Eurytemora carolleeae: 111718111
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Entry
111718111 CDS
T07296
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
eaf
Eurytemora carolleeae
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eaf03009
]
111718111
Enzymes [BR:
eaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111718111
Ribosome biogenesis [BR:
eaf03009
]
Eukaryotic type
Pre-60S particles
Helicases
111718111
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
CTE_SPB4
ResIII
TMEM51
Motif
Other DBs
NCBI-GeneID:
111718111
NCBI-ProteinID:
XP_023349384
LinkDB
All DBs
Position
Unknown
AA seq
477 aa
AA seq
DB search
NAKXILETLYRLPVPLTPHEIGALIVSPTRELASQISEVLAEFLKDSEYKLSHRLFVGGN
KVGSDAVTYSEEGGNILVVTPGRIEDLLIGKSSGASVGEHKVSKGLKSLEILVLDEADRL
LSLGFENSVNTILQFCPKQRRTGLFSATQTSEISNLIRAGLRNPVMITVREKGTDANVIS
RTPIKLENFYCLCEPKAKFAQLVEFLLLHKQDKILLFAATCAVVDYFSILLSKLLPGTDV
LAIHGKMKKKRYKIFERFKNLESGLLICTDVMARGVDIPEVNWVLQFDPPSNAESFVHRC
GRTARIGNQVELDKTSLPEPNQDYIETIRQFAIEDRAVFDKGNRAFVSYIQSYSKHECNV
LLKIKDLDLGGVASSYGLLKMPRMPELKKIQIQNFTPAAGVDVNSIKYSGQFIINCLCFH
DKRRDKKQRRAEKRSMKGEKEVEEDKEDEEEFEAGKMKSSKFDEAIELDNMSDVEES
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
aatgctaaanctatcctggagaccctctacaggcttcccgtcccattgactccacatgaa
attggagctctgattgttagtcccaccagagaactagcttcacagatcagtgaagtttta
gcagagttcttgaaggattctgaatacaaattatcccatagattatttgtcgggggaaat
aaagttggttcggacgcagtaacctactccgaggaggggggaaatatccttgttgtaact
ccaggacggattgaagatcttctcattggcaaatcctcaggtgcatctgttggtgaacac
aaggtttccaagggtttgaaaagtttagaaattctagttctcgacgaggcagacagatta
ctcagtttgggatttgaaaacagtgtaaacacgatccttcagttctgtcctaaacagaga
agaaccggtttattctcagctacacagacatcagagatatcaaatcttatcagggcaggg
ttaagaaaccctgtaatgataactgtgagagagaaaggaactgatgctaatgtaatctca
agaactccaatcaaactagaaaatttctattgtctctgtgaacctaaggctaaatttgcc
caactagtggagttcctgctcttacataaacaggataagatcctattgtttgctgccacg
tgtgctgtagtggattatttctctatcctgctctcaaaacttttacctggaactgatgtc
ctagctatccatgggaagatgaagaagaaaagatacaagatttttgaaaggtttaagaac
cttgaatcaggactcctaatctgtacagatgtaatggcgagaggggttgatattccagag
gtcaactgggttctacagtttgatcctccaagcaatgcagaatcctttgtgcacagatgt
ggcagaactgctagaattgggaatcaggttgagctggataaaaccagtttaccggaaccc
aaccaggattatattgaaaccatcaggcagttcgccatcgaggacagagcagtctttgac
aagggaaatcgtgcatttgtctcctatatccagtcctattctaaacatgaatgcaatgtt
ctcttaaaaataaaggatcttgatctgggtggggtagcgagctcctatggtttgctcaag
atgcctcgtatgccagaactcaagaaaatacagattcaaaactttactccagctgcaggg
gtagatgttaacagtattaaatattcaggtcaattcatcatcaactgtttatgttttcat
gataagcggcgggataagaagcagcgcagagcagagaagaggtcaatgaagggggagaag
gaggtggaggaggacaaagaggatgaggaggagttcgaggcgggtaagatgaaatcttcc
aagtttgatgaagctatagaactagataatatgtcagatgtagaggaatcttaa
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