Ensifer adhaerens Casida A: FA04_32200
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Entry
FA04_32200 CDS
T04507
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
eah
Ensifer adhaerens Casida A
Brite
KEGG Orthology (KO) [BR:
eah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eah03000
]
FA04_32200
Transcription factors [BR:
eah03000
]
Prokaryotic type
Helix-turn-helix
Other families
FA04_32200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
HTH_8
HTH_30
HTH_23
HTH_AsnC-type
AAA_5
HTH_38
HTH_24
HTH_11
HTH_IclR
HTH_28
AAA
HTH_Tnp_ISL3
MarR
MarR_2
Mg_chelatase
HTH_20
HTH_29
IclR_C
Zeta_toxin
AAA_2
HVO_A0261_N
HTH_50
TIP49
Motif
Other DBs
NCBI-ProteinID:
ANK77311
UniProt:
A0ABY8HR27
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Position
pCasidaAB:1021254..1023125
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AA seq
623 aa
AA seq
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MSTSLSHIREIERVASGAASPRDEPVVQSWLRCLNDYKLDPTIAQEAYIVPGSKLREHRE
QAEELIRIGRSGLEGLFNQVAEQNYVLLLSDARGVTVDFMGDPTFDNQLRKAGLYLGSEW
SESRAGTCAVGACIVSGQPVIIHQDDHFDASHIGLTCTAAPVFDTLGDLTAVLDISQLRS
PTAKASQQLALHLVSATARRIELANLMTRTRNDWVLRLARSPEFLDVDPDAAIALDGSGR
ITGMTHGGFGALARSMNIRGLQTRNFLGLPLSEVFDIDVDDLPNFMRGRPNGERLLRAKS
GLVLFASAIAPVVSLRTPAAPEARLPRALRDLSQGDATMERVQTRAAKLATRRIPILIQG
ETGSGKEYLARAIHDSCGDNGNFVAVNCAAIPEHLIESELFGYAPGAFTGASQKGKRGLI
EDADGGTLFLDEIGDMPFTLQSRLLRVLSENEIQPIGALKARPIRLRVVSASHRDLAELV
KQGRFREDLYYRLNAATLSLPALRERQDLSWLIDQLRARVEKENHESYRIDTTARAALLA
HEWPGNLRELSNVLRVAAALSENGLIDSECLPEHLFSEAIHSLPGEDDALRQALRDCGDN
VSALARKLGVNRSTIHRRLKRLN
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtcgctgtcgcatattcgtgagatagaacgagtcgcctccggggccgcgagc
ccacgcgacgagcccgtcgtccaatcctggcttcgctgcctcaatgattacaagctggat
ccgacgatcgcgcaggaagcctatatcgttccgggatcgaagctgcgcgagcatcgcgaa
caggcggaagaactgatccgcatcgggcgttccgggcttgaagggctgttcaaccaagtc
gccgaacagaactatgtcctgttgctgtccgatgcccgcggcgtcaccgtcgatttcatg
ggggatccgaccttcgacaatcagctgcgcaaggcgggcctctatctcggctcggagtgg
tctgagagccgggcgggcacctgtgccgtcggggcgtgcatcgtctccggccagccggtc
atcatccatcaggacgatcatttcgacgcgagccatatcggtctgacctgtacggcggcg
ccggtcttcgacacgctcggcgatctgaccgccgtgctcgacatctcccagctccggtcg
cccactgccaaggcaagccagcagctggcgctgcatctggtatccgccactgcgcggcgg
atcgagcttgccaacctcatgacccgcacccgcaacgactgggtcctgcggcttgcccgc
tccccggaattcctggatgtcgacccggacgccgccatcgccctcgacggcagcggccgc
atcaccggcatgacccatggtggcttcggcgcactcgcccgctcgatgaacatccgcggc
ctccagacacgcaatttcctcggccttccgctctcggaggtgttcgatatcgacgtggac
gatttgcccaacttcatgcgcggtcgtccgaacggcgaacgcttgctgagagccaagagc
ggcctagtcctattcgccagcgccatcgcgcccgtcgtcagcctgcgcacgcccgccgcg
cccgaagcgcgcctcccccgagccctgcgcgatctcagccagggcgacgcgacaatggaa
cgggtgcagacccgcgcggcaaaattggccacacgccgcatcccaattctcattcaaggg
gagacgggcagcggcaaggagtatcttgctcgcgcgatccatgacagctgcggcgacaat
ggcaatttcgtcgccgtaaattgcgcagccattcccgaacatctcatcgaatccgaactg
ttcggctacgcacccggtgccttcacgggcgccagccagaaaggtaagcgcggcctgatc
gaggatgcggacggtggcaccctgttcctcgacgagatcggcgacatgccgttcacgctg
caaagccggctgttgcgcgtgctctcggaaaatgagattcagccgattggggcgctgaag
gcccggccaatccgcctgcgcgtcgtctccgcctcccaccgcgatctggcggaactggtt
aagcagggccgtttccgggaagacctctattaccgcctgaacgccgcaacgctctcgctc
cccgccttgcgagagcgtcaggatcttagctggctgatcgatcaattacgcgctcgtgtc
gagaaggagaaccacgagtcctaccgcatcgacacgacggctcgggcggccttgctcgcg
catgaatggcccggaaatctgcgtgagctttccaatgttctgcgcgtggccgcggccctt
tccgaaaatggtctcatcgatagcgagtgcctgccggaacatctcttctccgaagccatc
cactcgttgcccggcgaggatgatgcgttacgccaggcactcagggactgcggcgacaac
gtttcggcgcttgcgagaaagctcggcgtcaaccgttccacgatccaccgccgtctgaag
cggctcaactga
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