Ensifer adhaerens Casida A: FA04_30825
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Entry
FA04_30825 CDS
T04507
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
eah
Ensifer adhaerens Casida A
Brite
KEGG Orthology (KO) [BR:
eah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eah03032
]
FA04_30825
03400 DNA repair and recombination proteins [BR:
eah03400
]
FA04_30825
Enzymes [BR:
eah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FA04_30825
DNA replication proteins [BR:
eah03032
]
Prokaryotic type
DNA Topoisomerases
FA04_30825
DNA repair and recombination proteins [BR:
eah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FA04_30825
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Top1B_N_bact
Topoisom_I
Motif
Other DBs
NCBI-ProteinID:
ANK77072
LinkDB
All DBs
Position
pCasidaAB:complement(696325..697359)
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AA seq
344 aa
AA seq
DB search
MSRRESPQVGDGADLIYVSDTEPGYTRFRSSSGFVYRRPNGEQLKDSRVLARIQALGLPP
AYENVWICMQPNGHLQATGYDARGRKQYRYHQAWQEMRSNAKYSQLPAFAKTLPRLRRRI
RKHMEGPVDDPFTVLAALAALLDHAPLRIGNSTYVKENGSYGASTLLKRHLKITDDSIKL
NFKGKGGQRIRRRLRNPRLQRLLEGIAELPGRQLFVSVGQDGKPEPIESGRFNRYLAEIS
GAPISAKTFRTWAGSVAAYSAARQAFAQGRRPTIKEMCNAAAEALHNTPAVCRKSYVHPA
VLALAQAEQKIPRVRPNAKAVPGLRADEMQFLRFLNWLARHAQG
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
ttgagccggcgggaaagtccgcaggtaggcgatggcgccgacctcatctacgtctccgac
actgaaccgggttacacccggtttcgttcctcaagcggctttgtctatcggcgtccgaac
ggtgaacagctaaaagattcccgcgttcttgcccgtatccaagcgcttggcttgccccca
gcttacgagaacgtctggatctgcatgcagccaaacggtcatctgcaggcgacaggttat
gatgcgcgtggtcgaaagcaatatcgatatcaccaagcatggcaggagatgcgaagcaac
gccaaatacagccagcttccagcttttgctaaaacgctcccccgcctgcgacgccggatc
cgcaagcatatggaggggcctgtggacgaccctttcaccgtacttgctgcccttgcggcg
ctgctcgaccacgcgccccttcgcattggaaactcgacatacgtgaaggagaacgggagc
tatggcgcctcaacccttcttaagcgccacctcaagattaccgacgatagcatcaagctc
aacttcaagggcaagggcgggcaacgtatccgaagacggctgagaaatccgcgactgcaa
cgcttacttgagggaatcgccgaactcccgggtcgccagctcttcgtatccgtggggcaa
gacggaaaacccgagccaatcgagtcggggcgctttaaccgctatctcgcagagatcagc
ggggcgccaatttcggccaaaacgttcagaacttgggctgggagcgttgccgcatattct
gccgctcgccaagcattcgctcagggtcgacgcccgacgatcaaagaaatgtgcaacgcg
gcggcagaggcgctgcacaacacgccggccgtttgccgtaagagctacgtgcatccggca
gtcctcgctctggcgcaagccgagcagaaaatcccgcgggtaaggccaaacgcaaaagcc
gtacccggacttcgcgccgacgaaatgcagttcctgcgctttcttaattggctcgcccgg
cacgcacagggttag
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