Ensifer adhaerens Casida A: FA04_00100
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Entry
FA04_00100 CDS
T04507
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
eah
Ensifer adhaerens Casida A
Pathway
eah02020
Two-component system
eah02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
eah00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FA04_00100
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FA04_00100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eah03021
]
FA04_00100
Transcription machinery [BR:
eah03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FA04_00100
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GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Arg_repressor
Motif
Other DBs
NCBI-ProteinID:
ANK71168
UniProt:
A0ABY8HFC7
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All DBs
Position
complement(17909..19447)
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AA seq
512 aa
AA seq
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MALSASLHLRQSQSLVMTPQLMQSIQLLQMTHLELNQFIAQEVEKNPLLEFQANDDQVAP
EQGEMAGGDERGGSDDGGGQADLYDSATSQSGERLDDQLDADFANVFQDDTTPQRADAPE
LLGQWKSMPGGGEGEDYDLDDFVAGRKSLRETLLEQLPFALPAPSDRLIAQHLIDLLDDA
GYLQADLGEVGERLGAAHADVLRVLLTLQQFDPPGVFARSLGECLAIQLRARDRLDPAME
ALLANLELLARRDFATLKKICGVDEEDLIDMLAEIRKLDPKPGTSFETSVSEAIVPDIVV
RAAPDGSWMVELNPDALPRVLVNQDYFALVSRGTQKNSADQAFLNECLQNANWLTRSLDQ
RARTIMKVATEIVRQQDAFLVNGIGHLRPLNLKTVADAIKMHESTVSRVTSNKYMLTPRG
LFELKYFFTVSIGSAEGGDSHSAESVRHKIRTLIHEESTEAVLSDDDIVDVLKKAGIDIA
RRTVAKYREAMNIPSSVQRRREKRALAKAAGF
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggccctgtccgccagccttcatctgcgccagtcccagtctctggtgatgacgccacag
ctcatgcagtcgatccagctgctgcagatgacgcatcttgagctcaaccagttcatcgca
caggaagtcgaaaagaacccgctgctcgaatttcaggcaaatgacgatcaggtcgccccg
gagcagggcgagatggccggcggagacgagagaggcggaagcgacgacggcggcggccag
gcggatctctatgacagcgccacgtcgcaaagcggcgagcggctcgacgaccagctcgat
gccgatttcgccaatgtcttccaggacgacaccacgccgcaacgcgccgatgcgccggaa
ctgcttggccagtggaaatcgatgcccggcggcggcgagggcgaagattacgacctcgac
gatttcgtcgccggccgcaagagcctgcgcgaaacgctcctggagcaattgcccttcgcg
ctgccggctccttccgatcgactgatcgcgcagcatctcatcgatctgctcgacgacgcc
ggctacctgcaggcggacctcggcgaggtcggcgaacggctgggtgccgcccatgccgat
gtcctcagggtgctgctgacgctgcagcagttcgatccgcccggtgtatttgcccgctcg
ctcggcgagtgtctcgccatccagctgcgcgcccgcgaccggctcgatccggcgatggag
gcgctgcttgccaatctcgaactcctggcgcggcgtgatttcgcgacgctgaagaagatc
tgcggcgtcgacgaggaagacctgatcgacatgctggcggaaatccgcaagctcgacccg
aagcccggcaccagcttcgagaccagcgtcagcgaggcgatcgtgcccgatatcgtcgtg
cgggcagcgcccgacggctcatggatggtcgaactcaatccggatgcgctgccgcgcgtt
ctggtcaaccaggactacttcgctttggtgtcacgcggcacacagaaaaacagcgccgac
caggccttcctcaacgaatgcctgcaaaatgccaactggctgacgcgcagcctcgatcag
cgcgcccgcacgatcatgaaggtcgccaccgagatcgtgcgccagcaggacgcgttcctc
gtcaacggcatcgggcacctcaggccgctgaacctcaagaccgtcgccgacgccatcaag
atgcatgaatcgaccgtcagccgcgtcacctcgaacaagtacatgctgacgccgcgcggg
ctgtttgagctcaagtatttcttcaccgtctcgatcggctcggccgagggtggcgacagc
cattcggcggaatccgtgcgccacaagatccgcacgctgatccacgaggagagcaccgag
gcggtgctttctgacgacgacatcgtcgacgtcctcaagaaggccggcatcgatatcgcg
cggcgcacggtcgccaaataccgggaagcgatgaatatcccctcctccgtgcagcgccgg
cgggagaagcgcgcgctcgccaaggccgccggtttctga
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