Eurytemora carolleeae: 111713157
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Entry
111713157 CDS
T07296
Name
(RefSeq) ribonuclease 3 isoform X1
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
eaf
Eurytemora carolleeae
Pathway
eaf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111713157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eaf03019
]
111713157
03009 Ribosome biogenesis [BR:
eaf03009
]
111713157
03036 Chromosome and associated proteins [BR:
eaf03036
]
111713157
Enzymes [BR:
eaf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
111713157
Messenger RNA biogenesis [BR:
eaf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
111713157
Ribosome biogenesis [BR:
eaf03009
]
Eukaryotic type
90S particles
RNase
111713157
Prokaryotic type
rRNA processing factors
111713157
Chromosome and associated proteins [BR:
eaf03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
111713157
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
Motif
Other DBs
NCBI-GeneID:
111713157
NCBI-ProteinID:
XP_023343733
LinkDB
All DBs
Position
Unknown
AA seq
2104 aa
AA seq
DB search
MYSQPPPPVSQPPPGMLTNPGALLVRPPSMGTLPAGLSQGSLLCAPPAAVPNMAPLLHLG
PGYSHSIHQAPPPQLQSSGLYTLPHTLVSAPTSLPTYLTGTQSVVSAPTLQFNIPPPSHY
PCVSVPTSFIPGKINWPATYPNQPYQQQFQQVLPPALPGYGYTSQPYTHQEPSIREISQS
RDRSPVRDRSPMRDRSPIRRDEMRREERYRDEKQRWDEEDRYRREESRYRQGPPDKDSVR
SKPGREDRVSTERRSLDRFSRSRETRISLDSRSKEKSRELKRSFEHKKQKEEFERENARL
SRETQRKENIPSSYKKSSKETNDASRTGDRDSRPRTGRTDNSPPEPEKIGKISKRRNRSS
SARSKPILPSKVKIEAEDPVDTNNMTHEEIIAMEKKVWIRSTPADLYYERDRSNPVVMRS
TAKSRAMHQLFEENLLRVGPEARNQFAVREPPKAVGARHCHDSSSDSSDSEDEPDQKFRA
DAMDWMDFRSKDPNRLHPDIWQNMPNEMNDGPACRCPKKARNSGIRHKYWVGETELNPLD
PETNNHNELFHYRVTISPPTNFLINRPTTIYHDEHEFMFEGFSMFTRKRIPNLPVCQIIR
FNIEYSILFFEEKIPENFTIRELELFQKYFFHELLELWDWDTDQRYFFMPRFVRNLSENG
KEVLSMNEVLSYLLNSYTSIANTEDLDFITKLKNEDWQVFADQIKGMLVNCPGMKPSTIR
VDQLDRDHEDKDKPCFPDIVHFGLKPPQLCYAGNPEYQKLYREFVKFRHLLANMPKPTML
DKENLESKEKALQEMRSNVKMKRDTTVVVSSKGFYKTGLMTDIVQHALLLPVLVSHLRFH
FSLDYLETKINYKFNNRFLLQQALTHPSYKENFGTNPDHVRNTLSNCGIRQPEYGDKKVH
VQSARKRGINVLINIMSRFGKKIETESAVKHNERLEFLGDAVVEFITSVHLFYMFPDLEE
GGLATYRSAIVLNQNLSLLALALGLEKYILFSHGSDLCHDSELKHAMANCFEAFMGAVFL
DGGINIADKVFSSAMFSTEPDLFETWTDIPHHPLQTQEPGGDRHWIDTYPNLQKLVQFEN
ETGIEFTHIRLLARAFTDRSIGFNNLTLGSNQRLEFLGDTVLQLVTSEFLYKHFPDHHEG
HLSLLRASLVNNRTQSVVCDDLGMTRYASFHIPKVEFKVKDKADLLEAFVGALYVDKDLY
HCQVFAEVCFFPRLRQFILNQDWNDPKSKLQQCCLTLRTMDGKEPDIPVYKVIECKGPSN
TRVYTVAVYFRGERLAKSTGHSIQMAEMNAAKNALNECSHLFPHLSYQKRILARSFKQQG
FDFVRHNWLQQTNNKREELGMNVKEEKLEESLTFDNQAANQEQGENVVSPKNITGTFKEA
STKRSDDKEKDNGASKNETQAATTRKEEDTAASAKKEKGRVVSPKSKNAQTESVRKEKVR
GEISNRDPGRNDRMGKSDVSLRKEERPRSSVRESERRSKSSRRDELRIPSYRRDEERISS
ELRDERRSTSSRRSERRDSSAGKDQGRSLNGRIDHRRDSNTRKDQSRDLGARKDQVRDSS
ARRYHERDSSARKDHERGSSTRRIHGFDSSSRRDQGVDPSSKRDQDRDPSGNKGQDRDPS
GKRDQDRDPSGKRDQGRDTITRRDSRARKVRDSKVNTDELCRSEDQSSPEKCKRDSRNPF
KERISAKKSEPTKVKDKVRVCERKPESDRSQDKRRTSREGREKNSESEKNLKSESDTLKS
SETFPRKRTEERRKDLDREKAEREELVPKSQTRNDGERTKIPLSRVNQEIQEIENKLAKK
KHREEKKKEISTTVEKSLLTTEEIRETKDINKKQAVNSSKAPIDCSSIPVELISQSPSKE
TILNVISSPKPEKKGSDSEKVIISPKTEVISIAEERTETISIATKPSEICKPSTNEDPSQ
DTSSKPAAAEDSDIEEGECSDDDDDDLEPVKPEEIPIVPEPKPEPIRIEKSRRKSDSKRS
PEKLPKERKPEKTEKEKEREEKKKRWRKESPKRRPSRTSGGEGSRARSPGPYRRSIRRSP
SPRDRDRSKRSRMDYDRYDRYPDYPSRSPNPYWSPDYYDRQPRSPSRDRQKSKYYDPSSK
HYKY
NT seq
6315 nt
NT seq
+upstream
nt +downstream
nt
atgtattctcaacccccaccccccgtatcccaacctcctcctggtatgctcactaaccct
ggggccctgttagtccgccctccctctatgggaacccttcctgcaggattatctcagggt
tcattactctgtgctcctcctgcagctgttccaaatatggcccccctgctccatctagga
cccggatattctcattctatccatcaagcccctccaccccagcttcaaagttcaggatta
tatactcttccccacactcttgtctccgccccgacctctctaccgacttatttgaccgga
acccaatctgttgtgtccgccccaaccctacagtttaatattcctccgccttcacattat
ccttgtgtgtccgtcccaacctcatttatacctggtaaaattaattggcctgcaacatat
cctaatcaaccctaccaacaacaattccaacaagttcttccaccagctctaccaggatac
ggatacacttcccaaccttacactcatcaagaaccatctataagagaaatatctcaatcc
agagatagatctcctgtgagagatagatctcctatgagagatagatctcccatcagaaga
gatgagatgagaagagaggagagatacagggatgagaaacaaagatgggatgaagaggat
cggtatagaagagaagagagtaggtatagacaaggacccccggataaagattcagttcgg
agtaaaccgggaagagaggacagagttagcactgagagaagatctttggacaggttctcc
aggagtcgagaaaccaggatcagtttagattctagatcaaaggagaagagcagagagtta
aaaagatccttcgagcataagaaacagaaagaggagtttgagagagaaaatgctaggttg
agtcgcgaaactcaacggaaagagaatattccttcatcctacaagaagagcagtaaggaa
accaacgatgcttcacgtactggagacagagattctcgacctagaaccggaagaacggat
aactctccgcccgagccggaaaaaataggaaaaatcagcaaaagaaggaatagatctagt
tctgctcgatctaaaccaattcttccgtccaaagttaaaattgaagctgaggacccggtt
gatacaaataatatgacgcatgaggagattatcgcaatggagaaaaaagtttggattcga
tccacacctgcagatctttattatgaaagagatagaagcaaccctgttgtgatgagatca
actgcgaaatctcgagctatgcatcaactctttgaggaaaatcttctccgggtaggaccg
gaagctagaaatcagtttgctgtgcgagaaccacctaaggccgtcggagcacgacattgt
cacgactctagctccgacagctctgatagcgaagatgaaccggatcaaaagtttcgagcc
gacgcgatggactggatggattttcgatccaaggatccaaaccgtcttcatcccgatatc
tggcagaatatgccgaatgagatgaacgacggaccggcttgccgatgtcctaaaaaggcg
cgaaacagtggaatccggcacaaatactgggtcggagaaactgaattgaacccattggat
ccggagactaataatcacaacgaacttttccactacagggttacaatatcaccaccaacc
aacttccttatcaaccgacccaccacgatctatcacgatgaacatgagtttatgttcgaa
gggttctcgatgtttactcgaaaaagaataccgaacctgcctgtttgtcagattattcga
ttcaatatcgagtacagtatactcttctttgaggaaaaaattcctgaaaattttacaatc
agggagttggagctatttcaaaaatatttctttcatgaacttcttgaactctgggactgg
gacacagatcaaaggtacttctttatgccgcgatttgtccggaacctgtctgagaacgga
aaggaggtgttgagcatgaacgaggtgctgagctacctcctcaactcctacacctccata
gccaacacagaggacttagactttatcacaaagttaaagaatgaggactggcaagtgttc
gcagaccagatcaagggaatgctggtcaactgtccgggaatgaaaccctcaacgatcaga
gtcgatcagttggatagggaccatgaagataaagataaaccttgtttcccagatattgtt
cattttggtttaaaaccacctcaactctgttatgcaggaaaccctgaataccagaagttg
tatcgagagtttgttaaattccgtcatctgctcgcaaacatgccgaaaccaacgatgctg
gataaagagaacctagagagcaaggagaaagctctccaggagatgcggtctaacgtgaaa
atgaagcgggacaccaccgtggtcgtctcatccaagggtttctataaaacaggattaatg
acagatattgttcaacatgctcttctccttcctgtcctggtcagccatctccggttccac
ttctccctggactacctggagaccaagatcaactacaagttcaacaacaggtttcttctc
cagcaggcgctcactcatccgtcctacaaagagaactttgggacgaatcctgaccatgtt
cggaacacgttgtcgaactgtgggatccggcagccggagtacggggataaaaaggttcat
gttcagagtgccaggaagagaggaataaacgttctcataaatatcatgtcaagattcgga
aagaagatagagacggagtctgcggtgaagcacaacgagaggttggagtttctgggggac
gcggtggtggagttcattacatccgttcatctcttctatatgttcccggaccttgaggag
ggaggactagccacttacagatctgcaattgttctgaatcagaatttatccttgcttgcc
cttgctcttggcctggagaagtatatcctgttctctcatggatcagatctgtgtcatgac
tcggaactaaaacacgcgatggcaaactgtttcgaggcattcatgggagctgtcttccta
gacggagggatcaatatagcagataaggtgttcagctctgctatgttcagtacggagcct
gatctgtttgaaacctggacggatattcctcatcatcctctccagactcaggagcctggg
ggagacaggcattggattgatacgtatccgaatctgcaaaagctagttcagtttgagaat
gaaactggaattgagtttactcatatcagacttctagccagagcgttcacagaccgttcc
attggattcaacaacctaactctaggttccaaccagaggctggagttcctaggagacacc
gtcctccagctcgtgacctcggagttcctttacaaacatttcccggaccatcatgaggga
catttatccctcctcagggcatcattagttaacaacaggacgcagtccgtcgtctgtgac
gatctcggaatgacgcgctacgcgtcctttcatatcccgaaggttgagtttaaggtgaag
gataaggcggacttactggaggcctttgttggggctctttacgtagacaaggatctttat
cattgtcaggttttcgctgaagtctgtttcttcccaaggcttcgtcagtttatcctgaat
caagattggaacgatcctaaatctaaacttcagcagtgctgcctaaccctcagaaccatg
gacggaaaggaacccgatattcccgtttataaggttattgaatgtaagggtccaagtaat
acaagagtatacaccgttgctgtttacttcagaggggaaagattagctaaatctacagga
cactcaatacaaatggcggagatgaacgcggccaagaatgcactgaatgagtgctctcat
ctcttccctcatctcagctatcagaaaagaattctagcgagatccttcaaacaacaagga
tttgatttcgtcaggcataattggttacagcagactaataataaacgtgaagagctaggt
atgaacgtgaaggaagaaaaattagaagaaagcctgacctttgataatcaagctgctaac
caggagcaaggagaaaatgtggtttcccccaagaacattactggaacgtttaaggaggct
tctactaaaaggagcgatgataaagagaaggataatggtgcttcaaagaatgaaacacag
gctgccactaccagaaaagaggaagatacagctgcatctgcaaagaaggagaaaggacgg
gttgtaagtcctaaatccaagaatgcgcaaactgagagtgtcagaaaagaaaaggtgcga
ggggaaatatcaaacagagatccagggcgtaatgataggatggggaaatctgatgtgtct
ctcagaaaggaagaaagaccacgttcctctgtcagagaatccgaaagacgaagtaaaagt
agcagaagagacgaattgcggattccaagttacagaagagatgaggaacgtatttcaagt
gaattaagagatgagaggcgaagcactagttctagaaggagtgaacgacgagactcaagt
gcaggaaaagatcaggggagaagtttaaatgggagaatagatcatagacgtgattcaaat
actagaaaagatcaaagtcgtgatttaggagctagaaaagatcaagtgcgtgattcaagt
gctagaagatatcatgaacgtgactcaagtgccagaaaagaccatgagcgtggttcaagc
actagaagaatccacggttttgattcaagctctagaagagatcaaggcgttgatccaagt
agtaaaagagaccaagaccgtgatccaagtggtaacaaaggccaagaccgtgatccaagt
ggtaaaagagaccaagaccgtgatccaagtggtaaaagagatcaaggacgtgatacaatt
acgcgaagagattccagggccagaaaagtccgtgattcaaaagttaatacagatgagttg
tgtagatcagaggaccagagcagtcctgaaaagtgtaaacgagactcaagaaacccgttt
aaagaacgtattagtgctaaaaagtctgaacctacgaaggttaaagataaagttagggtt
tgtgagagaaagccggaatctgaccgatctcaagataagagaagaacctcgagagaaggc
cgagagaaaaatagtgaatctgaaaaaaatcttaagtctgaatcagatactttgaaatct
agcgaaacatttcctagaaaacgaacggaagaacgaagaaaggatttagatcgggaaaag
gccgaaagagaagagttagttccaaaatcccagactagaaacgacggagaaagaacaaag
atcccgctatctcgagttaaccaagaaattcaagaaattgaaaacaaacttgcaaagaaa
aaacatagagaggagaaaaagaaagaaatttctaccaccgtagaaaaatctttacttact
actgaagaaatccgtgaaacgaaagatattaacaaaaaacaagctgttaattcatctaaa
gctcctatagattgttcttccatacctgtagaattaatctcccaatctccttccaaagaa
actattctcaatgtgatctcctcaccaaaacctgaaaaaaaaggatctgattctgagaag
gttattatttctccaaaaactgaagtcataagtattgccgaagaacgaactgagactatc
tcaattgctaccaaaccatcagaaatatgtaaaccttcaactaatgaagacccttcacaa
gatacctcttcaaaaccagcagcagctgaggattcagatatcgaggaaggagagtgctct
gacgatgatgatgatgatcttgaacctgtaaaacctgaagagattcctatagttcctgaa
ccaaaaccggagccaattagaatagagaaatcaagaagaaaatcagactcaaaacgttct
ccggagaaactaccaaaggagaggaaaccggagaagacggaaaaggagaaagaaagagaa
gagaagaagaaaagatggagaaaagaatctcctaagaggagaccaagcagaacttctggc
ggggaaggatccagagcccgttctccaggtccatacagacgtagcataagaagatcacct
tcccctagagacagggatcgtagcaaacgatcccggatggattacgatcgctacgatcga
tatcctgattatccctcccgaagtccaaacccctactggtctccggattactatgatcgg
cagccaagatctcctagtcgtgatcgtcagaaatccaaatattacgatccttcttccaaa
cattataaatactga
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integrated database retrieval system
