagggttgaagagaatatggttgttctattctccgatcttactatg
cacgaacttaaaacccttcccaaggatttacaactgtgtacggatatggcaactggtgtg
gacagtatgggacaatatcagttcggagatatggtgcagatagatgcacagacagtcggg
gttattgtgcagattcagaaggaaaacttccaggtgttgaatatgcacgggaaggtggtg
agcatgaaacctgctgctctacaaaggaagaaagcacacaaggacgtcaaggcactcgac
agcgagcagaatcagattcaggtgcgtgatgttgtaaaatgtattgacgggccacactct
gggcgtcaaggagaaatcaagcatctgtatcgtaactatgccttccttcactccaggatg
atgcttgacaacggcggaatattcgtctgcaaatgccgccatcttcagttagccggcggt
ggtaaggttactagtggcggaggtggcggagtgagtaacgctggaggattaccaggtttt
atgtcgcccaggctttcaagccctgctcatcccagccagggcggaggaaacagaggaggg
ggcggaggtggattccggggaggccgaggaggacgtggtcgcggcggaaatgttggaaga
gatcgagaattgatcggacaaactatcaagattactcaaggtccttacaaagggcatatt
ggaatcgttaaggacgctactgaagctacagctagggttgaactacactcgaagtgtcag
acgatctccgtcgatagatcccgtattgcagcggttgactctggcaagagcggagcagga
ggacagttctcctcctacaacaagactccgatgcacgggccctccggtactcctatgtac
gcgacaccgggaagcagaactccgatgtacggctctcagacaccgatgtacgatggttca
aggactccgcactacgggagcatgactccaagtcatggtgaggacggatctagaactccg
ggtagatccggagcttgggatccaactgttagtaacactcctgcgcagactcgtgagttt
gatgattacaacttcgacgacacttctccaagtccgaattataatcccggtactccatcg
gcatataaccaggagtcccctagcggaccttatactccaactaatcccggaagtgtgtac
aacccacaagactactccccttaccaaccctccccctccccttcagcataccaggccagc
ccatccccaagcaacagctatgtacctactccctcccccgtaggagcatatcaaccctcc
ccctcccccagctacgctgctccctcccccgggatgggatactctccgatgactccgggt
tcaagccacgcctcttctcccttccatccttcgactccgtcccgtgaaacggatattctc
aactcccaggattggtattctccggatattgaagtactgatcaagagttctcacagtgac
tccaacctgtgcggtcaggttggggttgtacgtggtgtaatcccgggtcattgctcggta
tatctacatgaagaagaaagggttgtgaccatccctgcagttgatcttcagcctgttgtt
ccaacacgaggagataaggtgaaggtcattctcggagatgaagacaaggatcaaagcggt
catcttctctctatcgattcacaggagggtgtagtgaaactggatcactcaggagatgtt
aaaatgttgcaactgaaatatctctgcaagatgaaatctgatgattaa
DBGET
integrated database retrieval system
