KEGG   Ensifer adhaerens Casida A: FA04_00100
Entry
FA04_00100        CDS       T04507                                 
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
eah  Ensifer adhaerens Casida A
Pathway
eah02020  Two-component system
eah02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:eah00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    FA04_00100
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    FA04_00100
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:eah03021]
    FA04_00100
Transcription machinery [BR:eah03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     FA04_00100
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID Arg_repressor
Other DBs
NCBI-ProteinID: ANK71168
UniProt: A0ABY8HFC7
LinkDB
Position
complement(17909..19447)
AA seq 512 aa
MALSASLHLRQSQSLVMTPQLMQSIQLLQMTHLELNQFIAQEVEKNPLLEFQANDDQVAP
EQGEMAGGDERGGSDDGGGQADLYDSATSQSGERLDDQLDADFANVFQDDTTPQRADAPE
LLGQWKSMPGGGEGEDYDLDDFVAGRKSLRETLLEQLPFALPAPSDRLIAQHLIDLLDDA
GYLQADLGEVGERLGAAHADVLRVLLTLQQFDPPGVFARSLGECLAIQLRARDRLDPAME
ALLANLELLARRDFATLKKICGVDEEDLIDMLAEIRKLDPKPGTSFETSVSEAIVPDIVV
RAAPDGSWMVELNPDALPRVLVNQDYFALVSRGTQKNSADQAFLNECLQNANWLTRSLDQ
RARTIMKVATEIVRQQDAFLVNGIGHLRPLNLKTVADAIKMHESTVSRVTSNKYMLTPRG
LFELKYFFTVSIGSAEGGDSHSAESVRHKIRTLIHEESTEAVLSDDDIVDVLKKAGIDIA
RRTVAKYREAMNIPSSVQRRREKRALAKAAGF
NT seq 1539 nt   +upstreamnt  +downstreamnt
atggccctgtccgccagccttcatctgcgccagtcccagtctctggtgatgacgccacag
ctcatgcagtcgatccagctgctgcagatgacgcatcttgagctcaaccagttcatcgca
caggaagtcgaaaagaacccgctgctcgaatttcaggcaaatgacgatcaggtcgccccg
gagcagggcgagatggccggcggagacgagagaggcggaagcgacgacggcggcggccag
gcggatctctatgacagcgccacgtcgcaaagcggcgagcggctcgacgaccagctcgat
gccgatttcgccaatgtcttccaggacgacaccacgccgcaacgcgccgatgcgccggaa
ctgcttggccagtggaaatcgatgcccggcggcggcgagggcgaagattacgacctcgac
gatttcgtcgccggccgcaagagcctgcgcgaaacgctcctggagcaattgcccttcgcg
ctgccggctccttccgatcgactgatcgcgcagcatctcatcgatctgctcgacgacgcc
ggctacctgcaggcggacctcggcgaggtcggcgaacggctgggtgccgcccatgccgat
gtcctcagggtgctgctgacgctgcagcagttcgatccgcccggtgtatttgcccgctcg
ctcggcgagtgtctcgccatccagctgcgcgcccgcgaccggctcgatccggcgatggag
gcgctgcttgccaatctcgaactcctggcgcggcgtgatttcgcgacgctgaagaagatc
tgcggcgtcgacgaggaagacctgatcgacatgctggcggaaatccgcaagctcgacccg
aagcccggcaccagcttcgagaccagcgtcagcgaggcgatcgtgcccgatatcgtcgtg
cgggcagcgcccgacggctcatggatggtcgaactcaatccggatgcgctgccgcgcgtt
ctggtcaaccaggactacttcgctttggtgtcacgcggcacacagaaaaacagcgccgac
caggccttcctcaacgaatgcctgcaaaatgccaactggctgacgcgcagcctcgatcag
cgcgcccgcacgatcatgaaggtcgccaccgagatcgtgcgccagcaggacgcgttcctc
gtcaacggcatcgggcacctcaggccgctgaacctcaagaccgtcgccgacgccatcaag
atgcatgaatcgaccgtcagccgcgtcacctcgaacaagtacatgctgacgccgcgcggg
ctgtttgagctcaagtatttcttcaccgtctcgatcggctcggccgagggtggcgacagc
cattcggcggaatccgtgcgccacaagatccgcacgctgatccacgaggagagcaccgag
gcggtgctttctgacgacgacatcgtcgacgtcctcaagaaggccggcatcgatatcgcg
cggcgcacggtcgccaaataccgggaagcgatgaatatcccctcctccgtgcagcgccgg
cgggagaagcgcgcgctcgccaaggccgccggtttctga

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