Ensifer adhaerens Casida A: FA04_11810
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Entry
FA04_11810 CDS
T04507
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
eah
Ensifer adhaerens Casida A
Pathway
eah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FA04_11810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eah03019
]
FA04_11810
03400 DNA repair and recombination proteins [BR:
eah03400
]
FA04_11810
Enzymes [BR:
eah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FA04_11810
Messenger RNA biogenesis [BR:
eah03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FA04_11810
DNA repair and recombination proteins [BR:
eah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FA04_11810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
HHH
ResIII
Motif
Other DBs
NCBI-ProteinID:
ANK73244
LinkDB
All DBs
Position
complement(2440832..2442709)
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AA seq
625 aa
AA seq
DB search
MEFVERATPSRSAASKLFDEAGQAPLDVLKRVYGYSAFRGKQQAVVEHVTAGGDAVVLFP
TGAGKSLCFQIPALCRPGLGVVVSPLIALMRDQVEALKQLGVNAAALNSSLTREEAIAVR
RQIHDGTLDLLYVTPERTVTDGFADLIGNARIALFAIDEAHCVSQWGHDFRPEYRALGLL
AERYPGVPRIALTATADPHTRDDIVERLALSNAEVFTTSFDRPNIAYEIVERDQPRQQLL
RFLSRFKGASGIVYCLSRAKVEDTAEWLNAQGIRALPYHAGMDRALRDRHQDAFLKEESL
CLVATVAFGMGIDKPDVRYVAHLDLPGSVEAYYQETGRAGRDGQPSEVWMAYGMADVLQR
RRMIDEGGAADDIKRIERGKLNALLAICETAGCRRQAILAHFGEAHPGRCGHCDTCLKPV
ETWDGTEAAIKALAAVYRTGERFGTGHVVDVLMGTVNEKTERFGHVDMPVFGAGKDLPAR
TWQSVFRQLLAAGLISVDHAAFGAMKLEAEARAVFKRERQVFFRKDRPTSGKAARGAKSG
SQRERADLAGSDLELFELLRAERFSIAKDLNVPPYVVFPDATLIALAKERPRDLDELLDI
PGIGESKRERYGEAFLAVIDGYLDG
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgtcgaaagggcgacgccctcaagaagcgctgccagcaagctcttcgacgaa
gccggccaggcaccgctcgacgtgctgaaacgcgtctatggctattctgcctttcgcggc
aagcagcaggcagtggtcgagcatgtgaccgctggcggcgatgccgtcgttctctttccg
actggcgccggcaagtcgctctgcttccagatcccggcgctctgccggcccggattgggt
gtcgtcgtctcgccgctgatcgcgctgatgcgcgatcaggtggaggcgctgaaacagctt
ggcgtcaatgcggctgcgctgaattcgtcgctgacgcgcgaagaggcgattgcggtcagg
cgccagatccacgacggcacgctcgaccttctctatgtgacgccggagcggaccgtcacc
gacggcttcgccgatctcataggcaatgcccgaatcgcgctttttgccatcgacgaggcg
cactgcgtttcgcaatggggccatgatttccgccccgagtaccgcgcgctcggattacta
gccgagcgctatcccggcgtgccgcgcatcgcgctcactgccaccgccgatccgcacacc
cgcgacgacatcgtcgagcggctggcgctcagcaatgccgaggtgtttaccaccagcttc
gaccggccgaacatcgcctatgaaatcgtcgagcgtgaccagccgcgccagcaactgctg
cgctttctctcccgcttcaaaggggcgtccggcatcgtctattgcctgtcgcgcgccaag
gtcgaggacacggccgaatggctgaacgcgcaaggcatccgggcgctaccctatcatgcc
ggcatggaccgcgcgctccgcgacaggcatcaggacgccttcctgaaagaagagagcctc
tgcctcgttgcgaccgtcgccttcggcatgggcatcgacaagcccgacgtgcgttatgtc
gcgcatctcgacctgccgggatcggtggaggcctattaccaggagaccggccgcgccggt
cgtgacgggcagccctctgaggtctggatggcctatggcatggccgatgtgctgcagcgc
cgccggatgatcgacgagggtggagcggcggatgacatcaagcgcatcgagcgcggcaag
ctcaatgcgctcttggcgatctgcgagacggccggctgccgccgccaggcgatccttgcg
catttcggcgaggcccatcccggccgttgcggccattgcgacacctgcctgaagccggtc
gagacctgggacgggacggaagcggcgatcaaggcgctggccgcggtctatcgcaccggc
gagcgcttcggcaccggccacgtggtcgatgtgctcatgggcacggtcaacgagaagacc
gagcgcttcggccatgtcgacatgcccgtcttcggcgccggcaaggacctgccggctcgc
acctggcaatcggtcttccggcaattgctggcggcgggcctgatcagcgtcgaccatgcc
gccttcggcgcgatgaagctcgaggcggaggcgcgtgcggtgttcaagcgcgagcgccag
gtgtttttccgcaaggaccgcccgacctcgggcaaggcggcgcgcggcgccaagtcggga
tcgcagcgcgaacgggccgatctggccgggtccgatctcgaacttttcgaactgctgcgc
gccgagcgcttctcgatcgccaaggatctgaacgtcccgccctatgtcgtcttccccgat
gcgaccttgattgcgcttgccaaggaacgcccgcgtgacctcgatgaactgctcgacatt
cccggtatcggcgaaagcaaacgcgaacgctacggcgaggcatttctggcggtcatcgac
gggtatctcgacgggtga
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