Ensifer adhaerens Casida A: FA04_20390
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Entry
FA04_20390 CDS
T04507
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
eah
Ensifer adhaerens Casida A
Pathway
eah03420
Nucleotide excision repair
eah03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FA04_20390
03430 Mismatch repair
FA04_20390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eah03400
]
FA04_20390
Enzymes [BR:
eah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FA04_20390
DNA repair and recombination proteins [BR:
eah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FA04_20390
MMR (mismatch excision repair)
Other MMR factors
FA04_20390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_11
HHH_5
HHH
AAA_12
Motif
Other DBs
NCBI-ProteinID:
ANK75103
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All DBs
Position
pCasidaAA:complement(144047..146116)
Genome browser
AA seq
689 aa
AA seq
DB search
MSAAYLEKLNDRQREAVEHGIGLPEGQVGGPLLIIAGAGSGKTNTLAHRVAHLIVNGADP
RRILLMTFSRRAAAEMTRRVARICRQVLGDNAAVMTDALSWAGTFHGIGARILRIYAEQI
GLGPDFTIHDREDSADLMNLVRHELGFSKTESRFPTKGTCLSIYSRVVNSESSIGDVLKS
AYPWVTGWDEQLKALFAAYVDAKQAQNVLDYDDLLLYWAQMVSDPELAEDIGGRFDHVLV
DEYQDTNRLQASILMSLRPGGHGLTVVGDDAQSIYSFRAATVRNILDFPNAFSPEPADVI
TLDRNYRSTQPILAAANGVIGLARERFTKNLWTDRQSEQRPLLVAVKDEADQAAYIVEQV
LAGREIGIALKQQAVLFRSSNHSGTLEVELTRRNIPFVKFGGLKFLDSAHVKDLLAVLRF
AQNPRDRVAGFRLLQMLPGIGPQTAGKILDAIAADPEPLAALAEIPPPAKTGENWTGFVD
LVSGLRRAEPGWPQEIGAARAWYEPHLDRIHEDADTRKADLLQLEQIAGGYQNRERFLTE
LTLDPPDATSDQAGVPLLDEDYLILSTIHSAKGQEWRSVFMLNVVDGCIPSDLGVGTTAE
LEEERRLLYVGMTRARDHLSLVTPQRFFTHGQNAQGDRHVYASRTRFIPATLLQFFETTS
WPKISASASERSAKQIRIDVGARMRSMWK
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgcctatctcgaaaaactcaatgaccgccagcgtgaggcggtcgagcacggt
atcggcttgccggaaggacaggtcggcggcccgcttctcatcatcgccggtgccggctcc
ggcaagacgaatacgctcgcccaccgcgtcgcgcatctcatcgtcaacggtgccgatccg
cgccgcattctgctgatgaccttttctcgacgcgcagcagccgagatgacccgccgggtc
gcgcgcatctgccgccaggtccttggcgacaacgctgcagtcatgacggacgcgctctcc
tgggccggcaccttccatggcatcggcgcccggatcctgcgcatctacgccgaacaaatc
ggtctcggcccggattttacgatccacgaccgggaggacagcgccgatttgatgaacctc
gtgcgccacgagctcggcttctcgaagacggaaagccgcttcccgacaaagggaacgtgc
ctttcgatctattcgcgcgtcgtgaactctgaaagctcgattggcgacgtattgaagtcg
gcctatccctgggtcaccggctgggacgaacagctcaaggcgctgtttgcggcttacgtc
gatgccaaacaggcgcagaacgtgctcgattatgacgatctcctgctctactgggcgcag
atggtttccgatccggagcttgccgaagatatcggcggacgcttcgatcatgttcttgtc
gacgagtatcaggacaccaacaggctgcaggcgtcgatcctgatgtcgctcagaccgggc
ggccacggattgacggtcgttggcgacgacgcccagtcgatctattctttcagggctgcg
acggttcgcaatattctcgatttcccgaacgccttttcgcccgagcctgccgacgtcatc
accctcgaccggaactaccgctcgacgcagccgatcctcgccgctgcgaacggcgtgatc
ggcctggcgcgggagcgatttaccaagaacctctggacggacaggcaatcggagcagcgc
ccgttgctcgtcgccgtcaaggacgaagcggatcaggccgcctacatcgtggagcaggtt
ctcgctggccgcgagatcggtatcgccttgaagcagcaggcggtgctttttcgctcgtcc
aatcacagcggaacgctcgaagtcgaactcacccgccgcaacattccgttcgtgaaattc
ggtggcctgaagtttctcgacagcgcccatgtgaaggacctgctcgcagtcctgcgcttc
gcgcagaacccgcgtgatcgcgtcgcaggtttccggttgctgcagatgctgcccggtatt
ggcccacagaccgctggaaagatcctcgatgcgatcgccgccgatccggaaccactcgcg
gctcttgctgagatcccgcctcccgccaagaccggcgagaactggaccggcttcgtcgac
ctggtgtccggtctgcgacgggccgagcctggatggccgcaggagattggcgctgcgcgc
gcctggtatgagccccatcttgaccggatccatgaagacgccgacacgcgcaaggccgac
ctgctgcagctcgagcagattgccggcggctaccagaaccgcgaacgtttcctgaccgag
ctgacccttgacccgcccgatgccacgagcgaccaggcgggcgtgccgctgctcgacgag
gactatctgatcctgtcgaccatccattcggcgaagggccaggaatggcgctcggtcttc
atgctcaacgtcgtcgacggctgcattccgtccgatctcggcgtgggtacaactgccgaa
ctcgaagaggagcggcggctgctctatgtcggcatgacacgggcacgcgatcatctctcc
ctggtgacgccgcagcgcttcttcacccacggccagaacgcccagggcgaccggcatgtc
tacgcctcgcgaacccgcttcatcccggcgacattgcttcagtttttcgagacgacgagc
tggccgaagatctcggcaagcgccagcgagcgaagcgccaagcagatccgcatcgacgtc
ggcgcccgcatgcgctccatgtggaagtga
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