Eurytemora affinis: 111710432
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Entry
111710432 CDS
T07296
Name
(RefSeq) DNA mismatch repair protein Msh6-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
eaf
Eurytemora affinis
Pathway
eaf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
111710432
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eaf03400
]
111710432
DNA repair and recombination proteins [BR:
eaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
111710432
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
111710432
NCBI-ProteinID:
XP_023340289
LinkDB
All DBs
Position
Unknown
AA seq
1267 aa
AA seq
DB search
MQTSLLSFFTRTPKGSPQQPKGSPKTPLGSKVSNGKGDQNSPLSSKSANAKVGANPKYPP
GSLVWSKLQGYPWWPSLVCDHPTEKRSFRKQELHVQFFDDPITRAWVNIDLIKPFNEKVG
RGEGADQTWDKGLKDAEKVAELSNEERLDLLLVQHLPSDDEWEEEVEEEVSPGSKENKPE
GEPVKKRRRIIELDSDDSGDDETFNPTKKDLQELEEEDHVTSDEDEAESEPEPSSEDGSP
VKSGIKRKRKENSGPKKKPNLIKPVSTPVSKFAKMMAGGSSTPGLSSLSPSIFGSKSDSS
PLPSVGESTKKKLAMFGATAPEPEDDVKSFKHTELPFLRPENIRDADGRKKTDPDYNPRT
LKVPDSFLKDQSPGQRQWWELKSKLFDVVLFFKMGKFYELFHMDADIGVAELNIIYMRGD
VAHAGFPEIAYGRYAATLVEKGYKVARIEQTETPADLEERSKNAPRGVKVDKVVRREVCQ
MSSKGTRVNNYLDSDNFEGDPRYLLAICENSGATPTFGVAFVDTTIGIFHLGQFSDDKNL
SRLRTLTAHFPPAEILFEKGGLSNTTTTFLTSSLPGARREGLKRGSEFWESDKTLNVLVE
KEYFTGEGDEMVWPEALQEFIDCSDSKVAHAVSSGELAVRALGAIVWYLSAGYLDQELLS
LKKFEGYVPVDFSVPPPAEKIKTGPTGKYMVLDGITIRNLDLVSGPTGDTEGTLLSRLDT
CLTAMGKRTLRHWVVTPLLQPSAIKQRQTAVKELMQLGEAGEIRTQLKKVPDLERLLSKI
HTAGDMKRNQSHPDSRAVMFDGNVYSKRKIMDLLICLDGFKKSMEIMSLLQGKEFESKVL
KNITQFESDGGEFPDMSELLQFFDNAFDHNSARKEGKIIPSEGVDSDLDSANQELKQIKK
EMDVYLKEQKTHFGCEVKYWGTGKNRYQLEIPVERVKKAGEEYTLASGTKKVKRYVTEET
KEFLLRQQAGEACKEAALQDIQRKMFFQFSKHANILRKAIGCISLLDSLLGLAGYSSSLE
TSCFPEISEDASQSIDIKEGSHPCLDLKGEAFIPNDTLLGGDRTLIILTGPNMGGKSTLM
RQTGLLVILAQIGCQVPASEMTLTPVDRIFTRLGAQDNIIGGESTFLVEMQETSTILQHA
SQHSLVLIDELGRGTATYDGTAIAGAVVTALAKRGCRTLFATHYHSLDLEQTKNVFSAHM
ACMVENEGHEDITQETITFLYKLVDGPCPKSHGFNAAKLAGLPDSIIRRGFAKALEFEEN
EKKNRSV
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacgtcattactaagttttttcacccgcaccccgaaagggtctcctcagcagccc
aagggatctcctaaaaccccccttggatctaaagtaagcaacggaaagggagatcagaat
tcgcctctatcatctaaatctgctaatgccaaggttggcgccaacccaaaataccctcca
ggttccttggtttggtctaagctacaaggttacccttggtggccgagtcttgtctgcgat
catccgacagagaaacgatccttccgcaaacaagaacttcacgttcagttcttcgacgat
cccatcacccgggcctgggtcaacatagatctgataaaacccttcaacgagaaggttggg
aggggagagggagcagatcagacttgggataaagggttgaaggacgcagagaaggttgcg
gagctgagtaatgaggagaggttggatctactcctggtccagcatttacctagcgatgat
gagtgggaggaggaagttgaagaggaagtgagtcccggaagtaaagaaaacaaaccggaa
ggagaacctgtcaagaagaggagaagaattatagagctggacagcgatgacagcggagac
gatgaaacctttaacccgaccaagaaggacctccaggagcttgaggaggaggatcatgtg
acctcggacgaggatgaagcggaaagtgaacctgaaccttcatccgaggacggatctcca
gtaaaatctgggataaagaggaagagaaaagagaactctggtccaaagaagaaacccaat
ttgatcaaacctgtttcaactccagttagtaaatttgcaaagatgatggcaggaggctca
tctactcctggtctgtcctctctctctccgagcatctttggttccaagtccgactcctcc
cctctgcctagtgtaggcgagagtactaagaagaaacttgccatgttcggagctactgct
ccggagccggaggatgatgttaaaagctttaaacacaccgagcttccctttctccgaccg
gaaaacatcagagatgccgacggacgaaagaagacggatcctgattacaatcccagaact
ctcaaggttccagattcgttcttgaaagaccaatctccgggtcaaagacagtggtgggag
ctgaaatctaaacttttcgatgttgttcttttcttcaagatggggaagttctacgagctg
ttccacatggacgccgacatcggggtagcagagctcaacattatctatatgcgaggagac
gttgcacacgccgggttccctgagatagcttacggaaggtatgctgctacactggtggag
aagggttacaaggttgcaaggatagaacagactgaaactcctgcagatcttgaggaacgg
tctaagaacgctcccagaggagtgaaggttgacaaggttgtacggagagaggtttgtcaa
atgagcagcaagggaacacgagtcaacaattatctggacagtgataacttcgaaggggat
cctagatatcttctcgctatctgcgaaaactccggagcaaccccaaccttcggggtcgct
ttcgtggacaccacaattggtatcttccaccttggacagttttcagacgacaagaatctc
tctagattgagaactcttacagctcatttccctccagcggagatattgtttgagaagggt
ggactctccaacaccacaaccaccttccttacttccagcctacccggagccaggagggag
ggtttaaagagaggttcagagttctgggagtcggataaaactctaaatgttcttgtagag
aaggagtattttactggagagggtgatgagatggtttggccggaagctcttcaggagttt
attgattgctctgactccaaggttgcgcacgcagttagttcgggagaactcgctgtgcgc
gctctaggagcaattgtgtggtatttaagtgcaggatatttggatcaggagcttcttagc
ttgaagaagtttgaaggatacgttcctgtagatttctccgtcccacctcctgcggaaaag
attaaaactggacccacaggaaaatatatggttctagatggaataactattcgtaatctc
gatctggtctcgggtcctactggagatactgaaggaacactactttcgaggttggacaca
tgtctaactgctatgggaaaacgtaccctgagacactgggttgtgacccccttgctccaa
ccctccgctatcaagcaacgccagacagccgtgaaggaattaatgcagttgggagaagcc
ggagaaattcgaacccagctcaagaaggttccagacctggagagacttctctccaagatt
cacactgctggagacatgaagaggaatcagtcccatcctgactccagggctgtcatgttt
gacgggaacgtgtacagcaagcgtaagatcatggatttactgatctgtcttgatggattc
aagaaatctatggaaatcatgagtttacttcagggaaaggagtttgaatctaaagttcta
aagaacataacacagtttgagagtgatggaggtgagttccctgatatgtcggagctcctt
cagttcttcgacaacgccttcgaccataacagcgccagaaaggaggggaagattatccct
agcgaaggagtggattctgatcttgactctgctaaccaggagctcaagcagatcaagaag
gagatggatgtgtacttgaaggagcaaaaaacacatttcggatgcgaagtcaagtattgg
ggaactggaaaaaacaggtatcagcttgagattcctgtagagcgtgtaaagaaggcaggg
gaggagtacaccctcgccagcgggaccaagaaggtcaagaggtacgtcacggaggagacg
aaggagtttctgctccgtcagcaggccggagaagcttgtaaagaagcagctcttcaagat
atccagaggaagatgttcttccagttctccaagcacgcgaatatcctgaggaaagctatt
ggttgcatctctctcctggatagtttactcggcctagcaggatatagtagtagtctggag
actagttgcttcccggagatatccgaggatgcgtcccagtctatagatatcaaggagggg
agtcatccctgcttagatcttaaaggagaggcgtttatacctaatgatactttgctggga
ggagacagaactctcatcattttaaccggacctaatatgggtggtaaatctaccctgatg
cgacagactggtctgctcgttatcctggctcagataggttgccaggttccggcctcagag
atgaccttgactccagtagatcgtatctttactaggttgggagctcaggataatattata
ggaggagagagtacattccttgtagagatgcaggagacgagcacaattctccagcacgcc
agtcaacactctcttgttcttattgatgagctgggtcgtggaacagctacatacgatgga
actgccattgctggtgccgttgtgacagccctggctaaacgtggctgtagaaccctgttt
gccacccactaccacagcttggacctggagcagaccaagaacgtgttctccgctcacatg
gcctgcatggtggagaacgagggccacgaggacatcacccaagagacgatcactttcctg
tacaagctcgtggacggaccctgtcccaagtcccatggtttcaacgcggccaagttggcc
ggccttccggactccatcatcagacgagggttcgccaaggccctagagttcgaggagaat
gaaaagaagaacagaagcgtttaa
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