Ensifer adhaerens Casida A: FA04_29920
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Entry
FA04_29920 CDS
T04507
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
eah
Ensifer adhaerens Casida A
Pathway
eah03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FA04_29920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eah03400
]
FA04_29920
DNA repair and recombination proteins [BR:
eah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
FA04_29920
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ANK76911
LinkDB
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Position
pCasidaAB:complement(497443..498192)
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AA seq
249 aa
AA seq
DB search
MSTSRVRVIDLETAGNGPNDVCEIGWQDVVLEDNGRWVVNDERGALMVNPGRPISPDTMA
IHHILDEQVAGAPYWKNVAPEVLHPHGGIDALAAHRAAFEQRYCTPRLTGGLPWICTWKC
ALRIWPDLPRFSNQMLRYQRMPEGLVHEIGLPAHRGMPDAYVTAHHLRDLLNAASLGQLL
AWSAEPGLLPRVPSGPDRGKGWDRLSTETLTEFLRDRDSDIRFSAQTELQRRGEFEPTAA
DEPVQQTLL
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgacatcccgcgttcgcgtcatcgatctggaaacggccggcaacggaccgaacgac
gtctgcgaaatcgggtggcaggacgtggtccttgaagacaatggacggtgggtcgtcaac
gacgaacgcggcgcattgatggtcaatccgggtcggccgatttcgcccgacacgatggcc
atccatcatattctcgacgagcaagtcgccggcgcgccctactggaaaaatgtggcgcca
gaagtgttgcatccgcacggcgggatcgacgcgttggccgcacatcgtgcagccttcgaa
caacggtattgcacgcctcgtctcaccggcggcttgccctggatctgtacctggaagtgc
gccctacggatttggcccgatctgccacgattttccaaccagatgctccgctaccagcgt
atgccggaagggctcgttcacgagataggtcttccggcccatcgaggcatgccggatgcc
tacgtgacggcccatcatctgcgcgatctgttgaacgctgcatcgctcggtcagttgctg
gcgtggagtgccgagccgggcttgttgccgcgcgtgccctccgggcctgatcgtgggaag
ggctgggatcgccttagtacggagacgcttaccgaatttcttcgcgatagagatagcgac
atccgcttcagcgcccagaccgagttgcaaaggcgcggtgaattcgaaccaaccgctgcc
gacgagccagtgcagcaaaccttgctatga
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