Equus asinus (ass): 106823439
Help
Entry
106823439 CDS
T04645
Name
(RefSeq) ATP-dependent RNA helicase DDX19A isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
eai
Equus asinus (ass)
Pathway
eai03013
Nucleocytoplasmic transport
eai03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106823439
03015 mRNA surveillance pathway
106823439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eai03019
]
106823439
Enzymes [BR:
eai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106823439
Messenger RNA biogenesis [BR:
eai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
106823439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
106823439
NCBI-ProteinID:
XP_014684623
LinkDB
All DBs
Position
28:complement(50450810..50475619)
Genome browser
AA seq
478 aa
AA seq
DB search
MATDSWALAVDEQEAAVKSMGNLQIKEEKVKADTNGVIKTSATAEKTDDEEKEDRAAQSL
LNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQEN
ALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVQPAERYPQCLCLSPTYELALQTGKV
IEQMGKFHPELKLAYAVRGNKLERGQKISEHIVIGTPGTVLDWCAKLKFIDPKKIKVFVL
DEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREE
ETLDTIKQYYVLCNNRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVA
LLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNE
TYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLDEIEKIAN
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgactcttgggccctcgcagtggacgagcaggaagcggctgtcaagtcgatg
ggtaatttgcagatcaaagaagagaaagtgaaagcagataccaatggtgttatcaaaacc
agtgctactgcagagaaaacagatgacgaagagaaagaggacagagctgcccagtcctta
ctcaacaagctgatcagaagcaaccttgtcgataacacaaaccaggtggaagtgctccaa
cgggatccaaactcccccctctactcagtgaagtcctttgaggagcttcggctgaaacca
cagcttctccagggagtctatgccatgggcttcaaccgtccatccaagatacaggagaat
gcgttacccatgatgctcgctgagcccccacagaacctcattgcccagtctcagtctggt
actggtaaaacagctgccttcgtcctggccatgctcagccgagtgcagccagcagagagg
tacccccagtgtctgtgcctctccccaacgtatgagctggcgcttcagacaggaaaagtg
attgagcagatgggcaaatttcatccggaactaaagcttgcttatgctgttcgaggcaat
aaattggaaagaggtcagaagatcagtgagcacattgtcattggcacccctgggaccgtt
ctggactggtgcgccaagctcaagttcattgaccccaagaagatcaaagtgttcgttctg
gatgaggctgacgtgatgatagctactcagggccaccaagatcagagcatccgcatccag
aggatgctgcccagaaactgccagatgctgcttttctctgccacttttgaagactctgtg
tggaaatttgcccagaaagtggtcccagatcctaacattatcaaactgaagcgtgaggag
gagacgctggacaccatcaagcagtattacgtcctttgcaataacagagatgagaaattc
caggccttgtgtaacctctacggggccatcaccattgctcaagccatgatcttctgccat
acccgcaaaacagctagttggctggcagcagagctctcaaaagaaggccaccaggtggcc
ctgctgagtggtgaaatgatggtggagcagagggctgcagtgattgagcgcttccgagag
ggcaaagagaaggttctggtgaccaccaacgtgtgtgcccgcggtattgatgttgaacag
gtgtctgtcgtcatcaactttgaccttcctgtggacaaggacgggaacccggacaacgag
acctacctgcaccggattgggcgcactggccgctttggcaagaggggcctggcggtgaac
atggttgacagcaagcacagcatgaacatcctgaacaggatccaggagcattttaataag
aaaatagaaagactggacacagatgatttggatgaaattgagaaaatagccaactga
DBGET
integrated database retrieval system
