Ensifer adhaerens Casida A: FA04_04600
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Entry
FA04_04600 CDS
T04507
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
eah
Ensifer adhaerens Casida A
Brite
KEGG Orthology (KO) [BR:
eah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eah03016
]
FA04_04600
Enzymes [BR:
eah01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
FA04_04600
Transfer RNA biogenesis [BR:
eah03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FA04_04600
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
ANK71971
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All DBs
Position
complement(973205..974377)
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AA seq
390 aa
AA seq
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MIETTADLEAACQQLALSNYITIDTEFLRETTFWPELCLIQMASPDLAVIVDPMAKGIDL
APFFALMANPEVIKVFHAARQDIEIIFHLGNLIPHPIFDTQVAAMVCGFGDSVSYDQLVN
RVTGTQIDKSSRFTDWSRRPLTEKQLDYALADVTHLRDIYKYLAAELEREGRSLWLTEEM
AILEARDTYDLHPDDAWQRLKMRVKKPIELAALKTVAAWREREARARNVPRGRILKDDAI
YEIAQQQPKDAEALARLRTIPKGWERSTAGTAVVEAVNEALAIPKADLPKLPRQSHAPEG
AAAAGEMLKVLLKLIAEKQGVAAKIIANSEDLDKIAAEGEKADVAALKGWRRELFGETAL
KLINGDVALRFVDKKIEAVEISAEITSASA
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaacaacagcagaccttgaggccgcctgccagcagctggccctatcaaattat
attacgatcgataccgaatttcttcgcgagacgactttctggccggagctttgcctgatc
cagatggcgagcccggaccttgccgtcatcgtcgacccgatggcgaagggcatcgatctt
gcgcccttcttcgcgctgatggccaacccggaggtcatcaaggtgttccatgccgcgcgt
caggacatcgagatcatcttccatctcggaaaccttattccgcatccgatcttcgatacg
caggtcgcagcgatggtttgcggctttggcgacagcgtttcctatgaccagctggtcaac
cgcgtcaccggcacgcagatcgacaagtcctcgcgctttaccgactggagccgccgtccg
ctgaccgaaaagcagctcgactatgcgctggccgacgtgacgcatctgcgcgacatctac
aaatacctggcggcagaactcgagcgcgaaggccgttcgctctggctgaccgaagagatg
gccattctcgaagcccgcgacacctacgacctgcaccctgacgacgcctggcagcggctg
aagatgcgggtaaagaagccgatcgaactcgccgcgctgaagacggtcgccgcttggcgc
gagcgcgaggcacgcgcccgcaacgtgccgcgcggccgcatcctcaaggatgacgccatt
tacgagatcgcccagcagcagccgaaggatgcggaagcactggcacggctccggaccatt
cccaagggctgggaacgctccaccgccggaacggcggtcgtcgaggccgtcaacgaggcg
ctggcgatcccgaaggccgatctgccgaagcttccgcgccaaagccatgcgccggaaggt
gctgcggccgctggcgagatgctgaaggtgcttttgaagctgatcgccgagaagcagggt
gtcgccgcgaagatcatcgccaacagcgaagatctcgacaaaatagctgccgagggcgag
aaggcggatgtcgccgcgctcaagggctggcggcgcgaactcttcggcgaaacggcactg
aagctgatcaacggcgacgttgccctgcgcttcgtcgacaagaagatcgaagcagtggaa
atcagcgccgagatcacgtccgcgtcagcttga
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