KEGG   Eurytemora carolleeae: 111712348
Entry
111712348         CDS       T07296                                 
Name
(RefSeq) negative elongation factor B
  KO
K15180  negative elongation factor B
Organism
eaf  Eurytemora carolleeae
Pathway
eaf03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:eaf00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    111712348
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:eaf03021]
    111712348
Transcription machinery [BR:eaf03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     111712348
SSDB
Motif
Pfam: COBRA1 C2_SHIP1-2_2nd
Other DBs
NCBI-GeneID: 111712348
NCBI-ProteinID: XP_023342697
LinkDB
Position
Unknown
AA seq 590 aa
MFPSNAGGATALPAVAPVALAAPTAGSGGFGLEEIGIPGRDYLREALTSCQDPLKAIEDF
QIENGVLLPSLRPMLPLLDLHGIKRLDFHNSVLEDLRDKLIAQISELGDTEGKEKDKKLR
DLLSKSFPVIQIKEVRPVVMSILKNMSYIEDRYLRFLVRDKELYADCDIEIKRHLWRDNQ
SLFGDEVSPLLSQYIKDKENVLFTHETGSGFFSGSPKSRRQSEVIQKLAEMIGNHVKLYD
MTLQFLRTLFLRTKNVHYCTLRSELLMALHDREVQDVISVDPCHKFTWCLDACIRERNVD
VKRSRELQGFLDAIRRGQEQVLGDLSMTLCDPFAINFLSQSAMKLVNFQVEKEALPRDQP
VLHLLLRMLALGLSAWDMIETQDFREPKIELPLLVQFLPAMMSLIVDDQVRALNYKFPVE
ERDTASIIIDHSGPPPDMYDVQVSQCPIATTMAMQYTLQTTRNKDKIGVMRVLGILAQNI
RGHPFEDAFLHSLVTSLIVMKDEFENEDFCTSVFDEFFFTCINVDNVNRHLLRLLWWIHP
KLPAARTDTLLKVAEPISGVDTVVSLYETLRDKMLSRHSHSPQQDSLTPF
NT seq 1773 nt   +upstreamnt  +downstreamnt
atgtttcctagtaacgcaggcggggcaacggcacttccggccgtagcccctgtggcgctg
gcggcgcctaccgccggctccggagggtttggtttagaggagattggtattcctggacgg
gattatctcagggaagcgcttacttcatgccaagatcctctcaaggcaattgaggatttc
cagatagagaacggtgttctgcttccctcactccgtcctatgcttcctcttctagaccta
cacggcattaaaagattagatttccacaactcggtgctcgaagacctaagggataaattg
attgctcagataagtgagcttggtgatacagaaggaaaggagaaagataaaaaactcaga
gatttgctttctaaaagctttcctgttattcagataaaggaggtgagaccggtagtaatg
agtattctaaagaacatgtcctatattgaggataggtacctgaggtttctagtgagggat
aaggaactgtatgcggactgtgacattgagataaaacgtcatctttggcgggataatcag
tctttgtttggtgacgaagtgtcaccgttgctttcacaatacatcaaggataaggaaaat
gtgctatttacccatgagacaggatctggtttcttcagtggttctcctaagagccggcga
cagtcagaagtaatccagaaattggctgagatgattggaaaccatgtgaaactctacgat
atgacacttcagtttttgcgtacactgttcctgagaactaaaaacgtacactattgtacg
cttagatcggaacttctgatggctcttcatgacagagaagttcaggatgttatctctgtt
gatccttgtcacaagtttacctggtgtttagatgcttgtatcagggagagaaatgttgat
gtgaagaggtctagagaacttcaggggttcctagatgctatcaggaggggacaggaacag
gttttgggagacctgagtatgacattgtgtgatccttttgcgatcaatttcctctcccag
tccgccatgaagcttgttaacttccaggttgagaaggaggcccttcctagagatcaaccc
gttcttcatcttcttctcagaatgttggcactgggattatctgcctgggatatgattgag
actcaggatttcagggaaccaaagatagaactcccgcttcttgtccagtttctcccggcc
atgatgtctctaatcgtcgacgatcaggttcgagcattgaactacaagtttccagtggag
gagagagatactgccagtattattatagatcattcaggacccccgccagatatgtacgat
gtacaggtgtcccagtgtcctattgctacaactatggcaatgcagtacactcttcagaca
acaagaaataaggacaagattggagtaatgcgtgttcttggtatactggcacaaaacatt
agaggtcatccctttgaggatgccttcctgcacagtttagtaacttccttgatagttatg
aaggatgagtttgaaaatgaggatttctgtacctcagtgtttgatgaatttttctttacc
tgtattaatgttgataatgttaacagacatctgctgagattgttatggtggattcatccg
aaacttcctgcagcaagaactgatacacttttaaaggtggctgaacctatctctggagtt
gatactgttgttagtctttatgaaactctacgggacaaaatgttatctcggcattctcac
tccccccaacaagacagtttgacaccgttctag

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