Ensifer adhaerens Casida A: FA04_18760
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Entry
FA04_18760 CDS
T04507
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
eah
Ensifer adhaerens Casida A
Pathway
eah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FA04_18760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eah03019
]
FA04_18760
03016 Transfer RNA biogenesis [BR:
eah03016
]
FA04_18760
Enzymes [BR:
eah01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FA04_18760
Messenger RNA biogenesis [BR:
eah03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FA04_18760
Transfer RNA biogenesis [BR:
eah03016
]
Prokaryotic type
tRNA degradation factors
FA04_18760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
ANK74470
UniProt:
A0A9Q9D9R3
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All DBs
Position
3884925..3887078
Genome browser
AA seq
717 aa
AA seq
DB search
MFDTHKVEIEWAGRPLKLETGKIARQADGAVLATYGETVVLATVVSAKSPKPGQDFFPLT
VNYQEKTYAAGKIPGGYFKREGRPSENETLVSRLIDRPIRPLFPDGYKNDTQVIVTVMQH
DLENNPDVLSMVAASAALTLSGIPFMGPIGGARVGYINGQYVLNPHLDEMDESTLDLVVA
GTQEAVLMVESEAKELPEDVMLGAVVFGQKGFQPVIDAIIKLAEVAAKEPREFEAEDHSA
LENAMLSLAEDELRNAYKITEKAARYAAVDAVKAKVKAHFLPEGIENPAHSAEEIGAVFK
HLQAKIVRWNILDTKSRIDGRDLETVRPIVSEVGVLPRTHGSALFTRGETQAIVVATLGT
GEDEQYVDSLTGMYKERFMLHYNFPPFSVGETGRMGSPGRREIGHGKLAWRAIRPMLPEA
EQFPYTLRVVSEITESNGSSSMATVCGTSLALMDAGVPLAKPVAGIAMGLIKEDERFAVL
SDILGDEDHLGDMDFKVAGTDAGITSLQMDIKIEGITEEIMGIALNQAKGGRLHILGEMA
KAISESRGQLGEFAPRIEVMNIPVDKIREVIGSGGKVIREIVEKTGAKINIEDDGTVKIA
SSSGKEIEAARKWIHSIVAEPEVGQVYEGTVVKTADFGAFVNFFGARDGLVHISQLASER
VAKTTDVVKEGDKVWVKLMGFDERGKVRLSMKVVDQATGKEIVAEKSEKKGDGEAAE
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatacccacaaggttgaaatcgaatgggctgggcgtccgctcaagctcgaaacc
ggcaagatcgcccgtcaggctgacggcgccgttctcgccacctacggcgaaaccgtcgtt
ctcgccaccgtcgtttcggccaagtcgccgaagccgggccaggacttcttcccgctgacc
gtcaactaccaggaaaagacctacgccgccggcaagatcccgggtggctacttcaagcgc
gaaggtcgtccgagcgaaaacgaaacgctcgtctcgcgcctgatcgaccgtccgatccgt
ccgctcttccccgatggctacaagaacgacacccaggtcatcgtcacggtcatgcagcat
gacctcgaaaacaaccccgacgtcctgtcgatggtcgccgcttctgcagcgctgacgctg
tcgggcatccccttcatgggcccgatcggtggcgcgcgcgtcggctacatcaacggccag
tacgttctgaacccgcatctcgacgagatggacgaatcgaccctcgacctcgtcgtcgcc
ggcacccaggaagcggtgctgatggtcgaatctgaagccaaggaactgccggaagacgtc
atgctcggcgccgtcgtcttcggtcagaagggcttccagccggtcatcgacgccatcatc
aagctcgctgaagtcgctgccaaggagccgcgcgaattcgaagccgaagatcattccgct
ctcgaaaacgccatgctctcgcttgccgaagacgagctgcgcaacgcctacaagatcacc
gagaaggctgcccgttacgctgccgtcgacgccgtcaaggccaaggtgaaggcacacttc
ctgcctgagggcatcgagaacccagcccattcggccgaagaaatcggcgccgtcttcaag
cacctgcaggccaagatcgttcgctggaacatcctcgacaccaagagccgcatcgacggc
cgcgatctggaaaccgttcgcccgatcgtgtcggaagtcggcgttctgccgcgcacccac
ggttcggcgctgttcacccgcggcgaaacgcaggcgatcgtcgttgccacgctcggcacc
ggcgaagacgaacagtacgtcgacagcctgaccggcatgtacaaagaacgcttcatgctg
cactacaacttcccgcccttctcggtcggcgaaaccggccgcatgggctccccgggccgc
cgcgaaatcggtcacggcaagctcgcctggcgcgctatccgcccgatgctcccggaagcc
gagcagttcccctatacgctgcgcgtcgtttccgagatcaccgagtccaacggctcgtcc
tcgatggccaccgtctgcggcacctcgctcgctctcatggacgccggcgttccgctcgca
aagccggttgccggtatcgccatgggcctgatcaaggaagatgagcgcttcgccgttctc
tccgacattctcggcgacgaagaccacctcggcgacatggacttcaaggttgccggtacc
gacgccggcatcacctcgctccagatggacatcaagatcgagggcatcaccgaagagatc
atgggcatcgcgctcaaccaggccaagggcggccgtctccacatcctcggcgaaatggcc
aaggccatttccgaaagccgtggccagctcggcgagttcgccccgcgcatcgaagtcatg
aacattccggtcgacaagatccgcgaagtcatcggttcgggtggcaaggtcatccgcgaa
atcgtcgaaaagaccggcgccaagatcaacatcgaagacgatggcaccgtgaagatcgcc
tcctcgtccggcaaggaaatcgaagcggcccgcaagtggatccactcgatcgttgccgaa
ccggaagtcggccaggtctacgaaggtaccgttgtgaagaccgccgacttcggcgccttc
gtcaacttcttcggtgcccgtgacggtctcgtccacatctcgcagctcgcctccgagcgc
gtcgccaagacgaccgacgtcgtcaaggaaggcgacaaggtctgggtcaagctcatgggc
ttcgacgagcgcggcaaggttcgcctgtcgatgaaggtcgtcgaccaagccaccggcaag
gaaatcgttgccgaaaagtctgaaaagaagggcgacggcgaagccgctgaataa
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