Eurytemora affinis: 111710384
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Entry
111710384 CDS
T07296
Name
(RefSeq) coatomer subunit alpha-like isoform X1
KO
K05236
coatomer subunit alpha
Organism
eaf
Eurytemora affinis
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
eaf04131
]
111710384
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
eaf04147
]
111710384
Membrane trafficking [BR:
eaf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
111710384
Exosome [BR:
eaf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111710384
Exosomal proteins of bladder cancer cells
111710384
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
TPR_COPA_B
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
EIF3I
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_RFWD3
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_SPT8
NBCH_WD40
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
111710384
NCBI-ProteinID:
XP_023340231
LinkDB
All DBs
Position
Unknown
AA seq
1236 aa
AA seq
DB search
MLTKFETKSPRVKGLSFHPTRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGVDFH
KQQPLFVSGGDDYKIKVWNYKQRRCIFTLLGHLDYIRTTVFHHEYPWILSASDDQTVRIW
NWQSRNCISVLTGHNHYVMCAQFHASEDLIVSASLDQTVRVWDISGLRKKSVAPGPGGLE
DHLKNPGATDLFGQADAVVKHVLEGHDRGVNWASFHPTMPLIVSGADDRQIKLWRMNDNK
SSSLGPGHSANIKNAWEVDTCRGHYNNVSCSIFHPRQELILSNSEDRSIRVWDMSKRNCL
HTFRREHDRFWVIAAHPTLNLFAAGHDAGMVVFKLERERPAHAISGNILYYVKEKYLRKL
DFTTARDTAVMQLRGGSRSPIYSMSYNAAENSVLLSTRATNTENSTYDLYTISEDGDSSH
AAEGKRSSGLTSIWVARNRFAVLDKSHSLVIKNLKNEVTKKLTIPNCDEIFYAGTGMLLL
RDTDAVTLFDVQQKRNLGNVKIPKCRYVVWSADMSLVALLSKHLVTICTRKLEVLCSVHE
NTRVKSGTWDDSGVLIYTTSNHIKYAITNGDHGIIRTLDLPVYLTRIKGSQVFCLDRECK
PRILNIDPTEYKFKLALINRKYEEVLHMVRNAKLVGQSIIAYLQQKGYPEVALHFVKDEK
TRFGLALECSNIEAALEAAKSLDDKDCWEKLGEAALLQGNHQVVEMCYQRTKNFDKLSFL
YLITGNLEKLKKMMKIAEIRKDTSGHFQNALYLGDVQERVKVLNGCGQNSLGYLTAMTHG
LTEEAEKIKEGVDVEKTPLPSPAPGARLLQPPAPIAQSEQNWPLLTVSRGFFDTAMMTAK
KSEGIAVGLAVEDDGEAEGEWGEEADLGLDDDGEVKDDFQDAEAGDEEGDGWAPDEDDLE
LPADLEPVPVAAGDGEDGYFVAPTRGVPPTQHWTNNSSLPIDHILAGNFESAFRLLHDQV
GVVNFEAYKTHFMTSYSRSRVSVFGSASTPSMYICPQSNWKEANPKNGLPAVGLKLNDLV
SRLQSAYQLTTSGKFGEAAEKFRSILLSIPLLVVESKQDETEALQLRDICSSYLVGLTME
SARKEHPKDTLENQKRVCEMAAYFTHCNLQPVHQILTLRTALNLFFKLKNFKTAGSFARR
LLELGPKPEVAQQTRKILQACDKNPVDEHQLNYDEHNPFDVCAASFVPIYRGAECEVAPL
SQAKYLPQYKGEVCRIDCVSQIGKGTAGLKIRRKVR
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgttgactaaattcgagactaagtctccccgggtcaagggtttatcctttcatccaact
cgtccctgggttcttgcatctcttcacaatggagttattcagctatgggattaccgaatg
tgtactttgctggagaaatttgacgaacacgacggtccagtccgcggcgtcgacttccat
aagcaacagccactgttcgtctccggtggagacgattacaagataaaggtttggaattac
aagcagcggcgttgtatctttacacttctgggtcatcttgattatattcgtacaacagtt
tttcatcatgaatacccttggatactctcagcttcagacgaccagactgtacgaatctgg
aactggcaatctagaaactgtatttctgtgttgaccggacataatcactacgtgatgtgt
gcacagtttcatgcttcagaggatctgattgtctctgctagtcttgatcagactgttagg
gtttgggatatatccgggttgaggaagaagtctgtagctccgggtcctggtggactagaa
gatcatttgaagaacccaggagcaaccgatctatttggtcaggctgatgctgtggtgaag
catgtccttgaaggtcatgaccgaggagtgaactgggcatccttccatccaaccatgcct
ctgattgtctccggcgctgatgaccggcagattaaactctggaggatgaatgacaacaag
agctccagtttgggccctggacactcagcaaacattaaaaatgcttgggaggtagataca
tgccgtggacattataataatgtcagctgctccatctttcatccacgacaggagctaatc
ttgtctaacagtgaggatagatcaatcagggtatgggatatgagtaaaaggaactgtctt
catactttccgacgcgaacacgaccgattctgggtgattgctgcgcatccaaccctaaac
ctgttcgctgccggtcatgatgctggtatggttgtgtttaagcttgaacgtgaacgacct
gctcacgctatctctgggaatattttgtactacgtcaaggagaagtatctaaggaagctt
gattttacaactgcccgtgatacagctgtgatgcagctacgcggaggttctaggagtcct
atttactccatgtcctacaatgcagcagagaactcggttctattgagtactcgagctact
aacacggagaacagtacctacgatctctacaccatctctgaggacggagacagctcccat
gccgctgaggggaagaggtcgagtggattgacctccatctgggttgccaggaatagattt
gccgtcctcgacaaatcccactccctagtgataaagaacctgaaaaacgaggttaccaag
aagcttactatacccaactgtgacgagatattctacgctgggacgggaatgctcctgttg
agagataccgacgccgttactctgtttgatgttcagcagaagaggaacctgggaaatgtg
aagatccccaagtgtcggtatgttgtctggtctgcagatatgtccctggttgcgcttctc
tcgaagcaccttgtcacaatctgcaccaggaaacttgaagttctctgctctgttcatgag
aacactagagttaaatctggaacctgggacgacagcggagtgttgatctacaccacctcc
aaccatatcaagtatgcgatcaccaacggagatcatggaattatccggaccttagatcta
cctgtttatctcactaggattaagggaagccaggtcttctgtctagaccgggagtgcaag
cctaggatcttgaatatcgatcctactgaatataagtttaaactggcgctcataaaccgt
aaatacgaggaggttctgcatatggtgaggaatgccaagcttgttggacaaagtattatt
gcctatcttcagcagaaagggtatccagaggttgccttgcactttgtcaaggacgaaaag
accaggttcggccttgctcttgagtgtagcaacattgaggctgctcttgaggctgccaaa
agcttggacgacaaggattgttgggagaagcttggtgaagcagctcttctccagggtaac
catcaagtagtagagatgtgctaccagagaactaaaaactttgacaagctctctttcctc
tacttgatcacagggaacctggagaagttaaagaagatgatgaagattgctgagatcaga
aaggatacatcaggacacttccagaacgcactttatctcggagatgtccaggagagggtt
aaggtactgaatggctgtggacagaacagtctaggatacctcactgccatgactcacgga
cttacggaggaagcagagaaaataaaggaaggagttgatgttgagaaaactcctctaccc
tcccctgcacccggagctaggttacttcaacctcctgctcctattgcacagtctgagcaa
aactggcctctattgacagttagtcgaggattctttgacaccgctatgatgacggctaag
aagtctgaaggtattgctgtaggtctggcagttgaggatgacggagaggctgagggagaa
tggggagaagaggctgatcttggtcttgatgatgatggtgaggtgaaagatgatttccag
gatgctgaggctggtgatgaagaaggagatggttgggctcctgatgaggatgatctagag
cttcctgctgatcttgaacctgttccagttgcagctggggacggagaggacggatatttt
gtggctccaacccgcggagttcctcccactcagcactggaccaacaacagttctcttcct
attgatcatattcttgccgggaactttgagagcgctttccgtctgctccacgaccaggtt
ggagttgtcaacttcgaggcttacaagactcactttatgaccagttactccaggtccaga
gtaagtgtttttggttcagcctccactcccagcatgtatatctgtcctcaatccaactgg
aaggaggcgaaccctaagaacggactccctgctgttgggttgaaacttaatgatttggtt
tctcgtcttcagtctgcctaccagctcaccactagtggtaagttcggagaagctgcggag
aaatttagatcgatccttctctccatccctctcctcgtagttgaatctaaacaggacgag
actgaagctctgcagctccgagatatctgtagcagttatctagttggattaactatggag
agtgcaagaaaggagcatcctaaggataccctggaaaaccagaaacgtgtttgtgagatg
gctgcatattttactcactgcaaccttcaacctgtccatcaaatcctaaccctgcggact
gctctgaatctgttctttaaactgaagaacttcaagactgctggatcctttgcccgtcgt
ctgctggagctcggacccaaacccgaggttgctcaacagacaagaaagatcctgcaggcc
tgcgacaagaacccggtcgacgagcaccagcttaactacgacgagcacaatccctttgat
gtttgcgcggccagctttgttccgatctaccgtggagctgagtgcgaggttgctccgctc
tcccaggcgaaatatcttcctcaatacaaaggagaggtctgcaggatagattgtgtcagt
cagatcgggaaaggaactgctggacttaagatcagacgcaaagtccgctga
DBGET
integrated database retrieval system
