Ensifer adhaerens Casida A: FA04_18075
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Entry
FA04_18075 CDS
T04507
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
eah
Ensifer adhaerens Casida A
Brite
KEGG Orthology (KO) [BR:
eah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eah03019
]
FA04_18075
Enzymes [BR:
eah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
FA04_18075
Messenger RNA biogenesis [BR:
eah03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FA04_18075
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
WHD_HA2
CON_HrpB
AAA_30
AAA_16
AAA_19
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ANK74356
UniProt:
A0ABY8HEG0
LinkDB
All DBs
Position
complement(3743685..3746144)
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AA seq
819 aa
AA seq
DB search
MTTQLPALPVRDVLPALAHALTAGPSVVLSAPPGAGKTTLVPLFLLDQDWAKGGKIILLE
PRRLAARAAAGRMAELLGEKVGETVGYRMRLDNRVSGKTRIEVVTEGVFARMILDDPELK
GVAAVLFDEFHERSLDADFGLALALDVQAALRDDLKIIVMSATLDVERVSGLLGDAPVIE
SQGRSYPIDIRYQDRGGDSVEDTMLRAIAEAHRTEDGSILAFLPGQAEITRVATRLQDRF
DNNTAIVPLYGNLTQKEQDAAIRPAPSGTRKIVLATSIAETSITIDGVRIVIDSGQQRVP
VFEAATGITRLETVRVSRASADQRAGRAGRTEPGIAIRLWHSGQTAALAAFTPPQILASD
LSGLLLDCAHWGVSDPATLAFIDAPPETTLAEARKLLTSLGALDEAGALTPTGRKIRDLA
LPPRLAAMAVAAAEEGQAETACLLAVMLTEQGLGGNSVDLEDRVRRFRQERGDRADASRN
LARRMAAELKGAPKSSEPIQPGALLMHAFPDRIALQRGGRGRFVMANGRGAEIPETERLA
AASMLVIADLTGRAGGQRVLAAAELTRAEVEAHMPEAITREDQSFFDKASRQVRARRVTR
LGAIIFEEAPLTRPTGESAARALADGVRQLGLAILPFSKEAMQMRDRIGFLNRSIGEPWP
DVSDEALLDRLDDWFVPFQHGITAIADIKASNLSDGLLSLIPHERQRELGRLAPTHFEAP
TGQRHPIHYDGDEPLLSIRVQELFGLKTHPAIGDGRLPLLLELISPGHRPIQTTRDLPGF
WAGSWRDVRADMRGRYPKHPWPEDPANAAPTTRAKPRGT
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
gtgacgacacagcttcctgcgcttccggttcgcgacgtgctgcccgcactggcacatgcg
ctcaccgcaggcccctccgtggtgctttccgccccacccggcgccggcaagacgacgctt
gttccgctcttcctgctcgatcaggactgggcaaagggcggaaagatcattctgctcgag
ccgcgccggctggcagcgcgcgccgcagctggccgcatggccgagctcctgggggaaaag
gtcggcgaaaccgtcggctatcgcatgcgtctcgacaatcgcgtctccggcaagacacgc
atcgaagtggtgaccgagggtgtgtttgcccgcatgatcctcgacgacccggaactcaag
ggcgtcgcagccgtgctgttcgacgaattccacgagcgctcgctcgacgcggatttcggc
ctggcgctggcactcgacgtgcaggcggcgctgcgtgacgacctgaagatcatcgttatg
tcggcaacgctcgatgtcgagcgggtctcgggcctgcttggcgatgcgccggtcatcgag
agccaggggcgcagctatccgatcgacatccgctaccaggatcgcggcggcgacagcgtc
gaggacacgatgctgcgggccattgccgaagcgcatcgtacggaagatggctccatcctc
gcctttctgcccggccaggccgaaatcacccgagtcgccacgcggctccaggaccgcttc
gacaacaatacggcgatcgtaccgctttatggcaacctgacccagaaggaacaggatgca
gcgatccggccggcgccatcaggcacccgcaagatcgtgcttgccacctcgatcgccgaa
acctcgatcaccatcgacggcgtacgcatcgtcatcgacagcggccagcagcgcgttccg
gtgttcgaggcagcgaccgggatcacgcggctggagacggtgcgcgtgtcgcgcgcgtct
gccgatcagcgcgccggccgtgcggggcgaaccgaacccggcattgccatccgtctctgg
catagcggccagaccgcagcgcttgccgccttcacgccgccgcagattctggccagcgat
ctctcgggcctgctgctcgactgcgcccattggggtgtcagcgatccggccacccttgcc
ttcatcgacgcgccgccggagacgacactcgccgaagcgaggaaactgctgaccagcctt
ggcgcgctggacgaggccggcgcgctgaccccgacgggccgcaagatccgcgacctggcc
ttgccgccgcggctggcggcaatggcggttgccgcggccgaagagggacaggcggaaacc
gcgtgtctcttggcggtgatgctgaccgaacagggcttgggcggtaacagcgtcgatctc
gaggaccgggtgcgccgcttccgtcaggagcgtggcgaccgcgccgacgcctcgcgcaat
ctggcgcggcgcatggcggccgagctgaagggcgcgccgaaatcgagcgaaccgatccag
ccgggtgccctgctgatgcacgcctttcccgaccgcatcgcgctgcagcgcggtggccgc
ggccggttcgtcatggcgaacggacggggcgccgagatccccgagacggagcggctggcg
gcggcttccatgctcgtcatcgccgacctgaccggccgcgccggcggccagcgcgtgctg
gcggcggcagaactgacgcgcgccgaggtcgaggcgcatatgcccgaggcgataacccgc
gaggaccagagctttttcgacaaggccagccggcaggtgcgggcgcgtcgggtcacgcgg
ctcggcgccatcatcttcgaggaggcgccgctcacacgaccgaccggtgaatcggcggcg
cgggcactcgccgacggcgtacgccagctcggccttgccatcctgcccttctccaaggag
gcgatgcagatgcgcgaccgcatcggcttcctcaaccgctcgatcggtgaaccctggccg
gatgtttccgacgaagcgctgctcgaccgtctcgacgactggttcgttcccttccagcac
ggcatcaccgcgattgccgacatcaaggcatccaacctctccgacggtctgctctccctc
attccacacgagcggcaacgggaactcgggcggctggcgccgacgcatttcgaggcgccg
accgggcaacggcacccgatccactacgacggcgacgagccgctgctgtcgatccgggta
caggagctgtttggcctgaagacccatccggcgatcggcgatgggcggctgccgttgctg
ctcgagctgatctcgcccggacatcggccgatccagacgacgcgcgacctgcccggtttc
tgggcgggttcctggcgcgatgtgcgcgccgacatgcgcgggcgctatccgaagcatccc
tggcccgaggatccggccaatgcggcgccgacgacacgggcgaagccccgtggtacatga
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