Eurytemora carolleeae: 111713880
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Entry
111713880 CDS
T07296
Name
(RefSeq) protein patched homolog 1 isoform X1
KO
K06225
patched 1
Organism
eaf
Eurytemora carolleeae
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sterol-sensing
Patched
NPC1_MLD
MMPL
Motif
Other DBs
NCBI-GeneID:
111713880
NCBI-ProteinID:
XP_023344627
LinkDB
All DBs
Position
Unknown
AA seq
1296 aa
AA seq
DB search
MAKSSSFQKTHSTRLSDQSAVCGKTPELRSTSVSDPGLLDRTSYTNASVALKHMEKGRAS
GNHAGLWVRSKIQEEMFQLGNIIQVHAGKVLFTGLLLLSSLTIGLKSVKVEDRIDRLWVV
EGGRVAREMEYMDSTLGEGAGGVNQMLIQTGKGSNLLSADSLLHHLKILKRASRVTVQKD
DITWQLADLCYKPSIPQTELQFVEQILDKLFPCAIITPLDCFWEGSKLLGPDSPVYVPLG
GDEGSMGVSWPTLNPTQLFNKMADIFPTFRLNQFQRFMKDAGINSGYQEKPCLNPLDPGC
PLSAPNKNKTSAPDIGAELTGGCSSFATRYMRWPEELVVGGAQKNKSGYIREIGALQSVV
QLMGPRDMLDYWSNTYKVHTLRWNLETAQEILQEFQERFQEEVEKEFEKEKYEFNSYSSL
ALKNLMNKFSTGSITNMVAGYTIMVVYAGVTLYRWGEKVRSHAGLGVCGVLLVSVTVAAG
MGLAGLTGLVFNASSTQIVPFLALGLGVDSLFLLIHTFSSQTAINIPCKDQVGEVLRKSG
VSVLATTFCNVAAFLAATIIPIPAMRSFCFQAATLISLNLFSVIILLPAMIALDVRRVFA
NKYDILCCVGVAEEEENNKKNESKCRKGEVFTSWSGDSPGEKSSSIDLMECKEAKTGSKS
CSKNLTLARFARDYYGKLIIQTPIKIIIIIIALALLSASAWGINKLEDGLNLTDVVPKNT
PVWKFLEAEDKYFGFYNMYAITEGNFEYPENQQMIYDFHNSFVRVQNIIKDDNGGLPEFW
LSLFRSWLIRLQEAYDKDAAVGLIDEEGWKKNASDDGILAYKLLVQTGHVDFPVDKSLLR
TERLVINGMINPSGFYNYLSAWYSNDAMAYSFSQGSIVPTPKSWFSDRTDYNLKIPKSKP
IRYAQIPFLLKNLGTTDTVVETILQVREICDKFEENGLPNFPNGIPFTFWEQYIGLRSYI
LIALGASLLAVFLVVSLVLMSPWAAALMTFVIGCIVGELFGALGILGIKLSAVPAIIIIL
SVGLGVEFTIHFLVAFVGSVGNRERRTLIALEQMFAPVIHGAVSTLLGVLMLAFSQFDFI
VRYFFLVLLALVILGLFNGLAFFPVLLVILGPPAQIIPTSGDGSSLPPLTPPTPPARFKA
KPVKPTKFGQRSQKVPRRHNSDLSLSTIAEESHSQHSTNSCSSNSSGGCGDPGSVQSSLN
GTSVFLEPHITVETSTLPQSSTNSSGSGGQVTKVTATAKFKLELHTPAAESSSRSNSRSR
SRRNSSSSSTPAESLRASGDTSTASSLSSDGGFSER
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatctagtagttttcaaaaaacgcattcgacacgcctttctgatcagtcggca
gtttgcgggaaaacgcctgagctacggagtacatcagtttcagatccaggccttttagat
cgaacaagttatactaatgccagtgttgcgctgaaacatatggaaaagggacgtgctagc
ggtaaccatgctggcctatgggttcgaagcaaaattcaggaagaaatgtttcaactagga
aacattatacaggtgcatgctggtaaggttctatttaccggcctcctccttctgtcctct
ttgacaatcggcctcaaatctgtaaaggtggaggaccggatagaccgactgtgggtggtt
gagggtggtcgggtggcgagggaaatggaatatatggactcgaccctgggtgagggtgct
ggaggggtgaatcagatgttgatacagacaggcaagggaagtaatctattgagtgctgat
tccttacttcatcatctcaagattcttaaacgtgcatcaagagttacagtacagaaggat
gacattacctggcaactagctgatctgtgctacaaaccgtccatcccacagaccgaatta
caatttgtagaacagatcctagacaaacttttcccttgcgccattattacaccactggac
tgcttctgggaaggaagtaaactgctaggacctgattctccagtctatgtaccgctggga
ggagacgagggtagtatgggagtatcatggccaacactaaacccgactcaactttttaac
aaaatggcggatattttcccaaccttccgcctaaaccagtttcagaggttcatgaaggat
gctgggatcaattcaggataccaggaaaagccttgcttgaatcccttggaccctggttgt
ccattgagtgctcctaacaagaacaaaacatccgctccagatataggagcagaacttact
ggaggttgttctagctttgctacaagatacatgaggtggccggaggagctagtggtcgga
ggtgctcaaaagaacaagagcgggtatatccgagagatcggtgctttacagtctgttgtc
cagcttatgggaccaagggatatgctggactactggtccaacacatataaggtccataca
cttcgttggaatctggagacagctcaggagatcctacaggagttccaggagaggttccag
gaggaggtggagaaagaattcgagaaggagaagtatgagttcaattcctactcctctcta
gctctgaagaatcttatgaataagttctcaactggttctatcactaacatggtcgctggt
tatactattatggttgtttatgctggagtcaccctgtatagatggggtgagaaggttcgt
tcccatgcaggtctaggtgtatgtggtgttctcttggtttcagttacagtagcggctggt
atgggtctagcgggcctaacaggactagtgtttaatgctagcagtactcagatagttcca
ttcctggctctagggcttggagtagattcacttttccttctcatacacacattctcttct
caaacagctattaacataccctgcaaggaccaagttggcgaagtgttaagaaaaagtgga
gtgtctgtgttagcgacaacgttttgcaatgtggcagcatttctcgccgctactatcatt
ccaataccagccatgcgctctttttgcttccaggcagccaccttgatatctttgaatcta
ttttctgttatcattcttcttcctgccatgatagctctagatgtccgacgagtgttcgca
aacaagtacgacattctttgctgtgtgggtgtagctgaagaggaggaaaataataaaaag
aatgaatctaaatgccggaagggtgaggtttttacatcttggtcgggagatagtcctgga
gaaaaaagctcttctatagatctgatggagtgtaaagaagcaaagactggaagtaaatct
tgttccaaaaatctcacattggcaaggtttgcccgagattactatggtaaactgattatc
caaactcccatcaaaatcattatcattatcattgcacttgcactattaagtgccagtgct
tggggtattaacaaattagaagatggtctcaaccttactgacgtggttcctaaaaatact
cctgtttggaagtttttggaggctgaggacaaatattttgggttctacaacatgtatgcc
atcacagaaggaaactttgaataccctgagaaccagcaaatgatctacgatttccacaat
tcatttgtcagagttcagaacattatcaaggatgataatggaggtttgccagagttctgg
ctttctttgttcagaagctggcttatcagacttcaagaagcttatgacaaggatgcagct
gtaggtttaatcgacgaggagggttggaagaagaatgcatccgatgacggaattctagca
tataaactcctggttcagaccggacatgttgatttcccagtggataagtcacttctccgg
acggagcgactagtaattaacggaatgataaacccctcagggttttataattacctttct
gcttggtattccaacgatgcaatggcttacagttttagccagggaagtatagttccgact
cctaaatcttggttttcagatagaaccgattacaatcttaaaataccaaaatcaaaaccc
attcgttacgcgcagattccatttctcttgaagaatttagggactacagacactgttgtc
gaaaccatccttcaagtaagggaaatttgtgacaaatttgaagagaacggactcccaaac
tttccaaatgggataccattcactttttgggaacaatatatcggattacggagttatatt
cttattgcgctcggagcatctcttctagcagtattcctagtagtttccctggtactcatg
tcaccttgggcagccgctttgatgacctttgtgatcggttgtatagttggggagctgttt
ggagcactgggcatacttggaattaaactgagcgcggtacctgccatcattatcatcctc
tcggttggtctcggtgtagagtttacaattcattttctagtggcttttgtgggaagcgtt
ggaaatagagaacggagaacattgattgctcttgaacaaatgtttgctccagttatacac
ggagcagtctcaaccctactcggagttctcatgttggcgttctcacaatttgattttatt
gtcagatacttttttcttgttttgttggcccttgttattcttggactgttcaatggcctc
gcattcttccctgttctccttgtgatcctcggacctccagctcagattattccgacctct
ggtgatggtagcagcctccctcctcttacacctccgacacccccagcacggtttaaggca
aaacctgtcaaacctacaaagtttggacaaagatctcaaaaagttccaagacgtcacaac
tctgatcttagtctgagtacaatagcagaggagagccatagccagcacagcactaacagc
tgtagcagcaacagcagtggaggttgtggtgatccaggatctgttcaatcttcattaaat
ggaaccagtgtgttccttgaacctcatatcactgtagagacttccactttacctcaatct
agtacaaatagctcgggttccggtggacaggtgactaaagtgacagctacagctaagttc
aagctcgagcttcacactccagctgctgagtcgagcagtcggtcaaattcacgttctcgc
agccgacgaaacagctccagcagtagcactccagctgaatcacttcgagctagtggtgac
actagtacagcatcaagcctgtcaagtgatggtggattctcagaaagatag
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integrated database retrieval system
