Ensifer adhaerens Casida A: FA04_24710
Help
Entry
FA04_24710 CDS
T04507
Name
(GenBank) Ti-type conjugative transfer relaxase TraA
Organism
eah
Ensifer adhaerens Casida A
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MobA_MobL
AAA_30
Bep_C_terminal
AAA_19
Viral_helicase1
AAA_11
UvrD_C_2
TraI_hel_assoc_N
AAA_22
PIF1
RsgA_GTPase
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ANK75862
LinkDB
All DBs
Position
pCasidaAA:complement(1105261..1109883)
Genome browser
AA seq
1540 aa
AA seq
DB search
MAIMFVRAQVISRGGGRSIVSAAAYRHRARMTDEQAGTSFSYRGGASELVHEELALPDQI
PLWLKRTVDDKTVAEASEVFWNAVDALEARSDAQLARELIIALPEELTRAGNIALVREFV
RDNLTSKGMVTDWVYHDKDGNPHIHLMTALRPLTEEGFGPKKVPVLGDDGKPLRVVTPNR
PNGKIVYKLWAGDKETMKAWKVAWAETVNRHLALAGHEIRLDGRSYAEQGLDGIAQKHLG
PEKAALARKGVEMYFAPADLARRQAMADRLLADPALLLKQLGNERSTFDEREIAKTLHRY
VDDPVDFANIRARLMASDDLVLLKAQQIDTQTGKVTEPAVFTTRGILRIEYDMAQSAEVL
SMRKGFGVSGAKAAAAVRSVETADPKKSFRLDAEQVDAVRHVTRDNAIAAVVGLAGAGKS
TLLSAARVAWESDGRRVIGAALAGKAAEGLEDSSGIRSRTLASWELAWAGGRETMERGDV
LVIDEAGMVSSQQMARILRAVEDAGAKAVLVGDAMQLQPIQAGAAFRAITERIGFAELAG
VRRQRDVWARDASRLLARGKVEEGLDAYAQRGCIVETETRAEVIDRIVADWADARRDLLQ
KFAVGRRPGRLRGDELLVLTHTNDDVRKLNEALRKVMIDEGALTDARQFRTARGLREFGA
GDRIIFLENARFLEPRAKRLAPQYVKNGMLGTVVSSGDKRADALLTVHLDNGRDVVISED
SYSNVDHGYAATIHKCQGSTIDRTFVLATGMMDQHLTYVAMTRHRNRADLYVARENFEPK
PQWGRSARVDHAAGVTGELVETGSAKFRPQDENAKHSPYADVRTDDGTIHRLWGVSLPKA
LEEGGISTGDTVRLRKDGVETVTVRVPVTDEKTGKKRLEERQVERNVWTATQIETVDARK
ARIERESRRPLVFKQLVERLGRSGAKTTTLDFESKEGYREHVLDFAQRRGIDTLARAAAE
LEEGAARRVAWLAEKRSRLAKLWERASIALDFAIDRERSVSYSEERRVSLVAGIPVGGNY
LIPPATEFAHSVEEDARQAQLASQPWKEREEILRPVLQKIYRDPSGALSALNALVAGADV
EPRKIAEDLGLAPERLGRLRGSDRLVDGRAARNERNEAVATLSELLTLARAQATEFRRQA
ERFASREQQRRVHMALSIPALSKKAMARLVEVEAVRERGGVDAYKTAFAYAAEDRLLVQE
VKAVNEAVTSRFGWSAFTARADPIAERNVEERMPENLATEHRQKLVPLFEVIRRFSDEQH
LAEKQDRSKIVAGASIEFGNEVVPVLPMLAAVTEFKTPVADEARERALAVPHYNHHRAAL
MDAATRIWRDPAGAIAKIEELVEKGFAGERIAAAITNDPAAYGALRGSGRIVDKLLAAGR
ERKAALQAVSEAASCVRSLGASYAAAFEAETKAIAAERRHMAVAIPGLSRKAENALRQLV
AEKKREGKLEAAMGLLDQRVAQEFTAVSRALDERFGRNAVLRGEEDVINRVSPAQRSAFE
AMRDRLQVLQQTVRLQRSQETVSERQRRVIEPVRGITAEH
NT seq
4623 nt
NT seq
+upstream
nt +downstream
nt
gtggcgatcatgttcgtcagagcgcaggtgatcagcaggggaggggggcgcagcatcgtc
tcggccgccgcctaccgccaccgcgcccggatgacggacgagcaggccgggacgtccttc
agctaccgtggcggcgcgtcggagctggtgcatgaggagctggcgctgccggaccagata
cctctctggctgaagagaacagtcgacgacaagaccgtcgcggaggccagcgaggtgttc
tggaatgcggtcgatgcgttggaggcgcggtcggacgcgcagcttgcgcgggaattgatc
atcgcgctgcccgaggagctgacacgggcggggaatatcgcgctggtgcgcgagttcgtc
cgagacaatttgacgtcgaagggcatggtcacagactgggtctatcacgataaggacggc
aatccgcatatccacctgatgacggcgctcaggcctctgacggaggaggggtttgggccg
aagaaggtgccagtcctgggcgacgacggaaagccgttgcgtgtcgttacaccgaaccgg
ccgaacggcaaaatcgtctacaagctctgggccggcgacaaggaaaccatgaaggcatgg
aaggtcgcatgggcggaaacggtcaaccgccacctggcgctggccggccatgagatccgt
ctcgatggccgctcctatgctgagcaaggcctcgatgggatcgcccagaaacacctcggc
ccggagaaggcggcgctcgcgcgcaagggtgtcgagatgtatttcgcgcccgccgatcta
gcgcggcggcaggcgatggccgaccggctactcgcggatcctgcgcttctcctcaagcag
ctcggcaacgaacgttccacctttgacgagcgcgaaatcgccaagacgctgcaccgctat
gtcgatgatccagtggacttcgccaatatccgcgcgcggctcatggcttcggacgacctc
gtgctgctgaaggcgcagcagatcgacacccaaacgggcaaggtgacagagccggcggtg
ttcacaacgcgggggatcctgcgcatcgaatatgacatggcgcagtcagccgaggttctg
tcgatgcgaaagggcttcggcgtctccggtgccaaggccgccgccgccgtccgaagcgtc
gaaacggccgatcccaaaaaatccttcaggctcgatgcggaacaggtcgatgcggtacgt
catgtcacgcgcgataatgccattgcggcggtcgtggggcttgccggcgccggtaagtcg
acactgctttcggcggcccgcgtcgcatgggaaagcgacggccgacgggtgatcggcgcg
gccctagccggcaaggccgcggaagggctggaggacagttccgggatccggtcgcgcacg
ctggcgtcctgggagcttgcctgggccggggggcgcgaaacaatggagcgcggcgatgtg
ctcgtcatcgatgaggccggcatggtgtcatcgcagcagatggcgcgtatcctcagggct
gtggaggacgcaggcgcaaaagccgtgctggtcggcgacgcgatgcaactgcagccgatc
caggcgggtgcggcgttccgggcaatcaccgaacggatcggcttcgcggaacttgccggc
gtgcggcggcagcgtgatgtctgggcgcgcgatgcttcccgtctcctggcgcgcggcaag
gtcgaagagggccttgatgcctacgcgcagaggggctgcattgtcgagaccgaaaccagg
gccgaggtcatagaccgcatcgttgccgattgggccgacgcccgccgggacctgcttcag
aaatttgccgtgggccggcgtccgggacgtcttcgcggcgacgaactgcttgtgcttact
cacaccaacgatgacgttcgtaagctaaacgaggccttgcgcaaggtcatgatcgacgag
ggcgcgcttacagatgcgcgccaattccggacggcacgtgggcttcgtgagtttggcgcg
ggcgaccggatcatcttcctcgaaaacgcccgcttccttgaaccacgagcaaagcggctt
gctccccaatatgtcaagaacggcatgcttggcacggttgtttcatccggcgacaaacgc
gcagacgcgctgttgacggtacatctcgacaatggccgggacgtcgtgatcagtgaggat
agctacagcaatgtcgatcacggctacgccgcgaccatccacaaatgtcaaggctcgacc
atcgaccgaaccttcgtgctcgccaccgggatgatggaccagcatctgacctatgtggcg
atgaccaggcatcgtaatcgcgccgatctctacgtggcgcgcgagaactttgaaccgaag
ccgcaatgggggcgtagcgcacgtgtcgatcatgcagccggcgtcaccggtgaattggtg
gagaccgggtcggccaagttccggccgcaagatgaaaacgccaaacacagcccctacgcc
gatgtgaggacggacgacggtaccattcatcgactttggggcgtgagcctgccaaaggca
cttgaggagggtggaatctcgacaggcgatactgtgaggctccgcaaggatggcgtcgaa
acggtcacggtaagggtgcccgtcactgatgaaaagaccggcaagaagcgtcttgaggaa
cgtcaggtcgaacgcaacgtctggactgcaacccaaatcgaaactgtcgatgcgcgcaag
gcgaggatcgaacgggaaagccggcggccgcttgtgttcaaacagcttgttgagcgcctc
ggacgatccggcgccaagacaacgacgctcgatttcgaaagcaaggaaggctatcgggag
catgtgcttgattttgcccagcggcgtggcatcgacacgctcgcccgggccgctgcggaa
ttggaggagggcgcggcgcggcgggtggcgtggcttgcggagaagcggtcgcggttggcg
aagctctgggagcgagcgagcatagcgctcgattttgcgatcgatcgggaacggagcgtc
tcgtatagcgaggagcgcagagtatccttggttgccggcatcccggtgggcggaaactat
ttgattccaccggccaccgagttcgcccacagcgttgaagaggatgcgcgtcaagcgcag
ctcgcctcgcaaccgtggaaggagcgcgaggaaatactccggccggtgctgcagaaaatc
tatcgcgacccgagtggcgcgctgtcggcgctcaacgctctggtagcaggcgcagacgtc
gagccgcgcaagattgccgaagatcttggccttgcacccgaacgccttggccgattgcgc
ggctctgaccgcctggtcgatggccgcgccgctcgaaacgagcgcaacgaagccgtggcc
acattgtcggagctgctgactttggcgcgcgcgcaagcaaccgagttccgcaggcaggcg
gagcgcttcgccagccgcgagcaacagcggcgcgtccatatggcattgtccattcccgcg
ctttcgaaaaaggcgatggcgcgtctcgtcgaagtcgaggcggtccgagagcgcggcggg
gttgatgcctacaagacggccttcgcctatgccgctgaggaccgtttgctagtgcaggag
gtaaaggcggtcaacgaggcggtgacctcgcgcttcggctggtctgcattcaccgccagg
gccgatccgatcgccgagcgaaatgttgaagagcggatgccggaaaatctcgccactgag
caccgtcaaaaactggtgcccctgttcgaggtgatcaggcgttttagcgacgagcagcat
ctcgcagaaaagcaggatcgctcgaaaatcgttgccggcgcaagcatcgagttcggaaat
gaagtagtgcccgtgttgcccatgcttgccgccgtcactgagttcaagacacccgtcgcc
gatgaagcgcgggaaagagcgcttgccgttccccattacaatcatcatcgcgccgcgctc
atggatgcggcgacacgcatctggcgcgatcccgccggcgcgatcgccaagatcgaggag
ctcgtcgaaaagggttttgccggcgagcggattgccgcagccatcaccaacgatccggcc
gcttatggcgcactacgcggctccggtcgcatagtggacaagttgcttgctgccggccgg
gagcggaaggccgcgcttcaggctgtgtcggaagccgcaagctgtgtccgttctctcgga
gcgtcctatgccgcggcgtttgaggccgagaccaaggcgatcgccgcagagcgccggcat
atggcggtcgccattcccggtctgtcgcggaaggctgagaatgcgctgcggcagttggtg
gcggagaagaagagggagggcaagctcgaagccgccatgggtctgctcgatcagcgcgtc
gcccaagaattcaccgccgttagtcgggcgctcgacgagcgcttcggtcgcaacgccgtc
ctgcgcggggaggaggacgtcatcaaccgtgtgtcgccggcgcagcgcagcgccttcgag
gcgatgcgagatcggttgcaggtcttgcagcagactgtgcgactgcaacgcagccaggag
accgtttcggagcgtcagcggcgcgtcatcgaacccgtccgcggtattaccgcagagcat
tga
DBGET
integrated database retrieval system
