Eurytemora affinis: 111715536
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Entry
111715536 CDS
T07296
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15-like
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
eaf
Eurytemora affinis
Pathway
eaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111715536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eaf03041
]
111715536
03009 Ribosome biogenesis [BR:
eaf03009
]
111715536
Enzymes [BR:
eaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111715536
Spliceosome [BR:
eaf03041
]
Complex A
U2 snRNP components
U2 related factors
111715536
Complex B
111715536
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
111715536
Ribosome biogenesis [BR:
eaf03009
]
Eukaryotic type
90S particles
Helicases
111715536
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
AAA_19
AAA_22
SRP54
ResIII
Flavi_DEAD
nSTAND3
ABC_tran
AAA_7
Roc
AAA_25
T2SSE
AAA_29
TsaE
AAA_30
PhoH
ATPase
AAA_16
Motif
Other DBs
NCBI-GeneID:
111715536
NCBI-ProteinID:
XP_023346647
LinkDB
All DBs
Position
Unknown
AA seq
223 aa
AA seq
DB search
MELVSSKRNREEDIRPGLKMNPHSGLPFSPRYFELFRKRCQLPVWDYQEKFLDLLARHQN
ICLVGETGSGKTTQIPQWCVDFSKSMGKKTVACTQPRRVAAMSVAQRVAEEMDVSLGQEV
GYSIRFEDCSGPRTLLKYMTDGMLLREAMSDPMLENYQVILLDEAHERTLATDILMGVLK
TVVTHRLIPFQLYQKKKNKCPLFLILIHWIFAIIEYNILCILM
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atggagttagtgagctctaaacggaaccgtgaggaggatatccgccctggtttaaagatg
aatcctcactctggtctgcccttttctcccagatatttcgaacttttcaggaaaagatgc
cagctccctgtctgggattatcaggaaaagtttctagatctcttggctcgacaccagaat
atttgtttagtcggagaaacaggttctggaaagacgacccagatcccccagtggtgtgta
gatttctctaaatctatggggaaaaagacagtcgcctgtactcaacccaggagggtggca
gctatgtctgttgcgcagagagtagcagaagagatggatgtatccttaggtcaggaggtt
gggtactctatcaggtttgaggattgttctgggcctagaactcttctcaagtacatgact
gatggtatgttgctgagagaagctatgagtgatccaatgttagagaactatcaggttata
ttgcttgacgaagctcacgaaaggactctagcaactgatattctcatgggggtgctcaag
actgttgttacccacaggttgatacctttccaactctaccaaaaaaaaaaaaataaatgt
ccattatttttaatcttgattcactggatattcgcaattattgaatataatatactctgt
atattaatgtga
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