Equus asinus (ass): 106824723
Help
Entry
106824723 CDS
T04645
Symbol
RIF1
Name
(RefSeq) telomere-associated protein RIF1 isoform X1
KO
K11138
telomere-associated protein RIF1
Organism
eai
Equus asinus (ass)
Pathway
eai04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
106824723 (RIF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eai03032
]
106824723 (RIF1)
DNA replication proteins [BR:
eai03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
106824723 (RIF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rif1_N
XMAP215_CLASP_TOG
Motif
Other DBs
NCBI-GeneID:
106824723
NCBI-ProteinID:
XP_044624865
LinkDB
All DBs
Position
4:complement(58365662..58423038)
Genome browser
AA seq
2452 aa
AA seq
DB search
MTAPGPSPLAPLLETLEDPSASHGEQTDAYLTLTSRMTGEDGKEVIVEIEKKLPQLYKVL
KTHISSQNSELSSAALQALGFCLYNPKITSGLSEKNIQELLSKLNDIVKSSDKNVRTRAL
WVISKQTFPTEVVGKVVSSIIDSLEIVFNRGDVHSAVVDYEALNVIIRLIEQAPVQMGEE
SIRWAKLVIPLVVHSAQKVHLRGATALEMGMPLLLQKQQEIASITEQLMTTKLLSELQKL
FMSKNETYVLKLWPLFVKLLGKTLHRSGSFINSLLQLEELGFRSGAPMIKKIAFIAWKSL
IDNFALNPEILCSAKRLKLLMQPLSSIHVRTESLALTKLEVWWYLLMRLGPHLPANFEQV
CVPLIQSTISIDSNASAQGSSSRVAPSPGLNPMTPVHKGASAYGAPVTPRMNLNSNFGGM
ATIPSIQLLGLEMLLHFLLGPEVLNFAKQNKLVLSLEPLEHPLISSSSFFSKHANTLITA
VHDSFVAVGKDASDAVVSAIWKELISLVKSVIESGNKKERPGSEVLTLFLKSLESIVKSE
VFPVSKTLVLVEITIKGLPQKVLGSPAYQVANMDILNGTPALFLIQLIFNNNLLKCVEDE
RFFLNLETLVGCVLSGPTSPLAFSDSVLNVINQNAKQLENKEHLWRMWSIIVTPLTELIN
QTNEVNQGDALEHNFSAIYGALTLPINHIFSVQKFPVTTMKTLLRTWAELYRAFARCAAL
VATAEENLCCEELSSKIMSSLEDEGLSNLFFLDRIIHVITVMVDCIDFSPYNNKYQPKVK
SPQRTSDWSKKKKEPLGKLASLFKLIVRVICSFHTLSLKEVHSDTLLAVGSSITSILSNV
LGHISLPSMIRKIFATLTRPLALFYENSKLDELPKVYSCMNNKLEKLLGEIIACLHFSYT
GTYDSELLEHISPLLCITFLHKNKQIRKQSAQFWNATFAKVTMLIYPEELKPVLRQAKQK
FLLLLPGLENVGIMEESSGPYSEGTENSQLNMKISGMERKSSGKRDSFLTQTKDTKGNMK
PPAKFKPESTPKTKSEMPLEEEKSVDFVFIPPEGKEAKERILTEHQKEVLKTKRCDIPAM
YNNLDVSQDALSSQYGQEESMEIPTLIEKSKEDSKEEQMESDIVIPQDVTENCGMDERLE
KASLSNNGCGSIEETSPEVLNSNDAGKKALISSKETSSECAASAENTFGVSSSSVSNATI
SGTPLQPTSRRQSFITLEKFDGSENRPFSLSPLNNMSSTVTVKNNQEDTTKADAPLKAKG
REVALSKSDSEKIVHGIKRSSRRSNKAEQTGNKRSKALMRSDQGKNTQEFIDGMAALENN
PPGLLNQTECILDNQVHLSESAMECGDTMLKPTMENAILLENTVEEKTLGANLESKENTP
PAAIPADQMINEDSHVQITPNQKTLRRSLRRRSETAEPTTESQDKENNHQKKERRKEDEK
ALQKSPSHVKDDVLPKQKLISEQTIQENLVEKGNNLHEKTFGETSTNAEIDENRRKADLE
NTKSEGDGAQDVADKSSEKPVMGRTRYQTRRASQGLLSSIENSESDSSEAKEEGSRKKRS
AKWKNKSSDSVDIEDQEEKMVKQECIKVEKQTDDYKGNSEVDIDIKSQICEEKDKSSTIT
LQDSTISSDVSQVSDDVSNTYEGKSEANKCSEYSFSNLPVPESNLRTRNVNKRLHKRDSI
ENNSVGESTSAVTPDVILLSEKTLQTPECQHKRSRRVRRSKGCDCCGEKSQPQEKSFTGL
KNTENYDIKVSETKKTDVQTPEAISETSKANLYCGVKLLDEHHSVNFNLGLKEENDTTNN
SLIVSETELKENTIQDSLPSEMVNFTEEIYDTDSEEAVSVESQELSDKKCKTVGPCLSDS
KNISLECSTFETKEEISEAILKKEPSIEDSVNIEANACKLKAESNPEGVEGMELDVETDK
SEVSFSEQKSAGGGVSEERITEENCERSDESEADAGEKLKAEEAVIEEFNSVIGHSDNTP
VKVSAQIEISEQTAVGEQTAVGELSGGSDESDLGSSEERDAEMENCEETVISEVNAETDH
VNETEDGDLTSKASKPVESKTERLNVEVDRAVPNTLEVSTEEGKVDCNKPETNMKLNRSE
VTKLGDSQMVVRNDEILQEIPTLEKMEETAQSLKSKTTISELVTEDNDTSPQKLRELDPL
LMSANDSPRGTQTRCVWSPLASPSTSILKRGLKRPLQEDEISSPVHKVRRVSFADPIYQA
GLADDIDRRCSVRSHSSNTCLVVKNVKTSPTAQFKIAEMAKESMPCPTESVYPALVNCLA
PVDIILPQITSNMWARGLGQLIRAKNIKTIGDLSTLTASEIKTLPIRSPKVSNVKKALRV
YHEQQVKSRGLEEIPVFDISEKTVNGIENKSLSSDEDRLASDLINPVALETPLSKNLVAQ
ISTLALQLNSEDLHNYSGSQLFEMHEKLGSMANSIIKNLQSRWRSPAQENSV
NT seq
7359 nt
NT seq
+upstream
nt +downstream
nt
atgacggccccgggtccgagccccctcgcgccgctgttggagactttggaagacccttct
gcctctcatggagagcagaccgacgcgtacctgactctgaccagtcgcatgactggagaa
gatggaaaagaagtcattgtagaaatcgagaaaaaacttcctcagctatacaaagtctta
aagactcacatttccagtcaaaactcagagctcagtagtgctgctctacaggccttgggg
ttttgcttatataatcccaaaattacctcaggattatcagagaaaaatattcaagaactg
ctttcaaaattgaatgatattgttaagagttcagacaaaaatgtacgtaccagggcactt
tgggtgatatccaagcagacgtttcctactgaagttgttggcaaagtagtatccagtata
attgattcgttagaaatagtatttaatagaggagatgtgcattctgctgttgttgattat
gaagcattaaatgtcatcataaggctaattgaacaagccccagttcaaatgggagaagag
tcaattaggtgggcaaaactggttatacctttagtggttcattcagcccaaaaggtacat
ttgcggggagcaactgctctagagatgggaatgcctttgttacttcagaaacaacaagaa
atagcatctatcacagagcagcttatgactaccaaattactttcagaactccaaaagcta
tttatgagtaaaaatgagacttacgtgttaaaattatggcctttgtttgtcaaacttctt
gggaagaccttgcatcgaagtgggagtttcattaattctctattacagctggaagaacta
ggatttcgtagtggagcacccatgattaaaaaaatagcttttattgcctggaagagttta
atagataattttgctttaaacccagaaatactatgtagtgcaaaaagactgaagttgcta
atgcagcctttgagttccatccatgtgagaacagaaagtctagcgctaacaaaactagaa
gtctggtggtatttattgatgagacttggacctcatcttcctgctaattttgaacaggtt
tgtgttcctctgattcaaagcacaataagtattgattctaatgcttcagctcaaggcagt
tcatctcgtgtagcaccttctccaggtttaaaccctatgactcctgtacacaaaggtgcc
tcggcatatggagcccctgtaactccccggatgaacttgaattccaattttggtggaatg
gccacaatcccctctattcaacttttgggacttgaaatgttgcttcattttttgttgggt
ccagaagtcttgaattttgctaagcaaaacaaacttgtattgagcttagaaccactcgaa
catccgttaatcagcagctcttcttttttttccaagcatgcaaatacacttatcactgct
gttcatgatagctttgttgcagttggaaaagatgcttctgatgcagttgtcagtgctatt
tggaaggaactaattagcttggtgaagtcagttattgaatcaggtaacaaaaaagagaga
ccaggttctgaagttttgactctctttttaaaatctttggaaagcatagtgaagtcagaa
gtatttcctgtatcgaaaacactggtcctcgtggaaattacaattaaaggacttcctcag
aaagtattaggttcaccagcatatcaggttgctaatatggatattcttaatggaactcct
gctttgttcttaattcaattaattttcaacaacaatctcttgaaatgtgtagaagatgaa
aggttttttctcaatctggaaacacttgtaggctgtgttctttctggtccaacttcacca
ctggctttcagtgactctgttttaaatgttattaatcaaaatgcaaagcagctggaaaac
aaggagcatctttggagaatgtggagtattatagtcaccccattaactgaattaattaat
cagaccaatgaagtaaatcaaggtgatgccttagaacataattttagtgccatctatggt
gcactgactttaccaataaaccatattttttcagtacagaaatttccagtgaccaccatg
aagaccttacttagaacttgggcagaactgtatagagcatttgcccgctgtgctgctttg
gtggcaactgcagaagagaatttgtgctgtgaggaactttcttccaagataatgtccagt
ttggaggatgaaggcctttcaaatttgttcttcttggatagaatcattcatgttattact
gtaatggttgattgcatcgacttctcaccatataataataaatatcagcccaaagttaaa
tcaccgcagagaacttcagattggtccaaaaagaagaaagagcccctagggaaattggct
tctttatttaaacttattgtcagagtgatctgttctttccacactctgagcctcaaggaa
gtacattctgatactctccttgctgtcggcagttcaatcaccagcattctttccaatgta
cttggacatatttctttaccttctatgatccgaaaaatatttgcaactttaaccagacct
ctggcattgttctacgaaaactcaaagcttgatgagcttcctaaagtgtatagttgtatg
aacaacaagttagaaaagcttcttggagaaattattgcttgtctgcacttcagctacact
ggaacttatgacagtgaacttctggaacacatctctccgttattatgcataacatttttg
cacaagaataaacagattcgaaaacagagtgctcagttctggaatgccacatttgctaaa
gtgacgatgttgatttatcctgaagagttaaaaccagtactaagacaagccaaacagaaa
tttctgcttctattgcctggtctggaaaatgttggaattatggaggaatccagtggacca
tattcagagggaacagaaaattcacagttaaatatgaagataagtggcatggaaagaaaa
tcaagcggaaaaagagattcttttttgacacaaaccaaggatacaaaaggaaatatgaaa
ccaccagccaaattcaaaccagaatcaactccaaaaacgaagagtgaaatgcctttagaa
gaagaaaagtctgttgactttgtgtttatacctccagaaggaaaagaagccaaggaaaga
atactgactgaacatcagaaagaagtactcaaaacaaagaggtgtgatatacctgccatg
tataataatctggatgtttcacaagatgctttatcttctcagtatggtcaggaagaatct
atggaaattcctaccttaattgaaaaatcaaaggaagattcaaaggaggaacaaatggag
agtgacattgtcattcctcaagatgtcacagaaaactgtggtatggatgaacgtcttgaa
aaagcttccctttcaaataatgggtgtggttccattgaggaaactagtccagaagtactg
aacagtaatgatgctggaaagaaggctttaatttcatcaaaggaaacatcatctgaatgt
gcagctagtgcagaaaacacttttggtgtcagcagtagctcagtttctaatgccaccatt
tctggaactcccctacagcctacaagtcgaaggcaatcctttattactttggagaagttt
gatggttcagaaaatagaccttttagtctgtcccccttgaataatatgtcttcaactgtt
acagtgaaaaataaccaagaagacactactaaagcagatgctccactaaaagcgaaggga
agagaagtggctctttcaaaatctgactctgaaaaaatagtgcatggaattaagagatca
agccggaggtcgaataaagctgaacaaacagggaataaaagatctaaggccttaatgaga
agtgatcagggaaaaaatacgcaggaattcattgatggcatggcagccttagaaaataac
ccacctggtttgcttaatcaaacagagtgtattttagataatcaagttcatctctctgaa
tctgcaatggagtgtggagatacaatgcttaaaccaacgatggaaaatgctatattatta
gaaaatactgtagaagagaaaaccttaggagctaatttggaatctaaagaaaatacaccc
ccagctgcgataccagcggatcaaatgataaatgaggatagtcatgttcagataactcca
aatcaaaaaaccctcagacgctccttaaggcgacgttccgaaacagcagagcctaccact
gagagccaagataaagaaaataatcatcaaaaaaaggaaagacgtaaggaagacgaaaag
gctcttcagaagagtccatcacatgtaaaagatgatgtgttacctaagcaaaaactgatt
tctgaacaaaccatacaggaaaacttagttgagaaaggaaataatttacatgagaagact
tttggggaaaccagcacaaatgctgaaattgatgaaaataggagaaaggcagaccttgag
aatactaaatctgagggagatggtgcccaggacgttgcagataagtcctctgagaaacca
gtaatgggacgaacacggtatcaaacaagaagagcatcccagggtttactttccagcatt
gaaaactcagaatctgatagttctgaggcgaaagaagaaggttccagaaagaagagatct
gcgaaatggaaaaacaaaagcagtgacagtgttgacattgaagatcaggaagagaaaatg
gtgaaacaagaatgtataaaagttgaaaagcagacagatgattataaaggaaattctgaa
gtagacatagatataaaatctcaaatttgtgaggaaaaagacaaaagtagtactataact
cttcaagattctacaatatcttcagatgtatctcaagtttctgatgatgtgtcaaatact
tatgagggaaaaagcgaagccaacaaatgttcagaatattccttttcaaatcttcctgta
ccagaatcaaatctaaggactagaaatgtcaataagagattacataagcgagattctata
gaaaataacagtgtgggagaatccacaagtgcagtgactccagatgttattttgctttct
gaaaaaactctccaaacacctgaatgccaacacaagagaagtaggagggtgaggagatct
aaaggttgtgattgctgtggagaaaaatcacagcctcaggaaaagtcattcactgggtta
aagaatacagaaaattatgatataaaggtcagtgaaacaaaaaaaacagatgtgcaaaca
cctgaagctatatcagaaacttctaaagctaatctgtactgtggggtaaagcttttagat
gagcatcatagtgtgaattttaatttgggtctcaaggaggagaatgatactactaataat
tcattaattgtatctgaaactgagttgaaagaaaatactattcaagactcgcttccttct
gaaatggtaaattttacagaagaaatttatgatacagattctgaggaagcagtatctgtc
gaaagccaagagctgtccgataaaaaatgtaaaactgttggcccatgtttaagtgattcc
aaaaatatttcgctggaatgttctactttcgagaccaaagaagaaatatcagaggctatc
ctgaaaaaagaaccaagtatagaggacagtgttaatattgaggcaaatgcttgtaaatta
aaagcagaatccaatccagaaggagtagaaggtatggaattggatgtagaaactgataaa
tctgaagttagcttttctgaacaaaagagtgccggaggtggtgtttctgaggaaaggata
acagaggaaaactgtgaaagaagtgatgaatctgaagcagatgcaggtgaaaaattgaaa
gctgaagaagcagtaattgaggaatttaattcagttattggtcattctgataacacacct
gtaaaagtgagtgctcagatagagatttctgaacaaacagcagttggggaacaaacggca
gttggggaactaagtggaggaagtgatgaatctgatctaggctcatctgaagaaagggat
gctgaaatggaaaattgtgaagaaacagtgatcagtgaggtgaatgctgaaactgaccat
gttaatgaaacagaagatggagacctgactagcaaagcctctaagcctgtagaatccaaa
acagagagattgaatgtagaagttgacagggctgttcccaacacacttgaggtgagcact
gaagaaggaaaagttgactgtaataaacctgaaacaaatatgaaacttaatagatctgaa
gtaacaaaattaggtgacagtcaaatggtagtgcgaaatgatgaaattttacaggaaatt
cctactttagagaagatggaggaaacagcacagtctctgaaatctaaaacaactatctct
gagctggtaacagaagacaatgatacatctcctcaaaaattaagggaacttgatccttta
ctgatgtcagcaaatgacagtcctaggggcacgcagacacgctgtgtctggtctcctttg
gcttctccttccaccagcattttaaagagaggactaaaaaggccccttcaagaagatgag
atctcttcacctgttcacaaggttcgccgtgtctcctttgcagatccaatataccaagca
ggattggcagatgacattgatagacggtgctctgttaggtcccattcttcaaatacttgt
ctcgtagtaaaaaatgttaaaacttcacctactgcacagtttaagattgcagaaatggct
aaagaatccatgccatgcccaacagaaagtgtttacccagctttggtgaactgtttggca
ccagttgacatcattttacctcagattacatcaaacatgtgggcaagaggactgggacaa
cttattagagccaagaatataaaaacaattggtgatttgagtactcttacagcatctgaa
ataaaaactcttcctatccgttctccgaaagtgtccaatgtaaaaaaggctctcagagtc
tatcatgagcagcaggtgaagtctcgtggactagaagagattccagtttttgatatttct
gagaaaacagtaaatggaatagaaaataaatctctctcttctgatgaagacagacttgcc
tcagatttaattaatcctgttgctttagaaactccgctatctaaaaatctcgtggcacag
attagtacacttgctcttcaactgaattcagaagatctccataattattcaggaagtcag
ctatttgaaatgcatgagaaacttggtagcatggcaaactctataataaaaaatctgcag
tcacgttggaggtcgccagcccaggaaaattctgtctag
DBGET
integrated database retrieval system
