Eurytemora affinis: 111715607
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Entry
111715607 CDS
T07296
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
eaf
Eurytemora affinis
Pathway
eaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111715607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eaf03041
]
111715607
03009 Ribosome biogenesis [BR:
eaf03009
]
111715607
Enzymes [BR:
eaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111715607
Spliceosome [BR:
eaf03041
]
Complex A
U2 snRNP components
U2 related factors
111715607
Complex B
111715607
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
111715607
Ribosome biogenesis [BR:
eaf03009
]
Eukaryotic type
90S particles
Helicases
111715607
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
SRP54
AAA_19
AAA_22
Flavi_DEAD
ResIII
nSTAND3
AAA_7
Roc
HTH_IclR
AAA_25
Motif
Other DBs
NCBI-GeneID:
111715607
NCBI-ProteinID:
XP_023346732
LinkDB
All DBs
Position
Unknown
AA seq
706 aa
AA seq
DB search
MSKRRLEIDTVSSKRNREEDIRPGLKMNPHSGLPFSPRYFELFRKRCQLPVWDYQEKFLD
LLARHQNICLVGETGSGKTTQIPQWCVDFSKSMGKKTVACTQPRRVAAMSVAQRVAEEMD
VSLGQEVGYSIRFEDCSGPRTLLKYMTDGMLLREAMSDPMLENYQVILLDEAHERTLATD
ILMGVLKTVVTHRPDLKLVIMSATLDAGKFQGYFDNAPLMNVPGRTHPVEIFYTPEPERD
YLEAAIRTVVQIHMCEEVDGDLLLFLTGQEEIEEACKRLKREIDNLGPDVGDMKCIPLYS
TLPPNLQQRIFEPPPGKKANGAIGRKIVVSTNIAETSLTIDGVVFVIDPGFSKQKVYNPR
IRVESLLVSPISKASAQQRAGRAGRTKPGKCFRLYTEKAYKNEMQDNTYPEILRSNLGAV
VIQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALDDDGNLTELGAIMAEFPLDPQ
LAKMLIASCEYNCSNEILSIVSMLSVPQCFVRPNEAKKASDDSKLRFAHIDGDHLTLLNV
YHAFKQNMEDPQWCYDNFVNYRSLKSADNVRQQLCRIMDRFNLKRTSTDFTSKDYYLNIR
KALCSGFFMQVAHLERTGHYLTIKDNQVVQLHPTTCLDHKPEWILYNEFVLTTKNYIRTC
TDVKPEWLVRVAPQYYDMNNFPQCEAKRQLEQIIAKINSRQYQKGF
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagcgacggctagagattgatacggtgagctctaaacggaaccgtgaggaggat
atccgccctggtttaaagatgaatcctcactctggtctgcccttttctcccagatatttc
gaacttttcaggaaaagatgccagctccctgtctgggattatcaggaaaagtttctagat
ctcttggctcgacaccagaatatttgtttagtcggagaaacaggttctggaaagacgacc
cagatcccccagtggtgtgtagatttctctaaatctatggggaaaaagacagtcgcctgt
actcaacccaggagggtggcagctatgtctgttgcgcagagagtagcagaagagatggat
gtatccttaggtcaggaggttgggtactctatcaggtttgaggattgttctgggcctaga
actcttctcaagtacatgactgatggtatgttgctgagagaagctatgagtgatccaatg
ttagagaactatcaggttatattgcttgacgaagctcacgaaaggactctagcaactgat
attctcatgggggtgctcaagactgttgttacccacaggccggatttgaagctcgttatt
atgagcgctacactggacgcaggaaaatttcaaggttacttcgacaacgctcctctgatg
aatgttcctggaagaactcatcctgttgagatcttttatactccagaaccagagagagat
tatctagaggcagccattcgtacagttgtacagattcacatgtgcgaggaggttgatggc
gacctccttcttttcctgactggacaggaggagatagaagaggcgtgtaaacgtcttaaa
cgtgagatagataaccttggaccagacgtaggggatatgaagtgtatacccctgtactcc
acccttcctccaaaccttcaacaaagaatattcgaacctcctccaggaaagaaagctaac
ggggcaatcggacgtaagattgttgtatcaacaaatattgccgagacaagtttgacaatt
gacggagtcgtcttcgtcatagatccaggcttctcaaaacaaaaggtttacaatcctcga
atccgtgtggagtctcttctcgtctctcccatcagtaaagcatcagctcagcagcgcgca
ggtcgagcaggacgaacaaagcctggtaaatgtttccgactgtatacggagaaggcatac
aagaacgagatgcaggataatacatacccggagattctcagatctaacctgggagctgta
gtaatccagctgaagaagcttggtattgatgatctggttcattttgatttcatggatcca
cctgctcctgaaaccttgatgagagctttggaacttctcaactaccttgctgctctagat
gatgatggtaatctaacagagttgggagctatcatggcagagttccctctggatcctcag
ctagctaaaatgctcattgcatcttgtgagtataactgttccaacgagatcctatccatc
gtgagcatgctctctgttccccagtgcttcgtgagaccaaacgaggccaagaaagcgtct
gatgactctaagttgagatttgcgcatatagacggtgaccacctgactttgttgaacgtg
taccacgccttcaagcagaatatggaggatccacagtggtgctacgacaactttgtcaac
tacagatcactaaagagtgcagataacgttagacagcagttgtgcaggattatggacagg
tttaatctgaaaagaacaagtacggatttcacgagcaaggattattatctgaacatcagg
aaagcgctctgctcgggatttttcatgcaggtcgcacatctggagagaactggacattat
ttgacaattaaggataaccaggttgtccagcttcatccgaccacgtgcctggaccacaaa
cccgagtggattctctacaatgaattcgtcctcaccaccaagaactacatcaggacctgc
acagatgtcaagccggagtggttggtcagagttgcacctcagtactacgatatgaacaac
ttccctcagtgtgaggctaaacgacagctggagcagattatcgccaagattaattcccgc
cagtaccagaagggattctaa
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