Equus asinus (ass): 106822037
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Entry
106822037 CDS
T04645
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
eai
Equus asinus (ass)
Pathway
eai03030
DNA replication
eai03420
Nucleotide excision repair
eai03430
Mismatch repair
eai03440
Homologous recombination
eai03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106822037 (RPA1)
03420 Nucleotide excision repair
106822037 (RPA1)
03430 Mismatch repair
106822037 (RPA1)
03440 Homologous recombination
106822037 (RPA1)
03460 Fanconi anemia pathway
106822037 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eai03000
]
106822037 (RPA1)
03032 DNA replication proteins [BR:
eai03032
]
106822037 (RPA1)
03400 DNA repair and recombination proteins [BR:
eai03400
]
106822037 (RPA1)
Transcription factors [BR:
eai03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
106822037 (RPA1)
DNA replication proteins [BR:
eai03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
106822037 (RPA1)
DNA repair and recombination proteins [BR:
eai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
106822037 (RPA1)
MMR (mismatch excision repair)
106822037 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
106822037 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
Motif
Other DBs
NCBI-GeneID:
106822037
NCBI-ProteinID:
XP_044601124
UniProt:
A0A8C4LL00
LinkDB
All DBs
Position
13:complement(19318336..19375505)
Genome browser
AA seq
616 aa
AA seq
DB search
MVGYLSEGAIAAIMQQGDTSIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLAT
QLNPLVEEERLSSNCICQVNRFIVNTLKDGRRVVILMELEVLKSAEAVGVKIGNPVPYNE
GHGQQQVVPSPVSAASPPTSKPQPQNGSSGMGSTVSKAYGASKTFGKAGGASLVNSSGGT
QAKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVDESGEIRATAFNE
QADKFFPLLDVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDDHHLPTVQF
DFTGIGELENKPKDSLVDIIGICKSYEDATKITVKSNNREVSKRNIYLMDTSGKVVTATL
WGEDADRFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTVIMNPDISEAYKLRGWFDSEGQ
ALDGVSISDLKGGGTGGSNTNWKTLYEVKSENLGQGDKADYFSSVATVVYLRKENCMYQA
CPSQDCNKKVIDQQNGLYRCEKCDSEFPSFKYRMILSVNIADFQENQWVTCFQESAEAIL
GQNTAYLGELKEKNEQAFEEVFQNANFRSFTFRIRVKLETFNDESRIKATVMDVKPVDYR
EYGRRLIMNIRKNALM
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggtgggctatctgagcgagggggccattgcggccataatgcaacagggagatacatcc
ataaaacccatcctccaagtcattaacattcgtcccattactacagggaatagtccaccc
cgttatcgactgcttatgagtgatggattgaacactctatcctctttcatgttggcaaca
cagttgaacccccttgttgaggaagaacggctgtccagcaactgtatttgccaggttaac
cggtttattgttaacactctgaaagatggaaggagagtagttattttgatggagttagaa
gttttgaagtcagctgaagcagttggagtaaagattggcaacccagtgccctataatgaa
ggacacgggcagcagcaagtagttccttctccagtctcagcagccagtccgccaaccagc
aagccccagccacagaatgggagctcaggaatgggttccactgtatctaaggcttatggt
gcctcaaagacttttggaaaagctggaggtgccagccttgtgaacagttctgggggaaca
caggccaaagtggtgcccattgccagcctcaccccttaccaatccaagtggactatttgt
gctcgtgtcaccaacaaaagtcagatccgcacctggagcaactcccggggggaagggaag
ctcttctccatagaactagttgatgaaagtggtgaaatcagagctactgctttcaatgag
caagcagacaagttctttccccttcttgacgtgaacaaggtctattatttctctaaaggc
actctgaagattgctaacaaacagttcacagctgttaaaaatgactatgagatgaccttc
aataatgagacttcagtgatgccctgtgaagatgaccatcacttacctacagttcagttt
gatttcacagggattggtgagctggagaacaagcctaaagactcacttgtagacataatt
gggatctgcaagagctatgaagatgccactaaaatcacagtgaagtctaacaacagagaa
gtttctaagagaaatatctatctgatggacacctcagggaaagtggtgaccgctactctg
tggggagaagatgctgataggtttgatggttctagacaacccgtgatggctatcaaagga
gccagagtttctgattttggtggacggagcctctctgtgctgtcttcgagcacggtcatt
atgaatcctgacatctcagaggcttacaagctccgtggatggtttgactcagaaggacaa
gccttagatggtgtttccatctctgatctaaagggtggaggaacaggagggagcaacacc
aactggaaaactttatatgaggttaaatcggagaacctgggccaaggtgacaaggcggac
tattttagctctgtggcgacagtggtgtatcttcgcaaagagaactgtatgtatcaggcc
tgcccatctcaggactgcaataagaaagtgattgatcagcagaatggattataccgctgt
gagaagtgtgacagtgaatttcccagtttcaagtaccgcatgatcctgtcagtaaatatt
gctgattttcaagagaatcagtgggtcacttgtttccaggagtctgcagaggccatcctt
ggacaaaacactgcttatctcggggagttaaaagagaagaatgagcaggcatttgaggaa
gttttccagaatgccaacttccgatctttcacattcaggatcagggtcaaactagagacc
ttcaatgatgagtctcgaattaaggccactgtgatggacgtgaagcccgtggactacaga
gaatatggcagaaggctgatcatgaacatcaggaaaaacgcactaatgtga
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