Eurytemora affinis: 111714483
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Entry
111714483 CDS
T07296
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
eaf
Eurytemora affinis
Pathway
eaf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111714483
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eaf03019
]
111714483
Messenger RNA biogenesis [BR:
eaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
111714483
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
MMR_HSR1
Ras
G-alpha
Motif
Other DBs
NCBI-GeneID:
111714483
NCBI-ProteinID:
XP_023345371
LinkDB
All DBs
Position
Unknown
AA seq
696 aa
AA seq
DB search
MSRHRFYQNAEDEYSEDEDYGSSYGTSYGEEGGLSRSMENQYVFNRGQSGTTPKMSSFFG
TQVSASSLVDQAEFEMDLEIGAGPIPGGSGAGFNLEIDNNSESPPSKKLSRMDSGFDTSG
LSSEDMVKLNSGLDYILDITGETIPEQTIKQALVNNGFNAEIALNHLLENKSEKESFLKP
ASLKVEGLNLGSLAPPPVIKTITSGTAVGFNTPTTPVAVGFNTPTPTLEKQVFEKFIEKK
RSRSNSPMPKIDTLNIQDKLETRSSSPAPGLATPLKQVNMRKEKIDASEKFKTDRGNKKE
VLNLVVVGHVDSGKSTLMGHLLFKLGNVSQKLLHKYEKDSKKVGKQSFMFAWVLDETDEE
RNRGITMDVGSHTFESEHRIITLLDAPGHRDFIPNMISGAYQADVAVLVINSTTGEFEAG
FEAGGQTREHALLVRSLGVSQLVVAVNKLDTVDWKEERFRDIEQKLRMFLNKQAGFKEKD
LVFIPCSGLTGENLTSPSSIQSLTSWYSGQSLIQAIDNLKTPERAVEKPFRKCILSQFKS
ICVVKSVLVDQMDGQTGYAGDHVTLGITGPDQNSLAPGMVLCDPSQPIPVSAKFKARVVV
FNIDVPITKGFSMVLHYGCVSEQGTVSKLLSLLNKATGEVEKKKPRCLAGNCSAMVEITV
LKPIPIEVYKENRELGRFMMRTGGHTIAAGLITEIC
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgacacagattttatcaaaacgcggaagatgaatattctgaagatgaggattac
gggtcttcttacgggacatcatacggggaggagggagggctatcgagaagtatggagaat
caatatgtttttaacagaggtcaaagtggaacaactccaaaaatgtcctcttttttcggc
actcaggtttctgcctctagtctagtggaccaggcggagtttgagatggatctggagatc
ggagcagggcctatacctggagggagtggggcaggtttcaacctagagatagataataat
tcagaatctccacctagtaaaaaattgtcaagaatggattcaggatttgatactagtgga
ttgtcgagtgaggatatggtcaaattaaactctgggttggattatatcctggatattact
ggggaaactataccagaacaaaccattaaacaagcgttagtgaacaatggctttaatgca
gagattgctctaaaccatcttctcgaaaataaatctgaaaaagaatcatttttaaaaccc
gcatcacttaaggttgaaggattaaatcttggaagcttggcgccacctcccgttataaaa
acgataacatcagggactgctgttggatttaatactccaactactcctgttgctgttggg
tttaatactccaactcctactctggaaaaacaagtttttgaaaagtttattgaaaagaaa
agatcccggtcgaattcacctatgccaaaaatcgacactttaaatattcaggataaactg
gaaaccagatctagttctccagcccctggcttagctaccccactcaaacaggttaatatg
cggaaggagaaaatagacgcatcagagaagtttaaaactgatcgaggaaacaagaaggaa
gttttaaatctcgtcgttgttggtcatgtagatagtggcaagagtacactaatgggtcat
cttttatttaaactcggaaatgtttcacaaaaacttcttcacaaatacgaaaaggattcc
aagaaggtcgggaaacaaagttttatgttcgcctgggttttagacgaaactgatgaagag
agaaatagaggaataacgatggatgtgggatctcatacttttgagtcggaacacagaata
attacattactagacgctccagggcacagagattttataccaaatatgatcagtggtgca
tatcaagcagatgtagcagttctagtaataaattctacaacaggtgagtttgaggctgga
ttcgaggcaggaggacagaccagagaacatgctttattagtcaggtcactgggagtatcc
caactagtggtagcggtcaataagctggatactgtagactggaaggaggagagattccgt
gatattgagcagaagttgagaatgttcctgaacaagcaggccgggttcaaagagaaggat
ctggttttcatcccttgcagtggacttacaggtgagaatctgacaagtccctcttctata
caatcattaacttcatggtattctggacaatcactcatacaggcaatagacaacctaaaa
actcccgagagggctgtggaaaaaccgttcagaaaatgcatcctctctcagttcaaatcc
atctgtgttgtgaagagtgtgcttgttgatcagatggatggacagacagggtatgccggt
gatcacgtgactctaggtataactggtccagaccagaacagtttagctccgggtatggtt
ctctgtgatccctcacaacccatccctgtctcagccaagttcaaggccagggtggtcgtc
ttcaatattgatgttccaatcactaaaggtttctcgatggttctccactatggttgtgta
tctgaacaaggaactgtctctaaactcctttccttactcaacaaggctactggagaagtt
gagaagaagaaacctcgttgtctggccggaaactgctctgctatggtggagataactgtt
cttaagcccatccctatagaggtgtacaaggagaacagggagctgggtaggttcatgatg
agaacaggtgggcacaccatcgctgccgggctcatcaccgagatttgttag
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