Equus asinus (ass): 106824367
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Entry
106824367 CDS
T04645
Symbol
NUP42
Name
(RefSeq) nucleoporin NUP42 isoform X1
KO
K14321
nucleoporin-like protein 2
Organism
eai
Equus asinus (ass)
Pathway
eai03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106824367 (NUP42)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eai03019
]
106824367 (NUP42)
Messenger RNA biogenesis [BR:
eai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106824367 (NUP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_CCCH_4
zf-CCCH_4
zf-CCCH
zf-CCCH_DUS3L
zf-CCCH_2
JetA
Motif
Other DBs
NCBI-GeneID:
106824367
NCBI-ProteinID:
XP_014686106
UniProt:
A0A9L0J8U9
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Position
1:complement(47329698..47345125)
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AA seq
420 aa
AA seq
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MTICQFFLQGRCRFGNRCWNEHPGSGGAVGGRQPQPSGSNRRGWNTTSQRYSNVIQPSSF
SKSTPWGGSRDQEKPSFGSFDSGASTSRNRGFALSQNPFASPSSDEDKDEKKLLEGIVKD
MEVWESSGQWMFSVYSPVKKKSNISGFTDISPEELRLEYHNFLTSNNLQSYLNSVQQLIN
QWRNRVNELKSLNTSTKIALLSEVKDGVNQAAPTFGFGSRQTVTFGSPGFPVNNSSSGSA
QNFSFKPSSGFAAATSGSASVSQNTPAFGAAPSASSAITTSTPAFGFRKPEITSAASFSF
KSPAASGFGLPRFSGFPASMAAGPVGVPVAPAFGSSSSVAGFGGAGSRSHTAFSKSSGDA
FGISSMSASLPVSSGSTTTDNVLFTPKDQLTAEELEQFQSKKFTLGKIPLKPPPVELLNI
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaccatttgtcagttcttccttcaaggccggtgccgctttggaaaccggtgctggaac
gaacatcccggctccgggggtgcggtcggaggacggcagccacagccctcaggtagtaac
agacgtggatggaataccaccagccagagatattccaatgttatccagccatccagtttc
tccaaatccacaccatgggggggcagcagagatcaagaaaagccatctttcggttctttt
gattctggagcttcaactagtaggaacagggggtttgcattgtctcagaatccatttgct
tcacctagctctgatgaagacaaagatgaaaagaaacttctggaaggaattgtaaaagat
atggaagtttgggaatcatcagggcagtggatgttttctgtttattcaccagtgaaaaag
aaatctaatatttcaggttttacagacatttcaccagaggagttgaggcttgaataccat
aacttcttaaccagcaataacttacagagttatctaaattccgtccaacagttaataaat
cagtggaggaacagggtaaatgaattgaaaagtctaaatacatcaactaaaatagctttg
ctctccgaggtaaaggatggagtaaatcaagcagcacctacatttggatttggcagtagg
caaacagtaacatttgggtcaccaggttttccagtgaataacagcagcagtggtagtgct
cagaattttagttttaaaccaagctccggatttgccgctgccacttctggaagcgcttct
gtgtcccagaatactccagcatttggagctgcaccctctgccagttctgccatcactact
tctactccagcttttggatttagaaaacctgaaatcacatctgctgcttcattttcattt
aaaagccctgcagcttctggttttggattgcccagattttcaggatttccagcttccatg
gcagcaggccccgtgggagttcccgtggccccagcctttggaagcagcagttctgtggct
ggttttggtggcgcaggctcccgttctcacactgctttttccaagtcatccggtgatgcc
tttggaattagcagcatgtctgcctctctccctgtctcaagtggcagcaccaccacagat
aatgtgttattcacacccaaggatcaactgacagcagaagaactggagcaatttcaatcc
aagaaatttactctgggaaaaattccattaaagccaccacctgtggaacttctaaatatt
taa
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