Eurytemora affinis: 111718200
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Entry
111718200 CDS
T07296
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit pan3-like isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
eaf
Eurytemora affinis
Pathway
eaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111718200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eaf03019
]
111718200
Messenger RNA biogenesis [BR:
eaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111718200
mRNA degradation factors
3'-5' decay
Pan complex
111718200
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
HIGH_NTase1
DUF7791
Motif
Other DBs
NCBI-GeneID:
111718200
NCBI-ProteinID:
XP_023349498
LinkDB
All DBs
Position
Unknown
AA seq
718 aa
AA seq
DB search
MMEQMYLPYTSSSPGPYRHMGPGGPPQGSKLGTYMNRGVGGPNPNTGQYQDMSSKINSLS
LDPGMKIMNRQSSAPGRGLSPSSPGFVNPRFPSLNSGMQGPGGSMYGGGGPSFKLPAPIQ
SYPVVYGRPPPLGPPRLNLDKDAILRDMEKRTGGAASRLSPTMRLNPAAQLQNPPPMRPT
GNVTPQPSPEQEAQAAASAAKVTVFSENGTTYFYNPDETLPSQLSTGQVVGNSLLVPNWS
AYSGTPSQVVAMKVRNAAPTSLQESETKMELITRQMICHTIPDPQENQDIPSEVDNFTSL
CPLEPPASSPLHKSSTFSYVTTVYKSVNIKTGQHMCLRRIHGYRLVNTKCMGLVEQWKKM
SHSNLVTLRQVFTSKSFNDHSMIFVYDYYPGSETLMTRHFSSELNPQIDPYNGDTSRPYS
QNKNLMRHQPAAINNTGLLAEALIWNYVIQLTSALRYIHSAGLACRTLDPTKILVLGRCR
LLLNCSGIFDVLTYDPNSANPMAAMSVYQQEDLVSLGRIVLALACNSFHAIQREQVQQSM
ELVTSNYSSDLRNLIMYLLTNSQRVKSVNDLMPMIGARFYTALDSAMQRSEMLEQELARE
LESSRIVRLLTKLSTVVDRPEFNMDVTWSETGDRYMLKLFRDYLFHQITEDGRPFLDMSH
VITNLNRLDAGIPDQLGLMSRDEQNVLVVTYSELKNCLEQSFAELVGAASSKPKNIGL
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgatggaacagatgtatcttccctacactagttcttcccccggtccatacagacacatg
ggaccaggaggaccaccccagggaagtaagctgggaacatatatgaatagaggagtcggg
ggccctaatccaaacacaggccaatatcaggatatgagcagtaaaataaacagtctgagt
cttgatcccgggatgaaaattatgaacagacagtcctcggctccaggtagaggtttgtct
ccgtcttctccagggtttgtaaacccacggtttccttctctaaactcagggatgcaaggt
ccaggaggcagcatgtatgggggaggaggaccaagctttaaactaccagcacccattcaa
tcatatcctgtagtgtacggccgccctccgccccttggcccaccacgccttaatttggat
aaagacgccatattgcgagacatggagaaaaggacgggtggagctgcaagtcgtctatca
ccgactatgcgcctgaatcctgcggctcagctacaaaaccctccgccgatgcgtcctacg
ggtaatgttacgccacagccgagtccggaacaagaggctcaggcggcggcatcagctgcg
aaggttactgtattttctgagaatggaacaacctatttctataatcctgatgaaactcta
cccagccaactttctacaggacaggttgtagggaacagtttgctagttccaaattggtct
gcttattctggtacgccgagccaggttgtagccatgaaggtcaggaacgctgcgcccact
tcgcttcaagaaagtgagacaaagatggaattaataactcggcaaatgatctgtcacact
ataccagatccacaagaaaaccaggatattccttcagaggttgataacttcacctccctg
tgtcctcttgaacctccggcctcctctcctctacacaaatcctcgactttcagttacgtg
acaacagtttataaatctgtaaatattaagactgggcagcatatgtgtctaagaagaata
cacggatacaggttggtgaatactaagtgtatgggtttagtggagcaatggaagaaaatg
tcccactcaaacttggttaccttgagacaggtgtttacaagtaaatccttcaacgaccac
tcaatgatatttgtttatgattattaccccgggtcagaaactctaatgacgagacatttc
agcagtgagctgaatcctcaaattgatccatacaacggggatacgagcagaccgtattct
caaaacaagaatctaatgagacatcaaccagctgcaatcaataatacaggattgcttgcg
gaggcattgatctggaattatgtaatacagttaacatcggcactacggtacatacactct
gcagggttagcctgtaggaccctggatccgactaaaatcttggttttgggccgatgtcgt
cttcttcttaactgtagcgggatatttgatgtactcacctacgatccgaactcagccaac
cctatggccgccatgtctgtttatcagcaggaggacctggtgtcccttggacgtattgtg
ctggccctggcctgcaactccttccacgcgatccagagggagcaggttcagcagagtatg
gagcttgttaccagcaattacagctctgatttacgaaacctaatcatgtacctactgacc
aattcacagagagtcaagtcggtcaatgacctcatgcccatgataggtgcccggttctac
acggcattggacagcgctatgcagagatcagaaatgcttgagcaggagttagcaagagaa
ctagagagtagtagaatagtacgcctgcttaccaaactctccacggtagttgaccggcct
gagttcaatatggatgtcacgtggtcagagactggggatagatatatgctgaagctgttc
agggattatctatttcatcagatcacagaggatggaagaccttttcttgatatgtctcac
gtgatcacgaatctgaatcgtcttgatgctggtatcccagatcagcttggtttaatgtcc
cgagatgagcagaacgtgttggtggtgacttactccgagctcaaaaactgcttggagcag
agctttgcggagcttgtaggagctgcttccagcaaacccaagaatattgggttgtaa
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integrated database retrieval system
