Eurytemora affinis: 111714340
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Entry
111714340 CDS
T07296
Name
(RefSeq) ATP-dependent RNA helicase DDX3X-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
eaf
Eurytemora affinis
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eaf03019
]
111714340
03041 Spliceosome [BR:
eaf03041
]
111714340
03036 Chromosome and associated proteins [BR:
eaf03036
]
111714340
Enzymes [BR:
eaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111714340
Messenger RNA biogenesis [BR:
eaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
111714340
mRNA cycle factors
Common to processing body (P body) and stress granule
111714340
Spliceosome [BR:
eaf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
111714340
Chromosome and associated proteins [BR:
eaf03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
111714340
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
HEM4
Motif
Other DBs
NCBI-GeneID:
111714340
NCBI-ProteinID:
XP_023345190
LinkDB
All DBs
Position
Unknown
AA seq
708 aa
AA seq
DB search
MSNAPNQHVNGLDQQSADLSQPGGGDGPGPKVRYVPPHARKQGSGGQEERYDSRGGGGGG
YRNGGGSGGKVWDDTRGSYVRDSGRDGYRDDRGGPSRGGGGNWGDRDGGNRNGALPTNDR
WKEPPRDSYNSRDGGYGGGVSNGGARRDDRGRSNEAEDWTKPLPRNERLELELFGTGHGP
SGINFDRYEDIPVDATGNDVPKGIDSFEDVTLTPIIQANIELAQYTKPTPVQKNSIPVIL
GKRDLMACAQTGSGKTAAFLVPILNRIFEDGPAPGLSGNVGGGYGRRKQYPFALVLAPTR
ELATQIYDEARKFAYRSRVKPCVVYGGANVADQMRDLDKGCHLLVATPGRLVDFLERGKI
SLEFCRYLCLDEADRMLDMGFEPQIRRIVEKDNMPKPENRQTLMFSATFPKEIQMLARDF
LKDYVFLAVGRVGSTSENITQKIVWVEEQDKRSFLLDLMDAAGLAEKSADGSASRTLVFV
ETKKGADQLDEFLYQEGFPVTSIHGDRTQREREEALKRFKSGQTPIIVATAVAARGLDIA
NVKHVINYDMPSDVEEYVHRIGRTGRMGNLGLATSFFNDKNRNLVKDLVELIVESNQELP
SWLEAMSLENRGYQPNRRGGKGGKFGGSGFGGKDYRFENGGRGGGGGGRGGAGGGRGGGG
YGGGGGGWGTSGSGGGGGSNWSGPAAARNNYGGSYGGGGGGNVDWWDS
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatgcacccaaccagcatgtgaacggtttagatcagcagtctgctgatctaagc
cagcccggaggcggagacggaccaggacctaaagtaagatacgttcctccccacgctcgt
aagcaggggagcggaggtcaagaggaaaggtacgacagcaggggcggcggaggaggcgga
tacaggaacggtggaggaagcggaggaaaagtatgggatgatactaggggatcatatgtt
agagatagtggtcgcgacggctatcgagatgaccgtggtgggcctagccgaggcggtggt
ggcaactggggtgaccgtgacggtggaaacaggaacggtgcgctgccgaccaacgaccgt
tggaaggagccccctcgtgacagttataatagccgcgacggtggatatggtggcggggta
agcaacggcggtgcccgtcgtgacgaccgtggccgaagcaacgaagctgaggactggacg
aaacctttgccgaggaacgagagactggagctcgaactctttggaaccggacatggtcca
agtggaattaacttcgaccgttacgaggatatccctgttgacgcgaccggtaacgatgtc
ccgaaaggaatcgattcctttgaagatgtcacactcacgccgattatccaagctaacata
gagctagctcagtataccaaacctacccctgtccagaaaaattcaattcccgtgattctg
ggaaaacgtgatctgatggcgtgcgcccaaaccggttccggtaaaaccgcggcgttcctt
gttccaatcctcaacaggattttcgaagacggaccagcccccggcctcagcgggaatgtt
ggaggaggatacgggcgaaggaagcagtatccattcgcccttgtgctcgctcctacaaga
gaattagcgacacaaatttacgatgaagcgagaaagttcgcttatagatccagggtgaaa
ccctgtgttgtatatggaggagctaatgtagcagatcaaatgagagatttagacaagggt
tgtcatctactagtggctactcctggtcgtcttgtagatttcctagagagggggaaaata
tccttggaattctgcagatatctttgtctggatgaagctgatagaatgttggacatgggg
ttcgaacctcagatccgtagaattgtggagaaggataacatgcctaaaccagagaatcgt
caaactcttatgttctctgcaacctttcccaaggagatccagatgctggccagggacttc
ctgaaggactacgtgttcttagcggtcggtagggtcggctccaccagcgagaacatcaca
cagaagattgtttgggtggaggaacaggataaacgatccttcctcctggatttgatggat
gctgctggtttagcagagaagagcgctgatggatcggcaagtcgtaccctggtgttcgtt
gaaactaagaagggagctgatcagctcgatgagttcctttaccaggagggattccctgtc
accagcatacacggagataggacgcagagggagagagaggaggcactcaagagatttaag
tcaggacaaactcctatcatagtcgctaccgctgtcgctgctcgaggattagatattgct
aacgtgaagcacgttatcaactacgacatgcccagcgacgtcgaagaatacgttcacaga
attggtcgaactggtagaatgggaaatctgggtttggcgacctccttcttcaatgacaag
aacaggaacctggtgaaggacctggtagaactgattgttgagtcaaaccaagaactgccc
agctggctggaggctatgtccctggagaaccgaggttaccaacccaaccgccgcggcgga
aagggtggtaaatttggcggatccggattcggcggaaaggattacagattcgagaacgga
ggccgtggtggtggcggaggaggacgaggtggagcaggcggtggacgaggaggtggtgga
tatggtgggggtggcggcggatggggaacttctggaagcggaggaggaggcggaagcaac
tggagcggacctgctgctgctcgaaacaactacggcggaagttacggaggaggcggtggc
ggcaacgttgattggtgggacagctaa
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