Ensifer adhaerens Casida A: FA04_05140
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Entry
FA04_05140 CDS
T04507
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
eah
Ensifer adhaerens Casida A
Pathway
eah03030
DNA replication
eah03430
Mismatch repair
eah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FA04_05140
03430 Mismatch repair
FA04_05140
03440 Homologous recombination
FA04_05140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eah03032
]
FA04_05140
03400 DNA repair and recombination proteins [BR:
eah03400
]
FA04_05140
Enzymes [BR:
eah01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FA04_05140
DNA replication proteins [BR:
eah03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FA04_05140
DNA repair and recombination proteins [BR:
eah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FA04_05140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HROB
Motif
Other DBs
NCBI-ProteinID:
ANK72066
LinkDB
All DBs
Position
1086597..1090094
Genome browser
AA seq
1165 aa
AA seq
DB search
MADDSKAASSEALGTDPQFVHLRVHSAFSLLEGALPLKKVIGKAVADNQPAIGIADTNNL
FAALEFSQKAAGDGLQPITGCQLSIDMEDETEGDRRGHGHQLAKLPSIVLIAATDDGYTR
LVDLVSRAYLSGEGSQATRITRSWLGECGTEGLIALTGASGGPVDIAMKAGSTALAEARL
EALHDLFGDRLYIELQRHGGHDRRHESRMIELAYKFDIPLVATNEAFFPSPSDYEAHDAL
MAVAHNAMVSDDSRFRLTPDHYLKSRKEMAALFADLPEALENTIEIARRCSFMLKTRGPI
LPRFTGATADPEEAERAESDELRRQAEEGLEDRLARLGMAPGYTQEEYRERLAFELSVIE
RMKFPGYFLIVADFIKWAKQHDIPVGPGRGSGAGSLVAYALTITDVDPMRFSLLFERFLN
PERVSMPDFDIDFCQDRREEVIRYVQRKYGREQVAQIITFGSLQARAALRDVGRVLEMPY
GQVDKICKLVPNNPANPTPLSKAIEEEPRLQEEAEKEPVVARLLDIAQKIEGLYRHASTH
AAGIVIGDRPLSQLVPMYRDPRSDMPVTQFNMKWVEQAGLVKFDFLGLKTLTVLKVAVDF
VKQRGIEVDLASIPLDDLKTYEMLSRGETVGVFQVESAGMRKALIGMRPDCIEDIIALVA
LYRPGPMENIPVYNARKHGEEEVESIHPKIDHLLKETQGVIVYQEQVMQIAQVLSGYSLG
EADLLRRAMGKKIKEEMDKQRARFVDGAVKNEVSKPQADLIFDLLAKFANYGFNKSHAAA
YAIVSYQTAYMKAHYPVEFLAASMTLDMSNTEKVNDFRQDAKRLGIEVIAPSVQTSFRHF
QTGESRIYYSLAAIKGVGESAVEHIVEVRGDKAFASLEDFCLRIDPKLLNRRVFESLIAA
GAFDCFGYDRAELVGGLDRILGFAQRAQENKTSGQSDMFGAGAATGPERIALPTYTPWLA
SEKLHREFQVLGFYLSAHPLDTYNALLAKMRVQTFGDFAGAVKKGATAGRLAGTVTSKQE
RKTRTGNKMGIIAFSDSSGQFEAVLFSEMLHQYRDLLEPGKSLVMTVAAEERPEGIGLRI
QTLRSLEEESLQLQKALRVYVRDSGPLKSIASHLNTKGDGLVSFVVIKDNGQREIEVELN
EKFRISPEIAAALRSAPGVIDVELV
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgacagcaaggcagcatcgagtgaggcgctcggcacggatccgcagttcgtg
catctgcgcgtccactctgccttctccttgctcgaaggcgctctgccgctgaagaaggtc
atcggcaaggcggtcgccgataaccagccggcgatcgggatcgccgacaccaacaatctc
ttcgcagccctcgaattctcgcagaaggcagccggtgacgggctgcagccgatcaccggc
tgccagctgtcgatcgacatggaggacgagaccgagggggatcggcgcggccatgggcat
cagctcgccaagctgccgtcgatcgtgctcatcgccgccaccgatgacggctatacgcgc
ctcgtcgatctcgtcagccgtgcctatctcagcggcgagggcagccaggcgacgcgcatt
acgcgctcctggcttggcgaatgcggcaccgagggcttgattgcgctgaccggcgcgtcc
ggtggcccggtggatatcgccatgaaggcgggctccacggcgctcgccgaagcgcgtctc
gaagccttgcatgatctctttggcgatcggctctatatcgagctgcagcgccacggtggc
cacgaccggcggcacgagagccggatgatcgagcttgcctacaagttcgacattccgctt
gtcgccaccaacgaagccttcttcccgtcgccctccgactatgaggcgcatgacgccctg
atggcggtagcgcacaacgccatggtgtcggacgacagccggttccgcctgacaccggac
cactatctgaagagccgcaaagaaatggcggcgctgtttgcggatctgcccgaggcactg
gaaaacacgatcgagatcgcccggcgctgctccttcatgctgaagacccgtgggccgatc
ctgccgcgctttaccggcgcgacggcggatccggaggaggccgagcgcgccgagtcggac
gaactgcgtcgccaggcggaggagggcctcgaagaccgtctcgcgagactgggtatggcg
cccggctacacccaagaggaataccgcgagcgcctggccttcgaattgagcgtcatcgag
cgcatgaagttccccggctacttcctgatcgttgccgacttcatcaaatgggccaagcag
cacgacatccccgtcgggccgggtcgcggctcgggcgccggctcgctcgtcgcctatgcg
ctgacgatcaccgacgtcgatccgatgcgcttctcgctgctgttcgaacgcttcctcaat
cccgagcgcgtctcgatgcccgacttcgacatcgacttctgccaggaccggcgcgaagag
gtgatccgctacgtgcagcgcaagtacggtcgcgaacaggtggcgcagatcatcaccttc
ggttcgctgcaggcccgtgccgccttgcgagacgtcggtcgcgtgctcgaaatgccctat
ggtcaggtcgacaagatctgcaagctggtgcccaacaaccccgccaacccgacgccgctt
tccaaggcgatcgaggaggagccgcgcctgcaggaagaggccgagaaggagccggtggtc
gcccgccttctcgatatcgcccagaagatcgaaggcctttaccgccacgcctcgacccac
gccgccggtatcgtgatcggcgaccggccgttgtcgcagctggtgccgatgtatcgcgat
ccgcgctccgacatgccggtcacccagttcaacatgaagtgggtcgagcaggccggtctc
gtcaagttcgacttcctcggcctgaagacgctgacggtgttgaaggtcgcggtcgatttc
gtcaagcagcgcggcatcgaggtcgatctcgcgagcatcccgctcgatgatctgaagacc
tacgagatgctgtcgcgcggcgaaacggtcggcgtgttccaggtggaaagtgccggcatg
cgcaaggcgctgatcggcatgcggcccgactgcatcgaggacatcatcgcactcgtggcg
ctctatcgcccaggcccgatggagaacatcccggtctataacgcccgtaagcatggcgag
gaagaggtcgagtcgatccatccgaagatcgaccacctgctcaaggaaacgcagggcgtt
atcgtttaccaggagcaggtgatgcagatcgcccaggtgctctctggctattcgctcggc
gaggccgaccttctgcgccgcgccatgggtaagaagatcaaggaggagatggacaagcag
cgcgcccgtttcgtcgacggcgccgtcaagaacgaggtgtcgaagccgcaggccgacctc
attttcgacctgctcgccaagttcgccaactacggcttcaacaagtcgcacgcggcagcc
tacgcgatcgtgtcctatcagaccgcctacatgaaggcgcattatccggtggagttcctg
gcggcgtcgatgacgctcgacatgtccaacaccgaaaaggtcaacgacttccgccaggat
gccaagcgtctgggcatcgaggtgatcgccccgtcggtacagacctcgttccggcacttc
cagacgggcgaaagccgcatctattactcgcttgcagcgatcaagggcgtgggcgagtca
gcggtcgagcacatcgtcgaggttcgaggcgacaaggccttcgcaagcctcgaagacttc
tgcctccggatcgaccccaagctgctcaaccgtcgcgtttttgaaagcctgattgccgcc
ggcgccttcgattgcttcggctacgaccgggcggagctggtcggcgggctcgatcgtatt
ctcgggtttgcccagcgggctcaggaaaacaagacgagcgggcagagcgacatgttcggc
gcaggggcggccaccgggccggagcgcattgcgcttccgacctacacgccgtggcttgcc
tcggaaaagctgcaccgtgagttccaggttctgggcttctatctgtctgcccatccgctc
gacacctacaatgcgctgctcgccaagatgcgcgtgcagaccttcggcgatttcgcaggc
gctgtgaagaagggggcgacggccggaaggctcgccggaacagtaacctcgaagcaggag
cgcaagacgcgcaccggcaacaagatgggaatcatcgccttctcggattcctccggccag
ttcgaggcggtactgttctccgagatgctgcaccagtatcgagacctgctcgagcccggc
aagtcgctggtcatgaccgtggcggcggaagagcggccggaaggcatcggcctgcgcatc
cagacgctgcggtcgctcgaagaagaatcgctgcaactgcagaaggcgctgcgcgtctat
gtgcgcgattccgggccgctgaagtcgatcgcctcgcacctcaacacgaagggcgacggg
ctcgtctccttcgtcgtcatcaaggacaatggccagcgcgagatcgaggttgaactgaac
gagaagttccggatttcgccggagatcgctgcagcattgcgctcggcgccgggcgtcatc
gacgtcgaactggtgtaa
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