Eurytemora affinis: 111713229
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Entry
111713229 CDS
T07296
Name
(RefSeq) SWI/SNF complex subunit SMARCC1-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
eaf
Eurytemora affinis
Pathway
eaf03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111713229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eaf03021
]
111713229
03036 Chromosome and associated proteins [BR:
eaf03036
]
111713229
Transcription machinery [BR:
eaf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111713229
Chromosome and associated proteins [BR:
eaf03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
111713229
PBAF complex
111713229
GBAF(ncBAF) complex
111713229
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
BRCT_2
BRCT
Motif
Other DBs
NCBI-GeneID:
111713229
NCBI-ProteinID:
XP_023343822
LinkDB
All DBs
Position
Unknown
AA seq
703 aa
AA seq
DB search
MAATLEPRERGGPIQKYWEEASTISQLESVKAWLLKNAKKHVASDPPTAKSLSQLVQQFI
QLQEDNLGKGAKNPAFTRLPMFLFYDLAPGGSLCHILSAMYKFKTEQGWRRFDLQSSSRK
DANIQMCQRVEESLNQQKLYISPIVFIKDNVKAADREKAKDIVKKKGGTITEDEDEATHI
LFPKVELNNELYARPVFRRGDKCLIHFIMMPDSHDNWGVCYPDSDTPEAPEERAEVYLVS
VDWVLDSQQYNEWLNEEDYELDEHGKVKPSETAMTYDEFQTSEEKPEKKKKTTKRKRSPS
PAPKSRKSKGGAKSKKSKNDEEDEEDLTADMEDPVPENSISEVKTESQPAKGIFPVPSYS
AWFDYNSLHAVEKRNLPEFFNGKNMSKTPEIYLSYRNFMIDTYRLNPTEYLTSTACRRNL
AGDVCAIMRVHAFLEQWGLINYQVDIDARPTAMGPPPTSHFHILADTPAGLAPVNPPRTP
QPSAARTMLDLDGRRVDKPDTDRKSEIGGDFGLKTDIYDKRNAALKRASAATASRDWTQQ
ETLLLLEALEMFKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDPESGGGALGPLAY
QPIPFSAAVYTLQAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREA
LEYQRQQLIQERQQFHLEQLRAAEFRARTTAQTQLNKEQPISS
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaactctggaaccccgtgaacggggaggacccatacaaaaatattgggaagaa
gcgtcaacaatttctcaattagaaagtgttaaagcatggctccttaaaaatgccaaaaag
catgttgcgagtgacccacctactgcgaagtccttatctcagcttgttcagcagtttatt
caactccaagaggataatctcggaaaaggagcaaaaaatccggcattcaccagacttccg
atgttcctgttctacgatcttgctcctgggggctccctctgccatatcctcagcgctatg
tacaagtttaagaccgagcagggttggagaaggttcgatctccaatcctcaagcaggaag
gatgccaacatacaaatgtgtcaaagggttgaggagtcgttgaaccagcagaagctgtac
atcagtcctattgtcttcatcaaggacaacgtcaaggctgctgacagggagaaggctaag
gatatagtgaagaagaaaggtggaactattacagaagatgaagatgaagctacccatatc
ctttttcccaaagtagaactaaacaacgaactatacgcaagacccgtgtttcgtcgaggt
gataaatgcctgattcattttatcatgatgccggacagtcacgacaactggggagtttgt
tatcctgacagtgatacaccagaggctcctgaggagagagctgaagtgtacctggtatct
gtggactgggtcctggactcccagcagtacaacgagtggttgaacgaggaggattatgaa
ctagatgagcacgggaaagtaaagccctcagagacagctatgacctatgacgagttccaa
acaagcgaagagaaaccagaaaagaagaaaaagaccactaagaggaaacgaagccccagc
ccagcccctaaaagccggaagtctaagggcggagctaaatctaagaagagtaaaaatgat
gaagaggatgaagaggatcttaccgctgacatggaggacccggttcctgaaaattctatt
tctgaagttaaaactgaatctcaaccagccaaaggtatttttccagttccaagctacagt
gcctggtttgactacaacagcttgcatgccgtagagaaacggaatcttccggaattcttc
aacggaaagaatatgtccaagacacctgaaatatatttatcgtacaggaacttcatgatc
gatacatacaggctaaacccaacagagtacctgacctctacagcatgcagacgtaaccta
gctggagatgtgtgcgcgataatgcgcgtgcacgctttcctagagcaatgggggctcatc
aactaccaggttgacattgatgcccgccctacagcaatgggtcctcctcccacctcccac
ttccatatactcgccgatacacccgccggtctggctccggtcaacccaccacgcacgcca
caaccatcggcggccagaactatgctagatttggacggccggagagtagacaagccggac
actgaccggaagtctgaaatcggcggtgattttggtctaaaaactgatatctatgataaa
agaaacgctgctttgaaacgtgcttctgctgcgacagcgagtagggattggacccagcag
gaaaccctcctactcctggaggccctagagatgttcaaggatgattggaataaggtttgt
gaacatgttggcagtcgaacccaggacgaatgtattctacatttcctccgtctacctata
gaagatccctacctcgaggatccagagagtggaggtggagcccttggtcccctggcatac
caacctatcccatttagtgctgcagtatatactctccaggctaagcacctggctgcagta
gaagagcgtaagatcaaatctcttgtcgctcttcttgtcgagacacagatgaagaaactt
gagatcaagctccgacacttcgaggagttagagaccatcatggacagggagagggaggcc
ttagagtaccagagacagcagctcattcaggagcgtcagcaatttcatttggagcaattg
cgcgcagctgaatttcgagcacgaaccactgcacaaacacagctgaataaagagcagcca
atcagctcgtag
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integrated database retrieval system
