Ensifer adhaerens Casida A: FA04_05200
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Entry
FA04_05200 CDS
T04507
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
eah
Ensifer adhaerens Casida A
Brite
KEGG Orthology (KO) [BR:
eah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eah03032
]
FA04_05200
03400 DNA repair and recombination proteins [BR:
eah03400
]
FA04_05200
Enzymes [BR:
eah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FA04_05200
DNA replication proteins [BR:
eah03032
]
Prokaryotic type
DNA Topoisomerases
FA04_05200
DNA repair and recombination proteins [BR:
eah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FA04_05200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
ANK72077
LinkDB
All DBs
Position
complement(1101456..1104122)
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AA seq
888 aa
AA seq
DB search
MNVVVVESPSKAKTINKYLGPGYKVLASFGHVRDLPAKDGSVRPDEDFEMSWEVDSASAK
RMKDIADAVKSADGLILATDPDREGEAISWHVLDLLKKKKVLGDKPVKRVAFNAITKKAV
LEAIAHPRDIDTSLVDAYLARRALDYLVGFNLSPVLWRKLPGARSAGRVQSVTLRLVCDR
ENEIERFISEEYWNISALLKTPRGDEFEARLVSADGKRLAPKAVGNGEEANRLKTLLDGA
AYVVDSIEAKPVKRNPSPPFTTSTLQQAASSKLGFSASRTMQVAQKLYEGVDIGGETVGL
ITYMRTDGVQMAPEAIEASRLAIASQFGDRYLPEKPRFYSTKAKNAQEAHEAIRPTDFNR
TPDQVRRFLDGDMLRLYDLVWKRGIASQMASAEIERTTAEITADNGGQKAGLRATGSVIR
FDGFIAAYTDAKEDGEQTDDGDEDGRLPEINARENLAKQKINASQHFTEPPPRYSEASLI
KKMEELGIGRPSTYAATVTTLLDRDYITNDKRKLIPQAKGRLVTAFLESFFTRYVGYDFT
ASLEEKLDQVSAGEVNWKDVLRDFWKDFFAQIEETKELRVTNVLDALNEELAPLVFPKRE
DGGDPRICQVCGTGKLSLKLGKYGAFVGCSNYPECNFTRQLSSDSNGEEAAVSNEPQALG
KDPHTGEEITLRSGRFGPYVQRGDGKEAKRSSLPKGWTPSTIDHEKAVALLSLPRDIGAH
PESGKMISTGLGRYGPFVLHDGTYANLESIEDVFSIGLNRAVSVLADKQSKAGAGRGRTA
AASLKELGDHPDGGPITVRDGRYGPYVNWGKVNATLPKGKDPQSVTVEEALVLISERAAK
GGTAKGKATKAKTTKVAAKSEDGAKATKAKAKAPAKSKTKTAAKAKKD
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttgtagtggtggaatcgccttccaaggcaaagacgatcaacaagtacctgggc
cccggctacaaggtactggcttcgtttggtcacgtgcgcgacctgccggcgaaggacggt
tcggtccgtccggacgaagacttcgagatgtcctgggaagtcgacagtgcctcggcgaaa
cgcatgaaggacatcgccgacgcggtcaaatccgctgacggcctcattctcgcaaccgac
ccggatcgcgaaggtgaagcgatttcctggcacgtacttgaccttctgaagaagaagaag
gtgctcggcgacaagccggtcaagcgcgtggccttcaacgccatcacgaaaaaggccgtt
ctcgaagcgatcgctcatccgcgcgacatcgacacctcgctggtcgacgcttacctggcg
cgccgcgcactcgactatctcgtcggtttcaacctctcgccggtgctctggcgcaagctg
ccgggcgcccgctcggctggccgcgtgcagtcggtgacgctgcgcctcgtctgcgatcgt
gaaaacgagatcgagcgcttcatctccgaggagtactggaacatctcggcgctcttgaag
acgccgcgcggcgacgagttcgaggcgcgtctcgtttcggccgatggcaagcgtcttgcg
ccgaaggctgtcggcaacggcgaagaagcaaatcgtctcaagaccctgctcgatggcgcc
gcctatgtggtcgatagcatcgaagcaaagccggtcaagcgcaacccgtcgccgcccttc
accacctcgacactgcagcaggccgcctcctccaagctcggcttctccgcttcgcgcacc
atgcaggtcgcgcagaagctctatgaaggcgtcgacatcggcggcgagacggtcggtttg
atcacctatatgcgtaccgacggcgtgcagatggcgccggaagcgatcgaagcctcgcgc
cttgcgatcgccagccagttcggcgaccgctatctaccggaaaagccgcgcttctattcg
accaaggcgaagaatgcccaggaagcgcacgaggccatccgcccgaccgatttcaaccgg
acgccggaccaggttcgccgtttcctcgatggcgacatgctcaggctatacgacctcgtc
tggaagcgcggcatcgccagccagatggcatcggccgagatcgagcgtacgaccgcggaa
atcactgcggacaatggcggccagaaggccggtctgcgcgccaccggctcggttatccgc
ttcgacggcttcatcgctgcctatacggatgccaaggaagacggcgaacagactgatgac
ggcgacgaggatggccgcctgccggagatcaatgcgcgcgaaaacctcgccaagcagaag
atcaatgcctcgcagcatttcactgagccgccgccgcgctattccgaagcaagcctgatc
aagaagatggaagagctcggcatcggccgtccctccacctatgccgccaccgtcacgacc
ctgctcgatcgcgactacatcaccaacgacaagcgcaagctcatcccccaggccaaggga
cggctggtgacggcgttcctggaaagcttcttcacacgctatgtcggttacgacttcacc
gcgtcgctcgaagaaaagctcgaccaggtctccgccggcgaggtcaactggaaagacgtg
cttcgcgacttctggaaggatttcttcgcccagatcgaggaaaccaaggaactgcgcgtc
acgaacgtgctcgacgcgctgaacgaggaactggcgccgctggtcttccccaagcgcgag
gacggcggcgatccgcgcatctgccaggtctgcggcaccggcaagctgtcgctgaagctc
ggcaagtacggcgccttcgtcggttgctcgaactatccggagtgcaacttcacccgccag
ctttcctccgacagcaacggcgaggaggcggcggtctcgaacgaaccgcaggcgctcggc
aaggatccgcataccggcgaggaaatcacgctcaggagcggccgcttcggcccctatgtc
cagcgtggcgacggcaaggaagccaagcgctcgagcctgccgaagggctggacgccgtcg
acgatcgaccatgagaaggcggtagcgctgctgtcgctgccgcgcgatatcggtgcccat
ccggaatccggcaagatgatctcaaccgggcttggccgctacggaccgttcgtgctgcac
gacggcacttatgccaacctcgaatcgatcgaggacgtcttctcgatcggcctcaatcgc
gccgtctcggttctcgccgacaaacagtcgaaggccggtgccggccggggccgcaccgct
gccgcgtcgctcaaggaactcggtgaccatcccgacggtggcccgatcaccgttcgtgac
ggtcgctacggcccctacgtcaactggggcaaggtcaacgccaccctgccgaagggcaag
gatccgcagtcggtgacggtcgaggaggcacttgtgctgatctcggagcgtgctgccaag
ggcggaacggccaaggggaaggcaaccaaggccaagacgaccaaggtagcggcgaagtcc
gaggacggcgccaaggcgaccaaggctaaggccaaggcgcccgccaagagcaaaacaaag
acggccgccaaggccaagaaggactga
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