Eurytemora affinis: 111714196
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Entry
111714196 CDS
T07296
Name
(RefSeq) vacuolar protein sorting-associated protein 13-like
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
eaf
Eurytemora affinis
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
eaf04131
]
111714196
Membrane trafficking [BR:
eaf04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
111714196
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
Motif
Other DBs
NCBI-GeneID:
111714196
NCBI-ProteinID:
XP_023345017
LinkDB
All DBs
Position
Unknown
AA seq
2943 aa
AA seq
DB search
MQHTANCREYRELYKDKLLGSKSVEFNKRLEELEIILDVFNINLNRELAETAASARRKEE
AKQGYFNWFWGKKENKEDAGELEKALTPDERAKLYDAIGYQEDAEEGTLEYPRRFVRARL
GFLLAGFRIELLDEDLRDNSVLTLHLDTVSMEITQRPAAGNMLVSLAMQSLTVTGIDIDK
SAPKVITTVSTLQNCNLLSVEYEINPPADPGGNLDEDKGSVYDRRLFISSSPLEIIYDMK
TVNHVMEIFKPPEELQISYLQETAMETMKEYKEVRMSKLGWEYVIQNHKFMDVNIQLESS
YIVIPYRGVYTEGCPALIANLGSISIKSGQVTQNMKNSKKQGGLEALKSGLDPLKMFEAK
LKENLLEQAYDKFTIKLENMELMLALRDENWRLEICNKNSKLHLLKPINVDFSFKYCLIQ
NDPDFPITKLHGGLPVLGLCIEEQRLLMLAELMEKILDPDDEDKFVSKQTLKRTDSDASF
SSAVSSLGASANSFFIGRKKNVVVPVNVPELKRESKTSIASNVVQLDMSFNIEKLKLDIE
KNEIPLFKFEINGMGSTILVKKHCLVGKFEINSCVCEHVKFKMPDGSAVKLLNTDSTLYK
DQKLLSIKYTKLNPNSPDWAGVQQSIDAILTSVHFCVHQDAILDLAKESALWMTNIQSRA
SKLMVAAEAPKTPVTTPNRDSPLGLKRQGARRLSRQNSGGNDASGGLMKSIYKPKGRVAS
RSKSQIVEEPVQFRFFAQLKEVGFSLMTSYADFSSMRAENLVADLRISRSQTTINAKLME
FQVFDSCERTQYKMIAKSTDAEVFNVNITLNDNVDELDKEKGMPDVLVKANMSQLRVVFL
MKYVKDLLLFIDPFTNMKEYVMELSAEASERTVNLAKEIYSSATRVKLDISIKAPVIIIP
IHSESKTTFEANLGRLLLCNRHRVTPEKFLMDELSLEFSNITLCRSETGSHNKFTIIEPI
SFEMELARNMNGAVNESDPPDIKVTGVLEQVKINLLKEDYDNIISLLSKNFGEKGVIKAV
PMSIKTNSKLNLPIKPNYQRGSRASLLSQEVLADKEKKEVSPKAKTTDFKFTFKKFSLQI
LNNSYCNDQHDSLGEISIDQLNVYGAMTADEELYVVATLKNVILEDTRHSLDSAQGRIVR
LLESKMVDNSTMVDVTYQRFSNAEELLNCKISSFTVVASVSYLLKISEFFIPNEVVDYDE
FFAATGLGEGGYYKSESEAKPVSVTRRISFRMDEPDIILVNDIEDKTTDAILFNAQLNMN
IVQQQEKLTFNMTLDDLRGHTCKFDPKDREQTLAQILKPTNMAMHFSQDTESRRTRIDMN
FSSLVLNVSPASIMILLQSYNTFMLNFQALPEDLEEEVKVEKSDENLWKTADIVDDEMWY
LKPDEALDLMQHADTMSLASTVSNLGDEHLMFKVKQLIITMESGRGNNTVPLVLLESKVE
GEVRNWSWRLWVGANLELEAAYYNSKVALWEPIIEPIQVINQPGPSYNYRWSLDFSYQSN
SVNELGSALLSPNFNVDEPDTFVCPENLPPLTELKLSSSHALQLTITRTFLSVLNNMIES
FSLTGMERTSSKVIHEDPLILRNQMGREITISLADNKQLVLLDHSQEMDVVSLPSGSEKA
FGLRMSRSSLDCKTRSYTSPLQQQTEESSSAIRLKIVGEITPLSLPISKTDMRFFPFQFR
GCEFGYEKGFVSKVEVENCSKIITLQSIVIFKNYYPIPVKVWTENNGKFRVISRLEKGEE
WNAPISDIYTQLGRFYFSLDGQGQNIGLEFLTWKEIELSRSVRRVIECSNSHGNPSVFFN
VEGLATDIFRETSRDRGSSIYTISIRPVVVLKNCLPIPLYYSSGKTEEFKTLTEGEIGCL
EDVRHGHSMIRLKLYGWRYTDLACDKVFEDNMRELDFWRFESTEPESSNIRLDLGVQKEY
SKGTIVLSVFAPFWLVNKTKRTLYYKGHDSGSEVAHYPDDEKLPLMFSYITKSLFGKKKI
SLKMDSSQWSDPFTIDTIGDTGKITCKLDTRRGSLKRNFIGLDKTKEDAYSIGIQISQSS
TSLTKIITFTPYFMVYNSADFNILMKEVEDELGWTTIPAKECVPIWPIYGGKSYICKAEN
YPETTVPFSILDINTSLLMLSNKYGGIDVRVKTDNSQVLVTLARYKTGYAPALLVNNTPS
WFIEFGELGSSNRKFLAPGKKCLYTWEKPSGGRTLVWSVQGLNTPPLENSLKSDAYDSFK
IGNGYLSWVSFLDGMQRVLLFTNNGHLAERLAKTTGEMERIEQEIEVSISAIGVSLVNNS
ESVRKELAYLSVTCSDTVWEVRKEGKQRYRPLTVHQSSLIENDFKLFNRLLGVNKNPNPR
REIEDGSIILDYREERMEKPHRGRVRRQFQKGLWLQVRTSPHQRQIHMKVNHIQLDNQLL
ECLYPVIAAPVPPPKSVMADSVPKPFIELSILEYTSPAHVDMKQYKYIHALIQEMQLKIE
LGFVNAISELFEDEEILEENTKEKLELDLEMARKPLQEHAILTVSQGQKDFYDYLHMSPL
KIHVSFSLTSHNARRDGTSHRGSNFIGLLLQSFGVTITDSNDIIFRLAYFERKHQFYGFN
DLTTEISRHYTSQAVKQMYVVLLGLDVIGNPFGLAVGVARSVEDLFYEPFQGAVEGPGEF
AEGLAIGVRSVFSGVVGGAAGTVSKITGALGKGLASLTFDEKFQNKRRETIKRRENQTLM
DGMAVNVRDLSMGFVGGVTGVFTKPYEGASKEGVSGFFKGVGKGVAGLVTRPTGGIVDFA
SGTFDTVKRATEVGDEFKRVRPARYIHPDGVVRYYDRKEAEGQRILSQVEKGRYAAEDTY
MLHEYTIPDKEVFLVTNKRLLYLHTVLGSWSMDWEFEFSRIQGPPSVLQEGGRWYIIIQP
LEEKKNILGGLFTKNSGMKVFLPEGSNKGSAQLLARVIEDLRTSKNNFETIFIEMIQRKA
KLN
NT seq
8832 nt
NT seq
+upstream
nt +downstream
nt
atgcagcatacagctaactgcagggaatacagagaactctataaggataagttgctggga
agcaagagtgttgagtttaacaagagattagaagaacttgagattattctagatgttttt
aacatcaatttaaacagagagttagctgagactgcagctagtgctcggcgtaaagaggaa
gctaaacaaggatattttaactggttctgggggaagaaggagaacaaggaagatgctgga
gaacttgagaaagctttaaccccagatgaacgtgctaaactctatgatgctattggatat
caggaggatgcagaggaggggacactagagtatcctcgaaggtttgtgagagctaggctt
ggtttcctcttggcgggtttcagaatagaacttcttgatgaagatcttagggataatagt
gttctcaccctacaccttgatactgtcagtatggaaataacccaacggcctgcagctggt
aatatgctggtcagtttagctatgcagagtttaacagttacaggaatagatatagataag
agtgctcctaaagtgataacaactgtatctactctacagaactgtaatctactctcagta
gaatatgagattaatccgccagcggatccaggaggtaatctagacgaagacaagggatca
gtatacgatcgtagattgttcatcagttcctcccccctagagatcatctacgatatgaag
acagtgaaccatgtgatggaaatatttaaacccccagaggaacttcagatctcgtatcta
caggagacagctatggaaactatgaaggagtacaaagaggttcgaatgagtaaactggga
tgggagtatgtcatccagaaccacaagttcatggatgtaaatattcaattagagagttca
tatattgtgatcccgtaccgtggtgtatataccgagggatgtcctgctttaatagctaac
cttggtagcattagtatcaagagcggtcaggtcactcagaatatgaagaacagcaagaag
cagggtggactagaagccctcaagagtggtcttgatcctttgaagatgtttgaggcgaag
ttaaaggagaaccttctggagcaggcatacgacaagtttaccatcaagctggaaaatatg
gagcttatgctggctctcagagatgaaaactggagacttgaaatttgcaacaagaattca
aaactgcatctcttgaaaccgataaatgtagacttcagctttaagtactgtctgattcaa
aatgatccagattttccaataacgaagttgcacggaggtcttccagtccttggtctttgt
attgaggagcagaggcttctcatgctagcagagctgatggagaagatccttgatcctgat
gatgaggataagtttgtaagtaaacaaaccttaaagagaactgactcagatgcatccttc
agtagtgctgtctccagtcttggtgcctctgcaaactcattttttattgggaggaaaaag
aatgttgttgttccagtgaatgtcccagagttaaaaagagagtccaaaacctcaattgcc
tcaaatgttgttcagctagacatgtcatttaacattgaaaagttgaaactggatattgag
aaaaatgagattcctttgtttaagtttgagattaatggaatgggctcaacgatccttgtt
aagaagcattgtcttgttggaaagtttgaaatcaactcttgtgtctgtgaacatgtcaag
tttaaaatgccagatggttcagctgttaaactgcttaacacagacagtacattatacaaa
gaccagaagctattgtcaatcaagtataccaagcttaaccccaattctccagactgggcc
ggagttcagcagtcaatagatgcaatcttaacctctgtacacttctgtgtccatcaggac
gccatcttagatttggcaaaagagtcagctctttggatgacaaacattcagtctagagca
tctaaactaatggtagcagctgaagcccctaagactcctgtaactaccccaaatagggac
tctcctttgggactgaagagacaaggcgcaagaagactttcgagacagaattcaggtggg
aatgatgcatctggaggtcttatgaaaagcatttataaacctaaaggtcgtgttgcatct
agaagtaaatcacagatagttgaagagccagtgcagtttaggttctttgctcagctaaag
gaggttggtttctctttgatgacaagctatgcagatttctcaagcatgcgtgcagaaaat
ttagttgctgatcttcgtatttcccgctcccaaaccaccatcaatgccaagttgatggaa
ttccaagtttttgattcttgtgaaagaactcaatacaagatgattgctaaaagtactgat
gctgaggttttcaatgtcaacattactctaaatgataatgtagatgagctagataaggag
aaaggaatgcctgatgtcttagtgaaggcaaatatgtctcaacttcgtgttgtcttcctc
atgaaatatgttaaggacttgcttctctttattgacccgtttactaacatgaaagagtat
gtgatggagctttcagctgaggcaagtgagagaacagtgaatcttgccaaagagatatac
agctctgctacaagagttaagcttgacatctctatcaaagctccagttatcattataccc
atacattcagaaagcaagaccacctttgaagctaatcttggtagacttttgctctgtaac
agacacagagtaacaccagagaagttcctaatggatgagctgagccttgaattctcaaac
ataacactgtgtaggtcagagacaggcagtcacaataagtttactatcattgagccaatt
tcattcgagatggagttggctaggaacatgaatggagcagttaacgagtctgatcctcca
gatatcaaggttactggtgtactggaacaggtaaagattaatttactcaaagaagattac
gacaatattatatcattgttgtcaaagaactttggagaaaaaggtgtcattaaagctgta
cccatgtctataaaaaccaattcaaaactaaatcttcccataaaacctaattaccaaaga
ggcagcagagcaagtcttttatctcaagaagtcttggcagataaggaaaagaaagaagta
tcaccaaaagctaaaaccactgactttaagtttacttttaaaaagttctcgctacagatt
ctcaacaacagctactgcaatgaccagcatgactctttaggagaaattagtatcgatcag
cttaatgtttatggagccatgactgctgatgaagaactttatgttgttgctacccttaag
aatgttattttagaagacactagacatagtttggattcagctcaaggcagaatagttcgc
cttcttgagtctaagatggttgacaacagtaccatggtagatgtgacctatcaaaggttt
tccaatgctgaggaattactgaattgcaagatttcaagcttcactgttgttgcatccgtt
tcatatctgctgaaaattagcgagttctttattcccaatgaggtggttgattatgatgaa
ttctttgctgccacagggctaggtgagggtggatactacaagtctgaatctgaagcaaaa
cctgtttcagtgacaaggagaatatcctttaggatggatgaacctgatattatccttgtc
aatgatattgaggataaaaccactgatgccattcttttcaatgcacagctcaatatgaac
attgttcagcagcaggaaaaattgacatttaacatgacgttggatgatttaagagggcac
acctgtaagtttgatcctaaggaccgagaacaaacactggctcagatattgaagcccact
aacatggcaatgcacttcagccaggacactgagagtcgaagaaccaggattgatatgaac
ttctctagtcttgtgctcaatgtatcccctgcctctatcatgatccttcttcagagctac
aataccttcatgctaaacttccaggctttaccggaggatcttgaagaggaggtaaaggtt
gagaagagcgatgaaaatctctggaaaacagctgatatagtcgatgatgagatgtggtat
ctgaaaccagatgaggcactagatttaatgcagcatgcagacaccatgtctcttgcaagt
actgttagcaacctgggggatgaacatcttatgttcaaggtgaaacaactgataattaca
atggaatctggacgagggaataataccgttcctttagttcttcttgaatccaaggttgag
ggggaggtgaggaattggagttggagactatgggttggagctaatctagagttagaagca
gcttactacaatagcaaggttgcattatgggaacctattatcgaacccattcaagtaatt
aaccaacctgggccatcctataattacagatggagcctggatttcagttatcagagtaac
tctgtcaatgaacttggttctgctctgctctccccaaacttcaacgttgacgaacccgat
acattcgtctgcccggagaatcttcctccgcttacagaactcaagctatcctcttctcat
gcattacagctaacaattacaagaacctttctgtctgttctgaacaatatgattgaatcc
ttcagtctgacagggatggagaggacatcctcgaaggttatccatgaggatcctctgatt
ctcagaaaccagatgggtcgggagataacgatatctctagccgataacaagcagcttgtt
cttctagatcattctcaagaaatggatgttgtgagtttaccgtcagggtcggagaaagct
tttggtttacgaatgagtagaagtagtctcgactgtaaaaccagatcctatactagtcct
ttacagcagcaaacagaagaatcatcatcagctatcagattgaagattgttggagaaatt
acaccactgtcattacccatcagtaaaactgatatgagattcttccctttccagttccgg
ggatgcgagtttggttacgagaaaggatttgtatccaaggtggaggtggagaactgctcc
aagattatcactctgcagtccatagtcatctttaagaactactatcccatccccgtcaag
gtttggacagagaataatggaaaatttcgagtaatctctagactagagaagggagaagaa
tggaatgcccccatctccgatatctacactcaacttggacggttctacttctctcttgat
ggtcagggacagaacattggattggagtttctaacctggaaagaaattgagctctcaaga
agtgtgagacgtgtaattgaatgctccaactctcatggaaatccatctgtcttcttcaac
gttgaaggtttggctacggatatttttagagaaacatccagggatcggggtagtagcatc
tacacaatatctattcgtcctgttgttgttctgaagaactgtcttcctatccccctctac
tactcctcaggaaagacagaggagttcaaaacactaactgaaggggagattggatgtctg
gaggatgtgcgacatggacactcaatgatccgcctcaaactgtacggatggagatacaca
gatctagcatgtgacaaggtttttgaggataacatgagggaattagatttctggaggttt
gagagcactgaaccagagtcaagtaacatcaggctagatctgggggtgcagaaggagtat
agtaaaggtaccattgttctatcagtgtttgctcccttctggttagtcaataagacaaag
cgtactctgtactacaagggccatgattcaggtagtgaggtagctcactaccctgacgat
gagaagcttccacttatgttttcttatattactaaatcactgtttggaaagaaaaagatt
agtttgaagatggattcatctcagtggtctgatcccttcaccattgatacaataggagac
actggtaagatcacatgcaagctggacacaagaagaggatcattaaagagaaattttatt
ggtcttgataaaactaaagaagatgcgtacagtatcggaatccagattagtcagagtagc
actagtcttaccaagataatcaccttcactccgtatttcatggtgtacaactccgcagac
ttcaacatcctgatgaaggaggttgaggatgaactaggttggacaactatacctgcaaaa
gagtgtgttccaatctggccaatctatggtgggaaatcctatatatgcaaggctgaaaat
taccctgaaacaactgtacctttttctattctagacataaacacatcccttctcatgctc
tcaaacaagtatggaggtattgatgtaagagtgaagacggataattcccaggtcctagtt
accctagcaaggtataaaacaggatatgcaccagctcttcttgtgaataatacaccctcc
tggtttattgagtttggagagctgggttccagtaacagaaagtttcttgctcctggtaag
aaatgtttgtacacatgggagaaaccatcaggaggacgaaccttagtctggtcagttcag
ggtcttaacacaccaccgctagagaacagtctgaagagcgatgcctatgattcatttaag
ataggaaatggatatttatcctgggtatcttttctagatggaatgcaacgtgtcctcttg
ttcaccaataatggtcacttggccgagagattagctaagacaactggtgaaatggaaagg
attgagcaggaaattgaagtatcaatctctgcaattggagtttccctggtcaataactct
gagagtgtaagaaaggaattggcatacctctctgtcacttgcagtgacacagtttgggag
gttaggaaggaagggaagcaaagatatagacctttaactgttcatcaatccagccttata
gaaaacgatttcaagttgtttaaccgtctgctaggggtgaacaagaacccaaacccaaga
agggaaatagaagatggttcaattatacttgattatagggaggaaaggatggaaaagccc
caccgaggacgggtccgaagacagtttcagaaaggtttatggctccaggtccgcacatca
ccacatcaaagacaaattcacatgaaagtcaaccatattcagcttgacaatcaactgctg
gaatgtctgtatccagtaattgctgctccagttcccccgcctaagtctgtaatggcagac
agtgttcccaaaccctttatagagctctctattctagagtatactagtccagcacatgta
gatatgaagcagtataaatacattcatgctctcatacaggagatgcagctaaagattgaa
cttgggtttgtgaacgctatctctgaattgtttgaagatgaagagatccttgaggagaat
actaaggagaagcttgagcttgacctggagatggcgaggaaacctcttcaggagcacgca
atcctaactgtatctcagggacaaaaggatttctatgattacctccacatgtctccactc
aagattcatgttagcttctctctgacatcccacaacgcccgacgggacggaacatctcat
cgaggatcaaacttcatcggtcttcttctccagagcttcggggtcaccatcacagacagc
aatgatatcatctttagactggcgtacttcgaacgtaaacatcagttctatgggttcaat
gatctgacaacagagatatccagacactatactagtcaggcagttaagcagatgtatgtg
gttctactcggccttgatgtcataggtaatccattcgggttggcggttggtgttgcacgc
agtgtggaagatctcttctatgaacccttccagggggctgtagagggacctggggagttt
gctgaaggtttggctataggagtccgtagtgtgtttagtggtgtagttggaggagcagct
ggaacggtttctaagataaccggagctcttggcaaaggtttggcatctctcacctttgat
gaaaagtttcagaataaacggcgggagacgattaaacggcgggaaaatcaaactctaatg
gacgggatggcggtgaatgttcgagatctttccatgggatttgttggcggtgtgaccggc
gtttttacgaaaccttacgagggagccagcaaggagggcgtgtccggattcttcaagggt
gttggaaagggtgtggccgggctggttacccggcctaccggcggtattgttgacttcgcc
agtggaacttttgacaccgttaaacgtgccacagaggtcggagatgaatttaagcgtgtg
cgaccggcgcgttacatccatcctgatggtgtagtccggtattatgaccggaaggaagct
gagggtcagcgtatactcagtcaggtagagaagggcaggtatgctgcagaggacacctac
atgcttcacgaatacacaattccggataaagaggttttcttggtgacaaataaacgtctt
ctgtatttacatacagtattgggaagctggagcatggactgggagtttgaattcagtaga
atccagggtccacccagtgtactacaggaaggaggaagatggtacattataatccaaccc
ttggaggaaaagaagaatatactgggaggactgttcactaaaaactccgggatgaaagtt
ttcctacctgaaggttcaaataaagggtcagcccagctgcttgccagggtcattgaagat
ctcaggacttccaagaacaattttgagaccatcttcattgagatgattcagcggaaagct
aaactaaactga
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integrated database retrieval system
