Eurytemora affinis: 111710744
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Entry
111710744 CDS
T07296
Name
(RefSeq) protein SMG7-like
KO
K14409
protein SMG7
Organism
eaf
Eurytemora affinis
Pathway
eaf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111710744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eaf03019
]
111710744
Messenger RNA biogenesis [BR:
eaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
111710744
mRNA cycle factors
Common to processing body (P body) and stress granule
111710744
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_8
TPR_2
TPR_12
Motif
Other DBs
NCBI-GeneID:
111710744
NCBI-ProteinID:
XP_023340631
LinkDB
All DBs
Position
Unknown
AA seq
1014 aa
AA seq
DB search
MEEKNIGIAKKEDRLERSNQKEIEMKGEEEEEEQEQGRKVPNNLESLQLAKRAEDLAKTV
NGKKELYRDTETWSTHQELAKILKKIIITDLDFALDRKLEQLLWNSCFKNYISHLQVKSK
DRRAKDRGSAQVTLSWFLENASGFYILLLEEIRFAFSLSIPFLHSGSPYGTTGEKLVGEE
VFPPSPASCNYICQYCLVHLGDIARYRNNIQQAETFYRHAISMAPSSGQPYNQIAILEAN
RSNKLSTVYFYVRAVSLSFPFPAAFINLNKLLSRLAGLGEAEEREPRERTAKVTQHTFIP
LFLRVHGLLQHSVHLSMCVKFCRLLTDSLTSLIATDSLSTWQLLQMISINMWVWDQASVS
DDREQLSREEKVSMAVCADLQAAVLSSSLLPVYTVKKGDDLVDYFALPAVRILLEWILLH
PEVLREKGFTSRPQIWPSLARLLNEVQILLPGYDCDTLKDYPLPEEYDLQAFKPIAASFT
SLNFKQVNSGQIYDKDELAHLRFYRLQMIGEKLSEDPYLLLEKDGEEWSALKRDYIQVED
EDLSEALDTEKGENDSSEEDEDESDTIQWEEQNSSGSKGILKSKPAVQDPGTVASAPRYR
ARQNVAMAAILRANTISVPDQDEEKEDEEKQKRVMFKTPSPVIVQANTKTSGKVESKTNA
AKSTNGGTSKASSAKPEAGGGVPLSVSEFDFTKPPPSLHSNYRPPKLSSPKTEDKLGKNI
VKTDLSVSGINPLTSTTSRIGSGLTWDHQSSPDPDKSSHSVLGPSQPVGSSPGGPSQIGG
PSFTYNSGAFQQGFGLGVTGRQPEPPPGGQGLLGQVGFGHSSLGQGVAPGPFGQGPLAQG
PLGQGPLAQVYSFDRLEEKFPPLGQSLDRSGAIEYKSGFMEYKSTNMDSTSSLYSSMQGL
GLGWPSTTDQSNQSLFGTLSRSINPSNSPSSPAQLPSSPAHLPSMFSSPALSVGSDPPTY
SLFSGTSWTGSLISGVESPGSLQSLSPSISTSTSTPGSTVAASTIQPEASNSNI
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaagaacataggaatagcgaagaaagaagatcggttggaaaggagtaaccaa
aaagagatagagatgaaaggagaagaagaagaagaagaacaagaacaaggaagaaaggtt
cctaataatctagagtccctgcaacttgctaagcgtgcagaagatttagcaaaaactgta
aatggcaaaaaggaattgtaccgagatactgagacttggtcaactcatcaagaacttgct
aaaatcctgaaaaagattatcatcactgatctggactttgctttggacagaaagctggag
cagctgctttggaactcctgcttcaaaaactatatttctcatctccaggttaaaagtaag
gatagaagagctaaggacaggggtagtgctcaagtgacactctcatggttccttgagaac
gcttctgggttctatatccttcttctagaggagattcgatttgctttttcactctccatt
ccatttcttcattctggtagtccatatggtactactggagagaagttggttggggaagaa
gtattccctcccagtcctgcctcatgcaattatatctgtcaatactgccttgttcatctt
ggagatatagctcggtacaggaacaatatccaacaagcagagacattctacaggcatgcc
ataagtatggcgccctcaagtgggcaaccttataaccagatagctatcctagaagcaaat
cgaagtaacaagctgtccacagtctatttttatgttagagctgtaagtctaagctttcca
tttcctgctgccttcataaatctgaataagcttctctcccggctagctggccttggagaa
gctgaagagagagagcccagagaacgaacagctaaggttacccagcatacatttatccca
ctcttcctgcgagtccatgggttacttcagcatagtgtacatctcagcatgtgtgtcaag
ttctgtagacttcttacagactctttaacttctcttatagctacggactcactttctacc
tggcagttacttcagatgatctccattaatatgtgggtttgggatcaagcttcagtgtct
gatgaccgggagcagttatctagggaggaaaaggtgagtatggctgtgtgtgctgacctg
caagctgcagttctgtcctcctctcttttaccagtttacacagtcaagaagggagatgac
ttggtagattactttgctctgcccgcagtgagaatccttctggaatggattctacttcac
cctgaagttctaagagagaaggggtttaccagccgtccacagatctggccaagcttagca
agacttctcaatgaggttcaaattcttctacctggatatgattgtgatactttaaaagat
taccccttgcctgaagaatatgaccttcaagcctttaagccaattgcagcatcatttact
agcctgaacttcaagcaagtaaactcaggccagatctatgacaaggatgagttagctcat
ctaagattttatagactccaaatgattggagagaaactgtccgaagatccataccttctc
ttggagaaggatggagaagaatggagtgctttaaagagagattatattcaggttgaagac
gaggacttatctgaggcccttgacaccgagaaaggggagaatgattcaagtgaagaagat
gaagatgaaagtgacactatacaatgggaggaacagaatagcagtgggtccaaggggatc
cttaaatccaaacctgcggtccaagatccaggaactgttgcaagtgcacccagatataga
gcacggcaaaatgtagcgatggcggccattttgcgcgccaacactatttctgttcctgat
caagatgaagaaaaggaagacgaggaaaaacagaaacgtgtaatgttcaagacgccgagt
cctgtcattgtccaggcgaatactaaaacgtctggaaaagtggagagtaagactaatgcc
gctaaatctaccaatggcggaacttctaaagcgagctccgccaaaccagaggcggggggc
ggagttccactcagtgtctcagagtttgatttcactaaacctccaccaagtttgcacagt
aactacaggccaccgaagttgtcgagtcctaagactgaggataagctggggaagaatatt
gtaaaaactgacttatctgtatccgggatcaatcctctaacatccactacctctaggata
ggatcaggactaacctgggatcatcaatcctctccagatcctgataaatcaagtcattcc
gtacttggtccatcacagcctgtgggctcatcaccagggggtccgtcacagataggtggt
ccatccttcacatacaactcgggcgcttttcaacaaggatttggactcggagttacgggt
cgtcaacctgaacctccaccaggtggacaaggccttctgggacaagttggattcgggcat
agttctctgggacaaggggtagcaccaggtccattcggacagggacccttggcccaaggt
ccactcggacagggacccctggcccaagtttacagctttgatagactagaagaaaagttt
cctcccttgggccagtcccttgatagatcaggtgctattgagtacaagtctgggttcatg
gagtacaaatcaacaaatatggattcaacatcgagtctatactctagtatgcaaggtctg
ggtcttggttggccctctaccacagatcaatcgaaccaatctttatttgggaccctctca
cgttccataaacccgtccaattctccctccagtcccgcccaactcccctcaagtcccgcc
cacctaccatccatgttctctagccccgccctctcagttggtagtgatccgcccacatat
tctcttttcagtgggacttcttggaccggatcattaatttcaggagtagaatctccaggg
tcattacaatcactgtctcctagtatttcaacatctacttctactccaggcagtacagtg
gcagcatcaactattcaacctgaagcatcgaatagtaatatctga
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integrated database retrieval system