Ensifer adhaerens Casida A: FA04_05095
Help
Entry
FA04_05095 CDS
T04507
Name
(GenBank) MBL fold metallo-hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
eah
Ensifer adhaerens Casida A
Pathway
eah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FA04_05095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eah03019
]
FA04_05095
Messenger RNA biogenesis [BR:
eah03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FA04_05095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B_2
RNase_J_C
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Regulator_TrmB
Motif
Other DBs
NCBI-ProteinID:
ANK72057
UniProt:
A0ABY8HI65
LinkDB
All DBs
Position
1076771..1078438
Genome browser
AA seq
555 aa
AA seq
DB search
MAQEEELVFLPLGGVGEIGMNLGLYGYGRPGSRQWIMVDCGVTFPGPELPGVDLVLPDIG
FLAEERRNLKAIIITHAHEDHYGGLNDLWPGLNVPVYASPFTAGMLEAKRDFEKSRGEIP
ITIFKQGDRINVGPFEIEAVGVNHSIPEPMSLIIRTPVGTVVHTGDWKIDLHPSLGPLTD
ETRFRQIGDEGVLALVCDSTNAMRDGVSPSEQEVSESLTKIIANAEGRVAITTFSSNVGR
IRSIAEAAEEAGRDVLLLGSSMKRVVAVATDLGLMEGIKPFLAEDEFGYVPRDKVVVILT
GSQGEPRAALAKIARDEMRNVAFSAGDTVVFSSRTIPGNEKAINDIKNGLVEQGIHIITD
SEALVHVSGHPRRTELQQMYQWLRPQILVPVHGEAAHLTAHGELGRQSGIASVPRLRNGE
MLRLAPGPAEVIDEAPHGRIYKDGSLIGDFEEMGIGERRKLSFAGHVAVNVVLDSRYDFM
GDPDIVAIGLPEFDDEGEDMEDTLYDAILGAVESIPRAKRKDLAMLQEAVRRAVRSTANQ
IWGKKPIVTVFVTKV
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaagaagaagaattggtgttcttgccgctcggcggcgtcggcgaaatcggcatg
aatcttggcctgtacggctacggacggccgggcagccgccagtggatcatggtcgattgc
ggtgtgactttcccggggccagagctcccgggggtcgacctcgtgctccccgatatcggc
tttctcgccgaagagcgccgcaatctcaaggcgatcatcatcacccatgcgcacgaggac
cactatggcggtctgaacgacctgtggcccggtctcaatgtgccggtctatgcctcgccg
ttcacggcaggcatgctcgaagccaagcgggacttcgagaagagccggggcgagatcccc
atcacgatcttcaagcagggcgaccgtatcaatgtcggccccttcgagattgaggccgtc
ggcgtcaaccactcgatccccgagccaatgtcgctgatcattcgcacgccggtcggcacc
gtggttcataccggcgactggaagatcgaccttcacccgtcgctcggaccgttgaccgac
gagacacgcttccgccagatcggcgatgaaggtgtgcttgcgctcgtctgcgattccacc
aatgcgatgcgcgacggcgtttcgccgtcggagcaggaggtttccgaaagcctgacgaag
atcatcgccaacgctgagggtcgggtggcgatcacgacgttctcctcgaatgtcgggcgc
atccgctcgatcgccgaagcggcggaagaggccggcagggatgtgcttctgctcggcagt
tcgatgaagcgggtcgtcgccgtcgctacggatcttgggctgatggaaggcatcaaacct
ttcctcgccgaagacgagttcggctacgtgccgcgcgacaaggtcgtggtcatcctgact
ggcagccagggcgagccgcgggcagcccttgccaagatcgcccgtgacgagatgcgaaat
gtcgccttctcggctggcgacacggtcgtgttttcctcacgcacgatcccgggcaacgaa
aaggcgatcaacgacatcaagaacggcctggtggaacagggcatccacatcatcaccgac
agcgaggcgctggtgcacgtatccggccacccgcgtcgcaccgagctgcagcagatgtac
cagtggctacggccgcagatcctcgtacctgttcatggcgaggcggcgcatctgacggcg
catggcgaactgggccggcagtccggcatcgccagcgttccgcgtctcaggaacggcgaa
atgctgcgtcttgcgccaggtcccgccgaagtgatcgacgaagcgccccatggccgcatc
tacaaggacggcagcctcatcggcgatttcgaggagatgggcatcggcgaacgccgcaag
ctctccttcgccggccatgtcgccgtcaacgtggttctcgacagccgctacgatttcatg
ggcgacccggatatcgtcgcgatcggcttgccggagttcgacgacgagggcgaggacatg
gaggacacgctctatgacgccattcttggcgccgtcgagagcattccgcgggcaaagcgc
aaggatctggcaatgctgcaggaggcggtccgccgcgccgtgcgcagcaccgccaaccag
atctggggcaagaagccgatcgtcacggtgtttgtcaccaaagtctga
DBGET
integrated database retrieval system