Equus asinus (ass): 106822415
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Entry
106822415 CDS
T04645
Symbol
PDZRN4
Name
(RefSeq) LOW QUALITY PROTEIN: PDZ domain-containing RING finger protein 4
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
eai
Equus asinus (ass)
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
eai04121
]
106822415 (PDZRN4)
Enzymes [BR:
eai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106822415 (PDZRN4)
Ubiquitin system [BR:
eai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
106822415 (PDZRN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
Sina_ZnF
zf-rbx1
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
106822415
NCBI-ProteinID:
XP_044612152
LinkDB
All DBs
Position
22:complement(25595524..25930847)
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AA seq
1040 aa
AA seq
DB search
MGFALERFSEAVDPDLECKLCGQVLEEPLCTPCGHVFCARCLLPWAARRRRCPLQCQPLA
PGELYRVLPLRSLIQKLRIQCDYRARGCDHSVRLRELAAHVERCDFGPTRRHHRRRGCGS
GPGCRGGGNVPARGRGGPAPRGRPGRGRARGAPPGGRCGSGQGPRPQVLAWRRREKALLA
QLWALQGAVQLTVRRYQEKFTQYMAHVRNFAGDLGGGHSPDGEHKPFTIVLERENDTLGF
NIIGGRPNRNNQEETSAEGIYVSKILENGPADRADGLEIHDKIIEVNGKDLSKATHEEAV
EAFRNAKEPIVVQVLRRTPLSKPAYGAAPEVQLMNASTQTDITFEHIIALTKLRPPTPPV
PDICPFLLSDSCHSLHPMEHEFYEDNEYLSSLPADADRTEDFEYEEVELCRVSSQEKLGL
TVCYRTDDEEDTGIYVSEVDPNSIAAKDGRIREGDRILQINGEDVQNRGEAVALLSSDEC
KRIVLLVARPEIQLDEGWLEDERNEFLEELNLEMLEEQHNEAMQRTANEVEQPKKQEEEE
GTTDTATSSSNNHEKDSGVGRTDESLRNDESSEQENAAEDPNSTSLKSKRELGHSQDTLG
SVELRCNESFVSGEYIDSDCTGNQDEECERFRQLLELKCKIRNHGEYDLYYSSSTIECNQ
GEQEGVEHELQLLNEELRNIELECQNIMQAHRLQKVTDQYGDIWALHDGGFRNYNTSIDM
QRGKLDDIIEHPEKSDKDSSSAYNTAESCRSTPLTVDRSPDSSLPRMINLTNKKNLRSTM
AASQSSSGQSSKESTSTKAKTTEQVCGIEGKEKISESNKISDQEKAGSEHIPYLSPYHSS
SYRYANIPAHARHYQSYMQLIQQKSAVEYAQSQLSLVSMCKESQKCSEPKMEWKVKIRSD
GTRYITKRPVRDRILKERALKIKEERSGMTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQ
RRRREFMMRSRLECLKESPQSGSEGKKEINIIELSHKKMMKKRNKKILDNWMTIQELMTH
GAKSPDGTRVHNAFLSVTTV
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgggctttgccctggagcgcttctccgaagccgtggacccggatctcgagtgcaagctg
tgcggccaggtgctggaggagcccctgtgcacgccgtgcgggcacgtcttctgcgcccgc
tgcctgctgccctgggcggcgcggcggcgccggtgcccgctgcagtgccagcccctggcg
cccggcgagctgtaccgggtgctgcctctgcgcagcctcatccagaagctgcgcatccag
tgcgactaccgcgcccgcggctgcgaccactcggtccggctgcgcgagctggccgcgcac
gtcgagcgctgcgacttcggccctacccgccgccaccaccgccgccggggctgcggctcg
gggcccggctgccgcggcggtggaaacgtgcccgcgcggggtcgaggcggaccggcgccc
cggggccgaccggggcgggggcgcgcgcgcggggcgccgccgggcggtcgctgcgggagc
ggacaggggcccaggccccaagtccttgcctggaggcggcgcgagaaggcgctgctagcg
cagctctgggcgctgcagggcgccgtgcagctcaccgtccgcaggtaccaggagaagttc
acccagtacatggctcacgtccgcaacttcgccggggacctgggcggcggccacagcccg
gatggagaacataagccattcaccattgtgttagaaagagaaaatgacacgttgggattc
aatattataggaggtcgaccaaatcggaataatcaagaagaaacatcagcagaaggaatt
tatgtttcaaaaattttggaaaatggacctgctgacagagcagatggcctggagattcat
gacaagatcattgaggtcaatgggaaggatctctcaaaggccacccatgaagaggcagtg
gaagcttttcggaatgccaaggagcccattgtggtccaggtgttaaggcgaacgcctctc
agtaaaccagcctatggagcagccccagaagtgcagctcatgaacgccagtactcagacg
gacatcacatttgaacacatcatagccctgaccaaactgaggccacctacccctccagtg
ccagatatctgtccatttctgctctcagacagctgccattctcttcatccgatggaacat
gaattttatgaggacaatgagtatctttccagcttgcctgctgatgcggacagaacagag
gactttgaatacgaggaggtcgagttgtgtcgtgttagcagtcaagagaagctgggcctg
acagtctgttaccgaacggatgatgaagaagacaccggcatttatgtcagcgaggtagat
ccaaatagcattgctgccaaagatggccgaattcgagaaggagatcgcattttgcaaata
aatggggaagatgtccagaatcgaggagaagcagtggcattgctgtctagcgatgagtgc
aagagaattgtgctgctggttgcaaggccagagattcagctggatgaaggctggctggaa
gatgaaaggaatgaattcttagaggagttaaacttggagatgttggaagaacagcataat
gaagcaatgcaacgcactgccaatgaggtggagcagccaaagaaacaagaagaagaagaa
ggtacgacagacacagcaacatcctcatccaacaaccatgagaaggacagtggagtgggg
cgcaccgacgaaagcttgcgaaatgatgagagctcggagcaggagaacgcagctgaggat
cccaacagcacgtctttgaagagcaagagagagctggggcacagccaagacactctagga
agcgttgagcttcggtgcaatgagagcttcgtgtctggtgaatacattgactcagactgc
actggcaaccaggatgaggagtgtgaaaggttccggcagctcttggagctcaagtgcaag
attcgaaaccatggagagtatgacctgtattactcgagcagcacaatagaatgcaatcaa
ggggaacaagagggagtggagcatgagctacagttgcttaatgaagaactaagaaatatt
gaactcgagtgccagaatatcatgcaggctcacaggctccagaaagtgacagaccagtat
ggagacatctgggcactgcatgatggaggattccgaaattataacaccagcatagacatg
caaaggggaaagctagatgacatcatcgaacacccagaaaagtcagacaaggacagttct
agtgcttacaacacagctgaaagctgcagaagcactccgctcactgtggaccgttcccct
gacagttcccttccaagaatgatcaacctcaccaataagaaaaacctgagaagcacaatg
gcagccagtcagtcctcctctggacagagcagtaaagagtcgacctccaccaaagccaaa
accactgaacaagtttgcggcattgaaggcaaggagaagatttcagaaagcaacaagatt
tctgatcaagagaaggcaggcagcgaacacatcccttacctctctccttatcacagctcc
tcatatagatatgccaacatcccagcccacgcccggcattatcagagctacatgcagtta
attcaacagaaatctgctgtcgagtatgcacagagtcagctcagtttggtgagcatgtgc
aaggagtctcagaagtgttcagagcccaagatggaatggaaggtgaaaattaggagcgac
gggacacggtacataacaaagagaccagtgcgagaccggattctgaaggaacgtgcctta
aagatcaaggaggagcggagtggtatgacaacagacgatgacaccatgagcgagatgaaa
atggggcgctactggagcaaagaggagagaaagcaacacctggttcgggccaaagagcag
cgtcggcgccgagagttcatgatgcggagccggttagagtgtcttaaggagagtcctcag
agcggcagtgagggcaagaaggagatcaacatcattgaactgagtcacaaaaagatgatg
aaaaagagaaacaagaaaattttggacaactggatgacaatccaagaactgatgacccat
ggagccaagtctcctgatggcacacgagttcataatgcctttttgtcagtcaccaccgta
tga
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