Equus asinus (ass): 106822718
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Entry
106822718 CDS
T04645
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4 isoform X2
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
eai
Equus asinus (ass)
Pathway
eai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106822718 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eai03041
]
106822718 (PRPF4)
Spliceosome [BR:
eai03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
106822718 (PRPF4)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
PRP4
Beta-prop_EML
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_Vps41
WD_LRWD1
Beta-prop_IFT140_1st
WD40_like
Ge1_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
106822718
NCBI-ProteinID:
XP_014683490
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Position
10:complement(28439517..28462009)
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AA seq
528 aa
AA seq
DB search
MLHATQASASALGPLPATKTKAPDDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKE
GLKAGIEAGNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRA
LGEPITLFGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGPNSL
KVARLWIANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPI
SYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDV
NLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEA
QEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGIN
FSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTA
KIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgctccacgccacccaggcctcagcgtcagctctgggcccacttccggcaaccaaaacc
aaggcacccgatgacttggtggctcctgttgtgaagaaaccacacatctattatggaagt
ttggaagagaaggagagggagcgtctggccaaaggagagtctgggattttgggaaaagaa
ggacttaaagcgggaattgaagcaggaaatattaacataacctctggagaagtgtttgaa
attgaagagcacatcagtgagcgacaggccgaagtattagctgagtttgaaagaaggaag
cgagcccggcagatcaatgtttctacggatgactcagaggtcaaggcttgccttagagcc
ttgggcgagcccatcacgctttttggagaggggcctgctgagagaagagaaaggttaaga
aatatcctctcagtagtcggtactgatgccttaaaaaagaccaaaaaagatgatgagaaa
tctaagaagtccaaagaagagtatcagcaaacctggtaccatgaaggaccaaacagcctg
aaggttgctagactgtggattgctaattattcactgcccagagccatgaaacgcttggaa
gaggcccgtctccacaaagagattcctgagacaactaggacctcccagatgcaagagctg
cacaaatctctccggtctttgaataatttctgcagtcagattggggatgatcggcctatc
tcctactgccactttagtcccaattccaaaatgctggccacagcttgttggagtgggctt
tgcaagctctggtctgttcctgattgcaaccttcttcacactctccgaggccataacaca
aacgtaggagcaattgtattccatccgaaatccactgtctccttggaccaaaaagatgtc
aatctggcctcctgtgctgctgatggctctgtgaagctttggagccttgacagtgatgaa
ccagtggcggatattgaaggccatacagtgcgcgtggcccgtgtgatgtggcatccatca
ggacggttcttgggcaccacctgctatgaccgctcatggcgcttatgggatttggaggct
caagaggagatcctgcatcaggaaggtcacagcatgggtgtgtatgacattgccttccat
caagatggctctttggctggcactgggggactggatgcatttggtcgagtttgggacctg
cgcacaggacgttgtatcatgttcctagaaggccacctgaaggaaatctatggaataaat
ttctcccccaatggctaccacattgcgactggcagtggtgacaacacctgcaaagtgtgg
gaccttcgacagcggcgttgcgtctataccatccctgcccatcagaacttggtgactggc
gtcaagtttgagcctatccatgggaatttcttgctcactggtgcctatgataacacagcc
aagatctggacccaccccggctggtccccgctgaagactctggctggccacgaaggcaaa
gtgatgggcctagacatttcttccgatgggcagctcatagccacgtgctcatatgacagg
accttcaagctctggatggctgaatag
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integrated database retrieval system
