Eurytemora carolleeae: 111712967
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Entry
111712967 CDS
T07296
Name
(RefSeq) uncharacterized protein LOC111712967
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
eaf
Eurytemora carolleeae
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eaf03000
]
111712967
03036 Chromosome and associated proteins [BR:
eaf03036
]
111712967
Transcription factors [BR:
eaf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
111712967
Chromosome and associated proteins [BR:
eaf03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
111712967
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
POB3_N
RRM_1
HMG_box
HMG_box_2
HMG_WDHD1
SSrecog
RINGv
DUF2990
RRM_10
zf-RING_2
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
111712967
NCBI-ProteinID:
XP_023343500
LinkDB
All DBs
Position
Unknown
AA seq
1516 aa
AA seq
DB search
MDILEYPSMSSEVRGVMSPGILKLTDAKIIFVHSKSGRKDTVKSDDIDLVNWQRIAGVWG
IRIFTKDGMLHRFAGFKEAERDRVANHFKSSYKLEMLDKELSVKGWNWGTANFNGSVLNF
EVGKHDAFEIPLNYVSHCANAKNERFHIPSSELAGETDPAEAFKDHIVQKANIATTSTGN
DIASFREIHSLSPRGRYDIKFFQTFIHLHGKTFDYKIPVSTVIRLFLLPHKDQRQMFFCV
NLDPPIKQGQTRYYLLVLSFMQDEETELELEITDEELKDKYDGKLEKEMKGPTFQLVSKL
MKVLVNKKITVPGSFVGHSGTPAISCSFKAASGFVYPLERGFIFVYKPPIFIKYEDVQHV
NFARSGGSNRSFDIEVHTRGDTVYTFSSIEKEEYGKVYDFLKSKKINVKSTGKMDASKIQ
LDADIDHNLAKVKADAVSSDDSASMSSDDEDFNPDELEAKSAKEEYDSDPSDTGSDTGDE
NFSGSEGEQEKKRAEKAEKKLKKAEKKKTSKPSGERTSKKKKKTKLPGQPKKPMSAYFMW
LNEEGREKIKTENPGISVTEVGKKSGEIWREMDGEEKKIWEGKAKAAKEKYDDEYKEWLE
TGGSEAIKQAKKEGKAAKRAAASGGTPKKKSSGSTKSKSAPSGGTGGGFKSAEFIKSDGS
TDDDDEEKEKKSSDKSDQEMASDSDKNFNGWVSNNINPRVPPDNSFKMSREGALWIGGVE
EYMDEAFLMNAMKQSGEDNVISVKVMRNKNNGAGYGFINFPNDQMALTAMHRLNGKMIPN
SRPPARYKLNHGSNRNLPGEKNHSIWVGDLSTEIDDLLLYKFFSARFQSVVSAKIILDEN
GGSKGFGFIRFGNETEQLAALTSMQGISGLGEKPIKVSIAVQKAKDPSAQGMQYPPSGGQ
YGGTLGMGGEYGANYNQYNHYWSNMAAWQQYQNYYQQYPDQGEVPVNPPLPSGPSQPDNQ
NHVGEDEPVSILEGPLDQPVEHSVSLDIHKLNSDALNVSIDRVVEELKENIYDQIRTIRD
PEKDNNLEELNVVDENLITVYPFGCSGDKFVANIEFVPTVQHCLCIRTKLERTLVPGTVK
LDIFVKSGTHSTVEDINKQINDKERVSAALENPNLRETVEMRKNRFRNKMENFRFNHQSP
PSMTIRPQSEETGSSSDNRHTRDDSSSALSRKEDEWDPTEEDELEDKDERSENEEHYCDE
YSTDYENDDIVQQHAAIHAGLVDDEDEAEEEEEEEEEDDDDEEEEEEDDDKQCWVCFANV
EDDPTAGWVHPCRCSGTTKWVHQVCIQRWIDEKQKGDNFAGVSCPQCGTGYLIGFPPSGA
IMKVLDGADLLVGRLCPVVAGGVIVGGVYWSCVTFGAVTIMQIAGHDEGWNLMERADPLL
LLVSLPLIPVGLVLGKMIKWQDPIIKVLRLYLPKVPLTSYLLPAFASVPTREGSGAAASI
PPSTDPVSVTRTFCGALFFPTIATFLGGTLFPETGSPLKRAALGGLTFVLIKGGLKIYHK
QHLYIRQCKRIVLDYS
NT seq
4551 nt
NT seq
+upstream
nt +downstream
nt
atggatatcctggagtatccgagtatgagctccgaggtccgcggggtcatgtcccccggg
attctcaagcttacagacgccaagattatattcgtacactcaaagtcgggacgaaaagac
accgttaagagtgatgatatcgatctggtaaactggcaacgtattgccggtgtctgggga
ataagaatattcactaaagatggaatgcttcacaggtttgctggttttaaagaagctgag
agggatagggtagcaaaccattttaaatcctcatacaaactggagatgcttgataaagaa
ctcagcgtcaagggttggaattggggaacagctaactttaatggttccgttctaaacttt
gaagtcgggaaacatgatgcttttgagatccctctcaactatgtttctcactgtgcaaac
gctaagaatgagaggttccatattccttcaagtgaacttgctggagaaacggatccagcg
gaagcgtttaaagatcacatcgtacagaaagctaatattgctacgacaagtacaggaaac
gatattgcttcctttagagagatccattccttgtcccccaggggtagatacgatatcaag
ttcttccagacttttattcaccttcacgggaaaacattcgactacaagataccagtttct
acagttatcaggttgttcctccttcctcacaaggatcagagacagatgttcttctgtgtg
aacctggatcctcccatcaaacagggacaaaccaggtattaccttctggtcctctccttc
atgcaggacgaggagactgagttagaactggaaataacagacgaggagctaaaggataag
tatgatggtaaactagagaaggagatgaagggaccaacctttcaattagtttcaaaactc
atgaaggttcttgtcaacaaaaaaatcacagtccctggaagttttgtcggtcatagcgga
accccagccatctcttgctcattcaaggcggcctccggattcgtctatcctctagaacga
gggtttatatttgtgtacaaacctccgatcttcatcaaatacgaggacgtgcagcatgta
aacttcgcaagatccggaggttcgaacagatccttcgatatcgaggttcacactcgagga
gacaccgtctacaccttctccagtatagagaaggaggagtacgggaaggtttatgatttc
ttgaagagtaagaagatcaacgtgaagagtacagggaagatggatgccagtaagattcaa
ctcgatgctgatattgatcataacttagcaaaggtaaaagctgatgctgttagcagtgat
gatagtgcgagtatgtccagcgacgacgaggactttaatcctgatgaacttgaagctaaa
tctgccaaggaggaatatgacagtgatcctagcgatacaggttcggatacaggagatgag
aatttcagtgggagtgaaggagagcaggagaagaagagagctgagaaggcggagaagaaa
ctgaaaaaagcagaaaagaagaaaacttctaaaccaagtggagaaagaacgagtaaaaag
aagaagaagactaagctcccaggacaaccgaagaagcctatgtccgcctactttatgtgg
ttgaatgaggaaggaagagaaaagatcaagacggagaaccccgggatcagtgtgactgag
gttggtaagaagagtggagagatctggagagagatggacggggaagagaagaagatctgg
gagggaaaagctaaggctgcgaaggagaagtatgatgatgagtataaagaatggttggaa
acaggagggtcagaagctattaaacaggcaaagaaggaaggaaaggccgctaaacgtgcg
gctgctagcggcggcactcccaagaaaaaatcctccggctcgactaagagcaaatctgct
ccgagcggcggcactggcggaggtttcaagagcgctgaattcattaaaagcgacggtagc
accgacgacgacgacgaagaaaaggaaaagaagtcgagcgacaagagtgaccaagaaatg
gcaagcgacagcgacaagaacttcaatggttgggtctcaaataatataaatccccgggtt
ccccctgataattcgtttaagatgagtcgtgagggtgcactatggatcggaggagtggaa
gaatacatggacgaagcgttcctaatgaacgcgatgaaacagagcggagaggacaacgtg
atctccgtgaaagtgatgaggaataagaataatggggccgggtatgggttcattaacttt
cctaacgatcaaatggcgttaacggcaatgcatcgcctcaacggtaaaatgattcctaac
tcccgaccgccggcgcggtataaattaaatcatggttcaaaccgaaaccttcctggagaa
aaaaatcactctatttgggttggcgatctctcgacggagatcgacgatcttcttctctac
aagtttttctcagcacgcttccaatctgttgtatccgccaaaattatattagacgagaat
ggaggcagtaaaggattcggttttatccggtttggaaatgaaactgaacagctggcagca
ttaacctctatgcagggaatatctggcctgggagaaaaacctattaaagtttccatcgct
gtacagaaggcgaaggatccctccgcccaaggtatgcagtatccacctagcggtggacag
tacggcggaactcttggtatgggcggagagtatggggctaattacaaccaatataatcac
tactggagcaacatggcggcatggcagcagtatcaaaactactatcagcagtacccagac
cagggagaagtaccggtcaaccctcctcttccttcgggtccgtcccaacctgataaccag
aatcatgttggtgaagatgaacctgtgagtatacttgaaggtcctctagaccaacctgta
gagcacagtgtatctcttgatattcataaactaaatagtgacgctttaaacgtatctatt
gatagagtagtagaagaattgaaggagaatatttacgatcagatcaggaccattcgggac
ccagaaaaggataataatcttgaggagctgaacgtagttgacgagaatctgatcactgtt
tacccgttcgggtgttcaggagataagttcgtggcgaacattgagtttgtaccgactgtt
cagcactgtctctgtatccggactaagcttgaaagaaccctggttcctggaactgtcaaa
ctcgacatatttgttaagtctggaactcacagtacagtagaggatataaacaaacagatt
aacgacaaggaacgtgtatctgctgcacttgaaaaccctaatctacgtgaaactgttgaa
atgaggaagaatagatttcgaaacaaaatggaaaatttccgcttcaatcatcaaagtcct
ccctctatgaccatcagaccccaatctgaagaaacgggttcaagttcggacaatcggcac
acacgggacgacagttcgtccgctttatctagaaaagaggacgaatgggatcctactgaa
gaggacgagttggaggataaggacgagagaagtgagaatgaagaacactattgtgacgag
tattcaacggattatgagaatgatgatattgttcagcaacatgctgcaattcatgctggt
ctagtggatgatgaagatgaagcggaggaggaggaggaagaagaagaagaagacgacgac
gacgaagaagaggaggaggaggatgatgataaacagtgctgggtttgttttgctaatgta
gaagatgatccgacggcaggatgggttcatccttgcaggtgtagcggaactacaaaatgg
gttcatcaagtttgtatccagcggtggatagacgagaagcagaaaggggataatttcgcc
ggtgtgtcctgtccgcagtgcgggaccggatacttgattgggtttcctccctctggcgct
atcatgaaggtgctggacggagctgatcttctggtgggtcgactctgtcctgtagtcgct
ggaggagttatagttggaggtgtttattggtcttgtgtcactttcggggctgttactata
atgcagatagctgggcatgatgaaggttggaacctgatggaaagagctgaccctcttctc
ctgctggtcagcttacctctgatcccggtcggactcgtcctcggcaaaatgattaaatgg
caggatccgattattaaggttttgagattatatttgccaaaagttccgttgacaagttat
ctactccctgccttcgccagtgtccctacacgtgaaggaagtggagccgcagcgtcaata
cctccttccacagatcctgtatccgttacgagaacattctgtggagcacttttctttcca
accattgcaacattcctaggaggaactttatttccggaaactggatccccattaaaacgt
gcagcactcggaggattaacctttgttttaatcaagggaggactcaagatatatcataaa
cagcatctatatatcagacaatgtaaacgaatagttctagactattcctag
DBGET
integrated database retrieval system
