Equus asinus (ass): 106822280
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Entry
106822280 CDS
T04645
Symbol
RFC1
Name
(RefSeq) LOW QUALITY PROTEIN: replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
eai
Equus asinus (ass)
Pathway
eai03030
DNA replication
eai03410
Base excision repair
eai03420
Nucleotide excision repair
eai03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106822280 (RFC1)
03410 Base excision repair
106822280 (RFC1)
03420 Nucleotide excision repair
106822280 (RFC1)
03430 Mismatch repair
106822280 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eai03032
]
106822280 (RFC1)
03400 DNA repair and recombination proteins [BR:
eai03400
]
106822280 (RFC1)
DNA replication proteins [BR:
eai03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
106822280 (RFC1)
DNA repair and recombination proteins [BR:
eai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
106822280 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
Rad17
RuvB_N
BRCT_2
AAA_22
AAA_5
AAA_14
AAA_7
AAA_17
AAA_18
nSTAND3
AAA_16
AAA_33
RNA_helicase
NTPase_1
NPHP3_N
AAA_19
TIP49
Motif
Other DBs
NCBI-GeneID:
106822280
NCBI-ProteinID:
XP_044623635
LinkDB
All DBs
Position
3:complement(103330984..103412665)
Genome browser
AA seq
1150 aa
AA seq
DB search
MDIRKFFGVIPSGKKLASETVKKNEKTKSAEETLKAKKGIKEIKVNSSCEEDDFKQKQPN
KKKRIIYDSDSESEETVQVKNAKKQPEKLPLSSKPGKILRQDPVTYISETDEDDDFACKK
AVSKSKENGGSTNSYLGASNMKKSEENTKTKNKPLSPIKLTPTSVLDYFGTGSVQRSDKK
MVSSKRKEPSQNTDDSRLNDEAIAKQLQLDEDAELERQLHEDEEFARTLAMLDEEPKTKK
ARKDPEERETFSSVQATLSKTEKHKYPHKEERKNCSPKKQTKCESSKKSQQHSKSSGSKI
GEPSPKASSTLALLKKKQESSYKETEPVPSKSKENAIELKGETKTPKKTKSSPAKKESIS
PEDSEKRRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLIFVITGVLESIERDEAKS
LIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKIIDEDGLLNLIRTMPGKKSK
YEIALEAEMKKDKSKLERTPQKNGQGKRKISPTKKESESKKSKLTPKRDSSVKSIKKETS
VFRRGLDFKEQVAEETNGDSQSRNLAGDSSENKVENLLWVDKYKPVSLKTIIGQQGDQSC
ANKLLRWLQNWHKSPSEEKKHAAKFGKFAGKDDGSSFKAALLSGPPGVGKTTTASLVCQE
LGYSYMELNASDTRSKNSLKEIVAESLNNTSIKGFYSSGLAHSGSMKHALLMDEVDGMAG
NEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLIHYCFDLRFQRPRVEQYFSYFHFX
INAPEIAMSCIKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSH
RAKKDIKLGPFDVARKVFAAGEETAHMSLMDKSDLFFHDYSIAPLFVQENYIHVKPVAAG
GDMKKHLMLLSRAADSICDGDLVDRQIRSKQNWSLLPTQAIYASVLPGELMRGYLTQFPT
FPSWLGKHSSTGKHDRIVQDLALHMSLRTYSSKRTVNMEYLSHIRDALVQPLTSQGVEGV
QDVVALMDTYYLMKEDFENIMEISSWGGKPSPFSKLDPKVKAAFTRAYNKEVHLTPYSLQ
AVKTSRQSTGPALDSEYNEELNEDDSQSDEKDQDSMETDAMIKKKPKSSNPSKSERDKES
RKGKGKSSKK
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atggatattcggaaattctttggggttataccaagtggaaagaaacttgcaagtgaaaca
gtaaagaagaatgagaaaacaaagtctgctgaagaaactttaaaagcaaagaaaggaata
aaggaaatcaaggtaaatagttcttgtgaagaagatgactttaaacagaagcaaccaaac
aagaaaaagaggatcatctatgattcagattcagaatcagaggagacagtgcaggtaaaa
aatgccaaaaagcaaccagaaaaattgccattgtcttctaaacctggtaaaattctgcgg
caggatcctgttacatacatttcagaaacagatgaagacgatgactttgcatgtaagaag
gcagtctctaagtcaaaagagaatggaggatctacaaatagttaccttggagcatcaaac
atgaaaaagagtgaagagaacactaagaccaagaataagcctttatcaccaataaaactt
acccctacatcagtgcttgattattttggaactgggagtgtccaaagatcagataagaag
atggtgtcaagcaaaagaaaagagccttctcaaaatacagatgattccagattaaatgat
gaagccatcgccaagcaattgcaacttgatgaagatgcagagctggagagacaactgcat
gaagatgaagagtttgccagaacgttagccatgttggatgaagaacctaagaccaaaaag
gctcgaaaggacccagaagagagagaaacattttcatctgtccaagccactttaagtaaa
acagaaaaacataaatatcctcataaagaggaaagaaagaattgcagtcctaagaagcaa
actaaatgtgaaagttcaaaaaaatctcagcaacattccaagtcgtcaggttccaaaata
ggagaaccttctccaaaagccagttccacgctggcacttttgaaaaaaaaacaagagagt
tcttataaagaaacagagcctgtgccctcaaaaagcaaagaaaatgccattgaattgaaa
ggagaaacaaaaactcctaagaaaaccaaaagttcaccagctaaaaaagagtctataagt
cctgaagattctgaaaagagacgcactaattatcaagcttatcgaagttacttaaatcga
gagggtcccaaagctctgggctccaaagaaataccaaagggagctgaaaattgcttggaa
ggccttatatttgtaatcacaggagtgctggagtccattgaacgagatgaggccaagtct
ctaattgagcgttatgggggaaaagtaacaggaaatgttagcaagaaaacaaactacctt
gtcatgggtcgtgatagtggacagtccaagagtgataaggcagcagccttggggacaaaa
attattgatgaagatggcctattgaatctcattcgaactatgccaggcaagaagtccaag
tatgagatagcacttgaagccgagatgaagaaagacaagtccaaattggagagaacaccc
caaaaaaatggccaaggaaaaagaaaaattagtccaactaagaaggaatcagaatccaaa
aagagcaaactgactcccaaaagggacagctctgtgaagtcaataaaaaaggagacaagt
gtgtttcggagaggcctggacttcaaggagcaggtggccgaggagacaaatggtgacagc
cagtctagaaatttggctggtgacagcagtgaaaacaaggtggaaaatttgctctgggtg
gataaatataagccagtctcgctcaagaccataattggacagcaaggtgaccagagctgt
gccaacaaactcctccgctggctccaaaactggcacaagagtccatcagaagagaagaaa
cacgcagccaagtttggtaaatttgctggcaaagatgatggctctagttttaaagcagct
ttgctctcaggccctccaggtgttggcaaaacaaccacagcctctctggtttgtcaggaa
ttgggatatagctacatggaactgaatgcaagtgacactcggagtaagaacagtttaaag
gagattgttgctgaatcactgaataacaccagcatcaaaggcttttattcaagtggatta
gctcattcaggaagcatgaagcatgctctcctcatggatgaagtagacggcatggcaggc
aatgaagacagaggaggaattcaggaattaattggccttataaaacatacaaaaattccc
atcatttgtatgtgcaatgatagaaatcatcccaagatccgttctttgattcattattgt
tttgatcttcgttttcaaagacctcgcgttgaacaatatttctcctattttcatttttga
attaatgctcctgaaattgctatgtcttgcattaaagagggtttaaagatcccccctcca
gctatgaatgaaataattttgggagccaatcaagatatcagacaggttttacacaatctg
agtatgtggtgtgcacgaagtaaggcactaacctatgaccaggccaaggctgattctcat
agagccaaaaaggatatcaaactgggcccatttgatgttgcccggaaagtgtttgcagct
ggagaggagactgctcatatgtcacttatggacaaatcagatctcttttttcatgattat
tcaatagcacccctctttgtccaggagaactacatacacgtgaagcctgtagctgcaggg
ggtgacatgaaaaagcacttgatgcttttaagcagagcggcagatagcatatgtgatggt
gacttggtggaccgtcagattcggagtaagcaaaactggagtcttctgcccacacaggcc
atttatgccagtgttcttcctggagagttaatgagggggtacctgacccagtttcccacc
ttcccaagctggttggggaagcactcatctacgggcaaacacgatcgtattgttcaggac
ctagcactgcacatgagtctcagaacttactccagcaaaaggactgtaaacatggaatat
ctgtcacatataagggatgcacttgtacagcccttgacctcacaaggggtagaaggagta
caggatgttgttgctcttatggacacatattatttgatgaaagaagactttgagaatatc
atggaaattagcagctggggaggcaaacctagtcccttctccaagctggatcccaaggtg
aaagcagcctttacaagagcttacaataaggaagtccaccttactccgtattcacttcag
gcagtaaagacgtccagacagagcacaggcccagcactggattctgagtataacgaagaa
ttaaatgaagatgactctcaatctgatgagaaagatcaagactctatggaaactgatgct
atgatcaagaaaaagccaaaatcttcaaatccttcaaaatcagaaagagataaggagtcc
agaaaaggaaaaggaaaaagttcaaagaaatga
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integrated database retrieval system
