Equus asinus (ass): 106823758
Help
Entry
106823758 CDS
T04645
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin alpha-1-like
KO
K16493
protocadherin alpha
Organism
eai
Equus asinus (ass)
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
eai03036
]
106823758
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
eai04515
]
106823758
Chromosome and associated proteins [BR:
eai03036
]
Eukaryotic type
Centrosome formation proteins
Other centriole associated proteins
106823758
Cell adhesion molecules [BR:
eai04515
]
Cadherins
Protocadherins
106823758
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_3
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
106823758
NCBI-ProteinID:
XP_044636580
LinkDB
All DBs
Position
12:18152979..18156236
Genome browser
AA seq
825 aa
AA seq
DB search
MLFSRRGGKGARPLLLSLLLFAAWEAGSGQVRYSVPEEAKHGTFVGRIAQDLGLELAELV
PRLFRVASKGRGDLLEVNLQNGILFVNSRIDREELCGQSLECSIHLEVIVDRPLQVFHVE
VEVKDINDNPPVFREREQRLFIPESRLLDSRFPIEGAADADIGTNALLTYTLSPSDYFSL
DVQASDELSKSLSLELRKSLDREETPELHLLLTATDGGKPELASTVKLLITVLDVNDNAP
LFAQAVYRVHLLETTANGTLVTTLNASDADEGVNGEIVFSFGNDVPLNIQKHFKIDLSSG
EIRLTGRLDYEEAKSYEIQVKAVDKGSPPMSNHCKVLVKVLDVNDNAPELVVTSLSLPVR
EDAPLSTVIAFISVSDRDSGVNGQVTCTLTPHVPFKLVSTFKNYYSLVLDSALDRESMEN
YEVVVTARDGGSPSLSATASLSVEVADVNDNAPAFAQPEYTVFVKENNPPGSHIFTVSAW
DADAQENARVSYSLVERRVGERALSSYVSVHAESGKVYALLQPLDHEELELLQFQVSARD
AGVPPLGSNVTLQVFVLDENDNAPALLPPGAGGGAGAVSELVSRSVGAGHVVAKVRAVDA
DSGYNAWLSFELQPAAGGGRSPFRVGLYTGEISTTRALDEADAPRQRLLVLVKDHGEPAL
TATATVLLSLVESGQAPKASSWAPVGAASAETALVDVNVYLIIAICAVSSLLVLTLLLYT
ALRCSALPTEGVFGPGKPTLVCSSAVGSWSYSQQRRQKVCSGEGPPKTDLMAFSPCLPPG
PNTLQENEHPETNLDLSGNVSLNFKLWLYFLKKFNLSNHLFKYQF
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgctgttttctaggcgaggaggcaagggagcccggcccctgctgctctcacttctgctc
tttgctgcctgggaggctgggagcgggcaggtccgttactcggtccccgaggaggccaaa
cacggcaccttcgtgggccgcatcgcgcaggacctggggctggagctggcggagctggtg
ccgcgcctgttccgggtggcgtccaaaggccgcggggaccttctggaggtaaatctgcag
aatggcattttgtttgtgaattctcggatcgatcgcgaggagctgtgcggacagagcctg
gagtgcagcatccacctggaggtgatcgtggaccggccgctgcaggttttccatgtggaa
gtggaggtgaaggacattaacgataatccaccggtcttcagagagagagaacaaaggtta
tttattcctgaatctagactgctggattcacgcttcccgatagagggcgctgctgatgca
gacattggtaccaacgctcttctaacgtacaccctcagccccagtgattatttctctttg
gatgtacaggcaagtgatgaactgagtaagtcactttcgcttgaattgaggaaatctttg
gacagggaagaaacaccagaacttcatttattattgacagctactgacgggggcaaacca
gagctggcaagtacagttaaactgctgatcacggtgctcgacgttaatgataacgcccca
ttgtttgctcaggccgtgtacagagtccacttattagagactacggcaaatggaacatta
gtgaccacattaaacgcctctgacgctgacgaaggtgtaaatggggaaattgtgttttcc
tttggcaatgatgttcctctcaacattcaaaaacacttcaaaattgatctcagttcagga
gaaattaggctaactggcagactggattatgaagaagcaaaatcctacgaaattcaggta
aaagcagttgataaaggaagtcctccaatgtcaaatcactgcaaggttttagtgaaagtg
ctggatgtaaatgataatgctccagaattggtggtcacgtccctgtcgttgccggtcagg
gaggacgctccactcagcacggtcatagccttcatctccgtgtccgaccgtgactccggt
gtcaacggccaggtgacctgcaccctgacgcctcatgtccccttcaagctggtgtccact
ttcaagaattactattcgctggtgctggacagcgccttggaccgcgagagcatggagaac
tatgaggtggtggtgacagcgcgggacgggggctcgccttcactgtcggccacggccagc
ttgtccgtggaggtggccgatgtgaacgacaacgcaccggcgttcgcgcagcccgagtac
acggtgttcgtgaaggagaacaacccgccgggcagccacatcttcacggtgtctgcgtgg
gacgcggacgcgcaggagaacgcgcgggtgtcctactcgctggtggagcggcgcgtgggc
gagcgtgcgctgtcgagctacgtgtcggtgcacgcggagagcggcaaggtgtacgcgctg
ctgcagccgctggaccacgaggagctggagctgctgcagttccaggtgagcgcgcgcgac
gcgggcgtgccgcctctgggcagcaacgtgacgctgcaggtgttcgtgctggacgagaac
gacaacgcgcccgcgctgctgccgcctggggcgggcggcggggccggcgcggtgagcgag
ctggtgtcgcggtcggtgggcgcgggccacgtggtggcgaaggtgcgcgcggtggacgcg
gactctggctacaacgcgtggctgtctttcgagctgcagccggcggcgggtggtgggcgc
agcccgttccgcgtagggttgtacacgggcgagatcagcacgactcgcgccctggacgag
gcggatgcgccgcgccagcgcctgctggtgctggtgaaggaccacggcgagcctgcgctg
acggccacggccactgtgctactgtcattagtggagagcggccaggcgccaaaggcctcg
tcgtgggcgccggtgggcgccgcgagcgcagagacggcgctggtggatgtcaacgtgtac
ctgatcatcgccatctgcgcggtgtccagcctgttggtgctcacgctgctgctgtacacg
gcgctgcggtgctcggcactgcccaccgagggcgtgttcgggccggggaagcccacgttg
gtgtgctccagcgcggtggggagctggtcgtactcgcagcagaggaggcagaaggtgtgc
tctggggaggggccacccaagaccgacctcatggccttcagtccctgtcttcctcccggt
ccgaacacactgcaagagaatgaacatccagaaacaaatttggacctttccggtaatgta
agtctaaatttcaagctttggctctattttttaaaaaaatttaacttatctaaccatctt
ttcaaatatcagttttaa
DBGET
integrated database retrieval system
