Eurytemora carolleeae: 111718136
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Entry
111718136 CDS
T07296
Name
(RefSeq) ATP-dependent RNA helicase Ddx1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
eaf
Eurytemora carolleeae
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eaf03041
]
111718136
03016 Transfer RNA biogenesis [BR:
eaf03016
]
111718136
Enzymes [BR:
eaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111718136
Spliceosome [BR:
eaf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
111718136
Transfer RNA biogenesis [BR:
eaf03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
111718136
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
DUF7111
CMS1
Motif
Other DBs
NCBI-GeneID:
111718136
NCBI-ProteinID:
XP_023349415
LinkDB
All DBs
Position
Unknown
AA seq
732 aa
AA seq
DB search
MTAFEEFGVMPEIGKAVDDMDWNLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPI
LQITWETLKDFQDGKVGGKVGDEKSASSHWAMSFFDRGPALAVTPDGLRCQSREQREWHG
CRATKGVVGKGKYYYEATVTDEGLCRLGFSTSQASLDLGTCRFGFGFGGTGKKSNNKQFD
DYGGAFGKADVIGCFLNLDDLEIRFAKNGVDLGRAFSINQQFKNNPFFPAVVLKNAEMQF
NFGDSPFKYPPTNGFVSFSAAPATTVVPNEKKGTNVEERKIINNAPQAIIIEPSRELAEQ
TLKQIQKFKKYLVPPAVTELLVVGGISINDQVAALNSGVDIVVATPGRLEDLINTGKLSL
RQCRFFVLDEADGLLKGGYEKFINRIHQTIPKITSDGKRLQMIVCSATLHSFEVKKMAER
LMHFPAWVDLKGQDAVPETVHHVVVTVDPRTDSSWKSYRNPIQTDGVHAQDRVGPNINTT
EALSEAVKMMKAEYCVRAIRQNKMDYGIIFCRTKQDCDNLERYFNMVGGGRNQNKEFSCV
CLHGDRKPQERKENLEIFKRKEVKFLICTDVAARGLDIGGLPFMINFTLPDEKTNYVHRI
GRVGRAERMGLAVSLVSCIPEKVWYHGEWCPSRGKNCHNTKLTDVKGCCIWYNEPQYLAD
IEEHLGVTIPQVDTDIKIEADEFDGKVVYGQKKKSAGSGYEGHSTQLASTVALLSDLETQ
AQDIFLRNLHKR
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgacggcatttgaagagtttggggtgatgcccgagatagggaaggcagtggatgatatg
gactggaaccttcccactgatgttcaggcagaagctatacctttgatactgggtggtggt
gatgttcttatggcagctgaaactggaagcggtaagacaggagccttttgtttaccaatt
cttcagattacttgggagacattgaaggattttcaggatgggaaggttggaggtaaggta
ggggatgaaaaatctgccagctcacattgggcaatgtcattctttgataggggacctgcc
cttgctgtcacgccagatggactacgctgccagtctagggagcagagggaatggcatggt
tgtcgagcaactaagggagttgtagggaaaggtaaatactactatgaagctacagtgaca
gatgagggcctatgtaggctagggttctctacttctcaagcttctctagaccttggaacc
tgtcgatttggttttggatttggaggaaccggaaaaaagtcaaacaataaacaatttgat
gattatggaggggcctttggaaaagctgatgtcatcggttgcttcctaaacctggatgat
ctggaaataaggtttgctaagaacggagttgatcttggtagagcatttagcatcaaccaa
cagttcaaaaacaaccctttcttccctgcagttgtgctcaagaacgctgagatgcagttt
aactttggagactctccctttaaatatccaccaaccaacggattcgtcagtttttctgct
gcacctgctaccactgtagtaccaaatgagaaaaagggaacaaatgttgaagaaaggaaa
atcattaataatgcacctcaggctataataattgagccaagtagagagttagcagaacaa
actctaaaacaaattcaaaagtttaagaagtatcttgttccaccagcagttacagaactc
ctcgtggttggtgggatcagcattaacgatcaagttgccgcgttaaattcaggagttgac
atagttgttgcaacacccggacgtttagaggatctcattaatacaggcaaactaagcctc
agacaatgtcgattttttgttcttgatgaggctgatggtctgctaaagggtggatatgaa
aagtttattaacagaatccatcaaactattcctaaaattacaagtgacggaaagaggttg
cagatgatcgtatgttctgcaacattgcattcgtttgaagttaaaaagatggccgagaga
ctaatgcatttccccgcatgggttgatctgaagggccaggatgctgttcctgaaacagtt
catcacgtggtggttacagtagatccaaggaccgactccagctggaaatcctaccgtaac
cctatacagacagatggagtgcatgcccaggatagggttggaccaaatattaatactaca
gaagcattgtccgaggcagtcaagatgatgaaggcagaatactgtgttagagcgatccgg
cagaataagatggactacggtattatcttctgcagaaccaagcaggactgtgacaatcta
gagcgctactttaacatggtaggagggggaaggaatcagaacaaggagttcagctgcgtc
tgccttcacggagacaggaagccgcaggagaggaaggagaacttagagatattcaagaga
aaggaggtgaagtttttaatttgcactgatgtagctgcgaggggattggatatcgggggt
ctccctttcatgatcaacttcactctaccagacgagaaaactaactatgtgcacagaatt
ggacgagttggtcgagctgagagaatgggattggccgtctccctagtttcctgcatccca
gaaaaggtttggtaccacggtgaatggtgtccttcaagagggaaaaattgtcacaataca
aaattaacagatgtaaaggggtgctgtatctggtataatgaacctcagtatctggcagat
attgaagaacaccttggggtcactattccacaggtggatacagatataaagatagaggca
gacgaatttgacggaaaagttgtttacggtcagaagaagaaatccgcaggttcagggtat
gaagggcactctacccagcttgcctctactgtcgccctgttatctgatctggaaacacaa
gcccaggatatttttctcaggaatctccacaagcgctaa
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