Eurytemora carolleeae: 111716917
Help
Entry
111716917 CDS
T07296
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1 isoform X1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
eaf
Eurytemora carolleeae
Pathway
eaf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
111716917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eaf03021
]
111716917
Enzymes [BR:
eaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
111716917
Transcription machinery [BR:
eaf03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
111716917
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
111716917
NCBI-ProteinID:
XP_023348194
LinkDB
All DBs
Position
Unknown
AA seq
1363 aa
AA seq
DB search
MLKSLRGDTPASQLDNVWKELQLSVDHVLDKNLNSAKSGASVNGWGLKQLIERKQGIFRM
NMMGKRVNFACRTVITPDPNINIDEIGVPEIFAKRLSYPVPVTPWNFKELQQMVLNGPDN
HPGALLVEDEFGKPINLEMKDPSQRLMIANTLMTPTYSNKKSDRPKIVHRHLRNGDAMLL
NRQPTLHKPSIMAHKARVLRGEKVMRLHYSNCKSYNADFDGDEMNAHFPQSETARSEAYN
IALSSHQYLGPKDGTPLQGLIQDHVIGAVKMTLRGRFFSRPEYMQLVFQALQGIPGRIKI
QAPTILKPKQLWSGKQVISTILINLVPAGKFPPNFTSTAKISPKLWQSQPERAWKAGGTP
LKKMIDMSESEFIVRDGILCVGILDKNQFGATPYSLAHLLFELYGGIVCTSFLSGLSKLF
TYFLQGIEGFSLGVQDILVTETANDVRTAVMADTRQVGDSCAAQGVGAKGEVDIDELRFM
MEETHRASADNPRFRMELDRGYKEKLNPATNRINAVCVPAGLIKPFPHNNLQLMVNSGAK
GSTVNTTQISCLLGQIELEGKRPPIMISGKSLPSFRPYDTQPRAGGFIDGRFMTGIQPPE
FFFHCMAGREGLIDTAVKTSRSGYLQRCLIKLLEGLTVHQDYTVRDSDNSVIQFQYGEDS
LDVCKSQYIKPSRLKDLSNNINSVMNKEREKRAKEMSDMKGIKKEKKKLKEWRKYGGGER
KRTGAFLKFSQCSDTIKKQFKGYEKIKVGKEDPIFVSRAKSYLPTLSEYRNLNDSIIADL
KESQGPSMPPLSSTFLPPVHFSAITEACDAMISEYIKQNKDTVDCHNFKDTMYLKIQESC
VAAGEPVGVLAAQSVGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASDNIKTPSL
TIPFKQGITEKEMDKFRLKFNKVVVENLLEEVQVTEKIVLSPARLRKVVLRFKFLPYKYY
KQDYGVTQHQVLQYMENKFFHKVFFPVMVAVSKEKKVGVDVGQDMDLKIDRGGGVGGDRD
EDEGEGGDVTKERRNEETADKAMGDVDSSDDEQEDMEGEGTDVTRKVERQGDREYEELEE
VEIKIKDELVKQEDDEYNDDKDDVKNESSPVSEDENYESEEEEDEERNETIQDELMSSGE
PRKRRAEFLAQMEGVCGLCGVTDYSYDTEKERWCEITLSFDISQKRIDMPNILRKSAEKG
LIYQVKNMKKGFVMEKDGRYMIQTDGINIDVMLHYDKILDLNNLMCNNIHDMARYYGIEA
AYKTIVREVTNVFGVYGIEVDYRHLSLIADYMTQDGRYRPFNRVGIESNPSPFQQMTFET
AMGFLRSSTLGARCDELNSPSACIVLGKPTKGGTGSVNLRYAL
NT seq
4092 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagagtcttagaggtgatactccagctagtcagctagataatgtttggaaggag
ttacaactgtcagttgatcatgttctcgacaagaatttaaattcagccaaatctggagca
tcggtgaacggctggggattaaagcagttgattgagagaaaacagggaatcttcagaatg
aatatgatggggaagagagttaatttcgcttgcagaactgttataactcctgatcctaat
ataaacattgacgagatcggagtcccggaaatattcgccaagaggctcagttaccctgtt
cctgtgactccttggaacttcaaggaactacaacaaatggtcttaaatggtccagataat
catccaggtgccctattggtggaagatgagtttggtaaacctataaacctagaaatgaag
gatcctagtcaacggttaatgattgccaacaccttgatgaccccgacctacagcaacaag
aagtcagatcgaccaaagattgttcaccgtcacttgcgcaacggagacgccatgttgctt
aatcgtcagcctactctgcataagcccagtattatggctcataaggcaagggtactgaga
ggagagaaggttatgagactgcattactccaattgtaaatcctacaatgcggattttgat
ggtgacgagatgaatgctcattttccccagtcagaaactgccaggagtgaagcatacaat
atagcactgtcaagtcatcaatacctgggtcctaaagatggtacccctctacagggtctt
attcaggaccatgttatcggagcagtgaaaatgaccctgagaggtcgtttcttttccaga
cctgagtacatgcagcttgtgtttcaagccctacagggcatcccaggcagaataaagatt
caggcccccaccattttgaaaccaaaacagctgtggtcgggaaagcaggttatttcaaca
atcttgataaatctggtacctgctgggaagttcccgccaaattttacctcaacagctaaa
atcagtcctaaactctggcaatcccaacctgaacgagcctggaaagctggtggaactccc
ctcaagaagatgattgatatgtcagaatctgagtttatagtacgagatggtatactttgt
gttggaatcttggacaaaaaccagtttggtgccacgccctactcactggcccacctcctc
tttgagctgtatgggggaatagtctgcaccagcttcctgtcaggactctcaaaactcttc
acctacttccttcagggcatagaggggttctcactaggagttcaggatattcttgtgaca
gaaactgcaaatgatgttagaactgcagtaatggcggacaccagacaagtcggggattca
tgtgctgcacagggtgtaggtgctaagggcgaggttgatattgacgagctaagatttatg
atggaagaaacacacagggctagtgctgacaatccaagattccgtatggaacttgacagg
ggatacaaggagaagctgaaccctgccactaacaggatcaatgccgtttgtgtccccgca
ggacttatcaaaccattccctcataataatcttcagctcatggtcaactcaggggctaaa
ggtagtacagtaaacacaacccagatttcttgtctcctgggtcagattgagttggagggg
aaaaggccaccaattatgataagtggaaaatcccttccttccttccggccatacgatact
cagcctcgggccgggggctttattgatggacgatttatgacaggaatccagccccctgaa
ttcttcttccattgtatggcaggaagagaaggtttgattgatactgcagtaaagactagc
agatcagggtatcttcagcgttgtcttataaagttgctagaaggtttaactgtacatcaa
gattatactgtcagggactctgataactctgtgatacagtttcagtatggagaggactca
ttggatgtttgtaaatcccagtatatcaaacctagtcgtctcaaggatctctcaaacaac
atcaactctgttatgaacaaggagagggaaaaaagagcaaaggaaatgagtgatatgaag
gggataaagaaggagaagaagaaactgaaggagtggaggaagtatggaggtggggagagg
aaaagaactggagctttcctgaaattctcacagtgcagtgatactataaagaagcagttc
aaaggatatgagaagattaaggtaggtaaggaggaccctatatttgtatccagagctaag
tcatatctcccaacattgtctgagtataggaacctcaatgatagcatcatagctgacttg
aaggagagccaaggtccttcaatgcctcccctatcctccactttcttgcctccagtacac
ttctcagccatcacagaggcctgtgatgctatgattagtgagtatattaagcaaaacaag
gatactgtagactgtcataacttcaaggacaccatgtacttaaagattcaggaatcctgt
gttgctgctggggaaccagttggtgttttagctgcacagtcagttggtgagcccagtact
cagatgacactaaatactttccattttgctggtcggggagagatgaatgttaccctggga
attcctcgtcttagggagattttaatggtagcgtcagacaatattaagaccccaagcctg
acaattccattcaaacaggggatcacagagaaggagatggataagttcaggttgaagttc
aacaaggttgttgtggagaatttactggaggaggttcaggttacagaaaagattgtgctc
agtccggcacgactccgtaaagtggttctccggtttaagttcctgccttacaagtactat
aaacaggattatggggttacacagcaccaggttctacagtatatggagaacaaattcttt
cacaaggtgttctttcctgtgatggttgctgtgagtaaggagaagaaggtgggtgtagat
gttggacaggatatggatcttaagatagatcgtggaggtggagttggaggggatcgtgat
gaagatgaaggggagggtggggatgttacaaaggagagaaggaatgaggagactgctgat
aaagctatgggagatgttgatagcagtgacgatgaacaggaggatatggagggggaggga
acagatgtgaccaggaaggtggagaggcagggggacagggagtatgaggaactggaggag
gtcgagatcaagatcaaggatgaacttgttaaacaggaggatgatgagtataatgatgat
aaggatgatgttaaaaatgaatcctcacctgtatccgaagatgaaaattatgaatcagag
gaagaggaggatgaagaaagaaatgagacaatacaagacgagctgatgagtagtggtgag
cctaggaaacgacgagctgagttcctggctcaaatggagggtgtgtgtggactatgtggt
gttacagactactcctatgatactgaaaaggaacgttggtgtgaaattactctcagtttt
gatatttcccagaagaggattgatatgccaaacatactcaggaaatccgctgagaaaggt
ttaatctaccaagtgaagaacatgaagaaaggatttgttatggagaaggatggacggtat
atgatccagactgacggaatcaatatagatgtcatgcttcattacgataaaatccttgat
cttaataatttgatgtgtaataatattcacgatatggctaggtactatggtattgaggcc
gcctataagactattgtacgtgaggtgactaacgtgttcggagtctatggtattgaagtt
gattacaggcacttgagtctgatagctgactacatgacccaggatgggcgctatagaccc
tttaatagggttggtattgagagcaatccttcaccctttcagcagatgaccttcgagact
gctatgggattcctacgaagttctaccctgggagctagatgtgatgaactaaattctccc
tctgcctgtatagtactaggcaaaccaactaaaggtggaaccggttctgtaaacttgcgc
tatgcactttga
DBGET
integrated database retrieval system
