Equus asinus (ass): 106822486
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Entry
106822486 CDS
T04645
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
eai
Equus asinus (ass)
Pathway
eai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106822486 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eai03019
]
106822486 (EDC4)
Messenger RNA biogenesis [BR:
eai03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106822486 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
106822486 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
DUF445
Beta-prop_HPS5
WDR55
Motif
Other DBs
NCBI-GeneID:
106822486
NCBI-ProteinID:
XP_014683200
LinkDB
All DBs
Position
28:45347959..45359343
Genome browser
AA seq
1409 aa
AA seq
DB search
MASSCASIDIEDATQHLRDILKLDRPAGGPSAESQRPSNAYNGDLNGLLVPDPLCSGDGT
STNKPGLRAMPPINLQEKQVICLSGDDSSTCIGILAKEVEIVASSDSSISSKARGSNKVK
IQPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFTGSV
ADLAFAHLNSPQLACLDEAGNLFVWRLALVNGKIQEEILVHIRQPEGTPLNHFRRIIWCP
FILEESEDCCEEGSPTVALLHEDRAEVWDLDMLRSSHNTWPVDVSQIKQGFIVVKGHSTR
LSEGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKK
QDPEVPFWRFLITGADQNRELKMWCTVSWTCLQTIRFSPDIFSSVNVPPSLKVCLDLSAE
YLILSDVQRKVLYVMELLQNQEEGRACFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLP
AEEENDSLGADGTHGASAMESAAGVLIKLFCVHTKALQDVQIRFQPQLNPDVVAPLPTHP
AHEDFAFGESRPELGSESLASAAHGSQPDLRRIVELPAPADFLSLSSETKPKLMTPDAFM
TPSASLQQITASPSSSSSSSSSSSSSSSSSSSLTAVSAMSSTSAVDPSLPSLPATRPPEE
LTLSPKLQLDGSLTVSSSSSLQASPRSLLPGLIPGPADKLTSKGPGQVPAAAAALSLELQ
EVEPLGLTQASPSRTRSPDVISSASTALSQDIPEIASEALSRGFGSSAPEGLEPDSMASA
ASALHLLSPRPRPGPELGSQLGLDGSPGDGDRHSTPSLLEAALTQEATAPDSQVWPTAPD
ITRETCSSLAESPRNGLQEKHKSLAFHRPPYHLLQQHDSQDVSAEQSDHDDEVASLASAA
GGFGTKVPTPRLPAKDWKTKGSPRASPKLKRKGKKDDGDSAMGSRLMEHQVAELPEDWPA
LIWQQQRELAELRHSQEELLQRLCTQLEGLQSTVMGHVERALESRHEQEQRRLERALAEG
QQRGGQLQEQLTQQLSQALSSAMAGRLERSIRDEIKKTVPPCVSRSLEPVAGQLSNSVAT
KLTAVEGSMKENISKLLKSKNLTDAIARAAADTLQGPMQAAYREAFQSVVLPAFEKSCQA
MFQQINDSFRLGTQEYLQQLESHMKSRKAREQEAREPVLAQLRGLVSTLQGATEQMAATV
SSSVRAEVQHQLHLAVGSLQESILAQVQRIVKGEVSVALKEQQAAVTSSIMQAMRSAAGT
PVPAAHLDCQAQQAHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPGQVFGQPPCP
LSQPVLLSLIQQLASDLGTRTDLKLSYLEEAVMHLDHSDPITRDHMGSVMAQVRQKLFQF
LQAEPHNSLGKAARRLSLMLHGLVTPSLP
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcctgcgcgagcatcgacatcgaggacgccacgcagcacctgcgggacatc
ctcaagctggaccgacccgctgggggccccagtgcagagagccagcggccatctaatgcc
tacaatggggacctcaacgggctcctggtcccagaccccctctgctcaggtgatggtact
tcaacaaacaagcctggtctccgggccatgccacctattaatctgcaggaaaagcaggtc
atctgcctttcaggagacgacagctctacctgcatcgggattttggccaaggaggtggag
attgtggccagcagtgactctagcatctctagcaaggcacgggggagcaacaaggtgaaa
atccagcctgttgccaagtatgactgggagcagaaatactactatggcaacctgattgct
gtgtccaattctttcttggcctatgccattcgggctgccaacaatggctcagcaatggtg
cgggtgatcagtgtcagcacttcagagcggaccctgctcaagggcttcacaggcagtgta
gctgatctcgcctttgcacacctcaactccccacagctggcctgcctggatgaggcaggc
aacctgtttgtgtggcgcttggctctggttaatggcaaaattcaagaagagattttggtc
catatccggcagccagagggcacaccactgaaccacttccgtaggatcatctggtgcccc
ttcatcctcgaggagagtgaggactgctgtgaggagggcagcccaacagtggccctcttg
catgaggaccgggctgaggtgtgggacctggacatgctgcgctccagtcacaacacctgg
cctgtggatgtcagccagatcaagcagggcttcatcgtggtaaaaggccatagcacgcgc
ctaagtgaaggagccctctcccctgatgggactgtcctagctaccgcaagccatgatggt
tttgtcaagttctggcagatctacattgagggccaggatgagccaaggtgtctgcatgag
tggaagccacatgatgggcgacccctctcctgcctcctgttctgtgacaaccacaagaaa
caggaccctgaggtccctttctggaggttcctcattactggcgctgaccagaatcgggag
ctaaagatgtggtgcacagtatcctggacctgcctgcagaccattcgcttctccccggat
atcttcagctcagtgaatgtgccccccagcctcaaggtttgcctggatctctcagcagaa
tacttgattctcagcgatgtgcaacggaaggtcctctatgtgatggagctgctgcagaac
caggaggagggccgtgcctgcttcagctccatctctgagttcttgctcacccaccctgtg
ctgagcttcggtatccaggttgtgagtcgctgccggctgcggcacactgaggtgctgcct
gctgaggaggagaatgacagcctaggggctgatgggacccacggagccagtgccatggag
tctgcagctggtgtgctcatcaagcttttttgtgtgcatactaaggcattgcaggatgtg
cagatccgtttccagccacagctgaaccctgatgtggtggccccactccccacccaccct
gcccatgaggactttgcatttggagagtctcggcctgaactgggctccgagagcctggct
tcagctgctcatggctcccagcctgacctccgacgcattgtggagctgcctgcacctgct
gacttcctcagtctgagcagtgagaccaagcccaagctgatgacacctgacgccttcatg
acacctagcgcctccctgcagcagatcactgcatcccccagtagtagtagcagcagcagc
agcagcagcagcagcagcagcagcagcagctcctctcttacagctgtgtctgccatgagc
agtacctcagctgtggacccctccttgcccagccttcctgccaccaggccacctgaggag
ctgaccttgagccccaagctgcagctggatggcagtctgacagtgagcagcagcagtagc
ctgcaggcaagcccacgcagcctcctgcccggcctgatcccaggtccagctgacaaattg
acttccaaaggacctgggcaggtgcctgctgctgctgctgcactatccctggagctgcag
gaagtggagcccctggggctaacccaggcttcccctagccgcactcgctcgccggatgtt
atctcctcagcttcgactgccctgtcccaggacatccctgagattgcatctgaggccctg
tcccgtggctttggctcctctgctcctgagggccttgagccagacagtatggcttcagct
gcctcagcactgcacctgctgtccccacggccccgaccagggcctgagcttggctcccag
cttggcctagatggaagccctggggatggggatcggcatagtaccccttcactcctggag
gcggccttgacccaggaggccacagcccctgacagtcaggtctggcctacagcaccagac
attactcgtgagacctgcagcagcctggcagagagccccaggaatggcctccaggaaaag
cacaagagcctggccttccaccgaccaccttatcacctgctgcagcaacatgacagccag
gacgtcagcgctgagcaaagtgaccacgacgatgaggtagccagccttgcctctgctgca
gggggctttggcaccaaagtccccactccacggctgcctgccaaggactggaagaccaag
ggatcccctcgggcctcacccaagctcaagaggaagggcaagaaggatgatggggattca
gccatgggatctcggctcatggagcaccaggtggcagagcttcctgaggactggccagca
ttaatttggcaacagcagagagagctggcagagctgcggcacagccaagaagagctgctg
cagcgtctgtgcacccaacttgagggcctgcagagcactgtcatgggccatgtagaacgt
gctctagagtcacgacacgagcaggagcagcggcggctggagcgggcattggctgagggg
cagcagcggggtgggcagctgcaggagcagctgacacaacagctgtcccaggcactgtct
tcagctatggctgggcggttggagcggagcatacgagatgagatcaagaagacggtacct
ccgtgtgtctctaggagtctggagcccgtggcaggccaactgagcaactcagtggccacc
aagctcacagccgtggagggtagcatgaaagagaatatctccaagctgctaaagtccaag
aacttgactgatgccattgcccgagcagctgcagacacattacaggggccaatgcaggct
gcctaccgtgaagccttccagagtgtggtgctgcctgcctttgagaagagctgccaggcc
atgttccaacagatcaatgatagcttccgactgggcacacaggaatacttgcagcagcta
gagagccacatgaagagccggaaggcacgagagcaggaggcgcgggagcctgtgttggct
cagctaaggggcctggtcagcacactgcaaggtgccactgagcagatggcagccactgtg
tccagcagtgttcgggctgaggtgcagcaccagttgcatttggctgtgggcagcctgcag
gagtcaattttagcacaagtccaacgcattgttaagggtgaggtgagtgtagcactcaag
gagcagcaggctgccgtcacctctagcatcatgcaggccatgcgctcagcagctggcact
cctgtccctgctgcccacctcgactgccaggcccagcaagcccatattctgcagctgctg
cagcagggccacctcaatcaggccttccagcaggccctgacagctgctgacctgaacctg
gtgctttacgtgtgtgaaactgtggatccaggccaggtttttgggcagccaccctgccca
ctctcccagcccgtgctcctttctctcatccagcagctggcctctgaccttggcactcga
actgacctcaagctcagctacctggaagaggctgtgatgcacctggaccacagcgacccc
atcactcgggaccacatgggctccgtcatggcccaggtgcgccagaagctcttccagttt
ctgcaggctgagccacacaactcacttggcaaagcggcccggcgtctcagcctcatgctg
catggccttgtgacccccagcctcccttag
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integrated database retrieval system
