Equus asinus (ass): 106823418
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Entry
106823418 CDS
T04645
Symbol
COL17A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XVII) chain
KO
K07603
collagen type XVII alpha
Organism
eai
Equus asinus (ass)
Pathway
eai04382
Cornified envelope formation
eai04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
106823418 (COL17A1)
09158 Development and regeneration
04382 Cornified envelope formation
106823418 (COL17A1)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
DUF2868
Motif
Other DBs
NCBI-GeneID:
106823418
NCBI-ProteinID:
XP_044607405
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All DBs
Position
2:72444870..72495532
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AA seq
1498 aa
AA seq
DB search
MDVTRTNKRDGTEVSERIITETVTTRLTSLPPKGGTSNGYAKTGSLGGGSRLEKQSLMHG
SSGYINSSGSTRGHASTSSFRRAHSPASTLPNSPGSTFERKTHVSRHGTYEGSSSGNSSP
EYPRKEFASSSTRGRSQTRESEIRVRLQSASPSTRWTELDDVKRLLKGSRSASVSPTRNS
SNTLPIPKKGTVETKMVTASSQSVSGTYDTTILDANLPSHVWSSTLPAGSSMGTYHNNVT
AQSSSLLNTNAYSAGSVFGVPNNMASCSATLHPGLSAGSSVFGMQNNLAPSSSTLSHGMT
TTSTAYGVKKNMPQSPPVVSTGVSTSAASTTSVQNDELLHKDCKFLIREKDNVPATKKEM
ELLIMTKDSGKVFTASPASMSSTSFSEDTLKKEKQAAYTADTYLISDTNGDVKTVSTKAK
AASAGGXEWRIFHGYDHRSDGGGGGGVGSGGGGPWGAVPAWCPCGSSCSWWKWLLGLLLT
WLLLLGLLFGLIALAEEVRKLKARVDELEKTRNMRVMEEKVEAQVQGDKPEVGKGMGKTG
LYDDGQKEVLWEFVRNKLMMEQENGNLRGSPGPKGDMGSQGPKGDRGLPGTPGIPGPLGH
PGPEGPKGQKGSVGEPGMEGPMGQRGREGPAGPRGEPGPPGFGEKGDRGAAGVPGIQGPP
GVPGSVGPKGSSGSPGPQGPPGAIGLQGLRGEAGLPGVKGDKGPMGPPGSKGDQGEKGPR
GLTGEPGLRGLPGSVGEPGAKGAMGPAGPDGQQGPRGEQGLTGMPGIRGPPGPSGDPGKP
GLTGPQGPQGLPGTAGRPGPKGEPGAPGRIVTSEGSSTITVPGPPGPPGAMGPPGPPGVP
GPIGPAGLPGQQGPRGEPGLAGESFLSSTQSLSEVLSTQGLDLRGPPGPPGPPGPPGASI
PGPPGPRGPAGEGLPGPPGPPGSFLTGSETFFSGPPGPPGPPGPKGDQGPPGPRGHQDSS
SLGLNLQGPPGPPGPQGPKGDKGDPGVPGAVGVPGGHSQGGSPSSTVFLPGPPGPPGPPG
PPGSLSSSGLEIQQYISDYMQSDIIRSYFSGVQGPPGPPGPPGPVTTIRGETFDYSELAS
LVVSYLQTSGTSIGLSLASVSSEDILAMLQRDEVRQYLRQYLMGPQGPPGPPGAGGDWSL
QSLDYAELSSRILSYMSSSGISIGLPGPPGPPGLPGTSYEELLSLLQGSEFRGIIGPPGP
PGPPGIPGNAWSSISVEDLSSYLHTAGLSSIPGPPGPPGPPGPRGPPGVSGALATYAAEN
TDSFRSELISYLTSPDVRSFIVGPPGPPGPQGPPGDSRLVSMDGPYSRGSSSSSGSSYSS
SMGIGGASEGSLGEGGAFGLDMGLGRGYGAAAGNGMYGGNGGYFGAGFAGGLDYNELAVR
VSESLQRQGLLQGMAYTVQGPPGRPGPQGPPGISKVFSAYSNVTEDLMDFFRTYGAIPGP
PGQKGEVGIPGPKGDRGPAGPPGRPGSPGPRGHKGEKGDRGDQVYAGRRRRRSVATKP
NT seq
4497 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcaccaggacaaacaaacgagacggcactgaagtctctgaaagaattatcaca
gaaacagtaactacaagacttacatccttaccaccaaaagggggaaccagcaatggctat
gccaaaacaggttctctcggtggagggagccggctggagaaacagagcctgatgcacggc
agcagcggctacataaactcaagtggaagcacacgtggccatgcctccacctccagtttc
aggagggctcattcacctgcctccacgctgcccaactcaccaggctcaacttttgaaagg
aaaactcatgtcagccgccatggaacctacgaagggagctccagtggcaactcttccccg
gagtaccctcgcaaggaatttgcatcttcttcaaccagaggaaggagccaaacacgagag
agcgagatccgggttcgactgcagagtgcatccccgtctactcgatggacggaattggat
gatgttaagcgtttgctcaaggggagccgatcagcaagtgtgagccccacccggaactcc
tccaacaccctccccatccccaagaaaggcaccgtggagaccaaaatggtgacggcgagc
tcccagtcagtatccggcacctatgacacaaccatcctggatgccaacctcccctcccac
gtgtggtcctccaccttgccagcggggtcctccatggggacctatcacaacaacgtgacg
gcccagagctcgtccctcctcaacaccaacgcctattctgcaggatcggtcttcggagtt
cccaataacatggcgtcctgctctgccaccctgcaccctggactcagtgccggctcctca
gtgtttggcatgcagaacaatctggcccccagctcgtccaccctgtcccatggcatgacc
accacctccacagcgtacggtgtgaagaagaacatgccccagagtccccccgtcgtgagc
acgggcgtgtccacctctgccgccagcactacaagtgtccagaatgatgagctcttgcac
aaggactgtaaattcctgatccgggaaaaagacaacgtgcctgctaccaagaaggagatg
gagctgctgatcatgaccaaggacagtgggaaggtcttcacagcctcccccgccagcatg
tcttcaacttctttttcagaggataccctaaaaaaggaaaagcaagcagcctacactgct
gacacctacctaatctcagacactaatggagacgtgaagactgtgtccacaaaggccaag
gccgcctctgcaggtgggtgagaatggcggattttccatggctatgaccaccgtagcgat
ggtggtggcggtggtggtgttggcagcggtggcgggggcccgtggggggcagtgccagcc
tggtgcccctgcggctccagctgcagctggtggaaatggctactgggcctgctgctcacc
tggctgctgctcctggggctgctctttggcctcattgctctagcggaggaggtgaggaag
ctgaaagcgcgtgtggacgagttggagaaaaccaggaacatgcgggttatggaagagaag
gtcgaggctcaggtgcagggtgacaagcctgaggtgggaaaaggcatggggaaaactggg
ctttacgacgacggccagaaggaggtgctctgggaattcgtgaggaacaagctgatgatg
gaacaagaaaacggaaatctccgaggaagcccgggccctaaaggtgacatgggaagtcaa
ggccctaaaggagaccgaggactccctgggactccaggtatccctgggcccttgggccac
ccaggtccagaaggaccaaagggacaaaaaggcagcgtgggagagcccggcatggaggga
cccatgggccagagagggcgagaaggccccgcgggacctcgcggtgaaccagggcctcct
gggtttggagagaaaggggacagaggggctgctggtgtgccgggcattcagggcccacct
ggtgtcccaggttctgtgggtcccaaaggttccagcggttctcccggcccacagggcccc
ccaggcgctataggtctccaagggctccgaggcgaagcgggactccctggtgtcaaaggt
gacaaagggcctatgggaccaccaggatccaaaggtgaccaaggtgaaaaaggaccccga
ggtctcacaggcgagcctggcttgagaggtttgcctggctctgtgggcgagcccggggct
aaaggagctatgggacccgctggcccagacggacagcaaggcccaagaggcgaacaaggt
cttacagggatgcctggaatccggggcccaccaggaccttctggagacccaggaaagcca
ggtctcacaggaccccaaggacctcagggacttcctggtaccgccggccgacccgggcct
aaaggtgaaccaggagctccaggcaggattgtgacttcagaggggtcatcgactatcacc
gtcccaggccccccgggacctcctggagccatgggacccccaggacctccaggtgtgcca
ggccccatcggcccagctggtctcccaggacagcaaggcccacgaggggagccagggctt
gctggtgaatcgttcctgagcagcactcagtccctctccgaggtcctctccacccaaggt
cttgatttacgaggtcccccaggcccacctggcccacctgggccaccaggagcttccatt
ccaggcccaccaggaccccgaggcccagcaggggaaggcttgccaggcccaccaggccca
ccaggatctttcctgaccggctcagagaccttcttctctggccctccaggcccacctggc
cccccaggccccaagggagaccaaggccccccaggcccccgaggacaccaagattccagt
tctctcggactcaacctacagggaccgccaggcccacccggccctcagggacccaaaggt
gacaaaggtgatcctggagtcccaggggctgttggtgttcctggtggtcactctcaaggg
ggatcaccatccagcaccgtgttcctgccaggcccgccaggccccccggggccccctggg
cctccaggctctctcagcagctctggcctggagattcagcagtacatctctgactacatg
cagagtgacatcattaggtcttatttctctggagttcagggtcccccaggcccacctggt
cccccagggcctgtcaccaccatcaggggtgagacttttgactactcggagctggcaagc
ctcgtcgtgagctacttacagacttcggggaccagcatcggcctgtcgttggcctccgtc
tcttctgaggacatcctggccatgctgcagcgggatgaggtgcgtcagtacctacgtcag
tatctgatgggccctcagggtcccccggggccaccaggagccggtggcgattggtccctc
cagtctttggactacgcagagctgagcagtcgcattctcagctacatgtcgagttctgga
atcagcattgggcttcctggccccccagggccccctggcttgccgggaacatcctatgag
gagctcctctccttgctccaagggtctgagttcagaggcatcattgggcccccaggcccc
cctgggcccccagggatcccaggcaacgcgtggtccagcatcagcgtggaggacctctca
tcttacttgcatacggccggcttgtcatccatcccaggccctccaggccctcctggtccc
ccaggccctcgagggcctccgggtgtctcaggagctctggcgacatatgcagctgaaaac
accgacagcttccggagcgaactgatcagctacctcacgagtcctgatgtgcgcagcttt
atcgttggtcccccaggccctcccgggccccagggaccacctggggacagccgcctagtg
tccatggatggcccctacagtcggggtagcagctcctcctcaggcagctcctacagctct
tcaatgggcataggaggagccagcgaaggctccctgggcgaagggggagcctttggcctg
gacatgggcctgggccgaggctatggggcagcagcaggaaatggcatgtatggtggcaat
ggcggatattttggggctggctttgctggaggtctggattacaacgagctggctgttcgg
gtgtccgagagcttgcagcgtcagggcctgctacaaggaatggcctacactgtccagggc
ccaccaggccggcctggaccccaggggccccccggcatcagcaaggtcttctctgcctac
agcaacgtgaccgaggacctcatggacttcttccgaacttatggagccattccaggaccc
cctgggcagaagggagaggtgggcatcccaggacccaaaggtgacaggggtcctgctgga
ccaccaggtcggcctgggtcacccggaccccgagggcacaagggagaaaaaggagacaga
ggcgaccaggtctatgctgggaggaggagaaggagaagtgtcgccaccaagccatga
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