Equus asinus (ass): 106825051
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Entry
106825051 CDS
T04645
Symbol
VARS1
Name
(RefSeq) valine--tRNA ligase isoform X2
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
eai
Equus asinus (ass)
Pathway
eai00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
106825051 (VARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
eai01007
]
106825051 (VARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eai03016
]
106825051 (VARS1)
Enzymes [BR:
eai01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
106825051 (VARS1)
Amino acid related enzymes [BR:
eai01007
]
Aminoacyl-tRNA synthetase
Class I (U)
106825051 (VARS1)
Transfer RNA biogenesis [BR:
eai03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
106825051 (VARS1)
Prokaryotic type
106825051 (VARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
GST_C
tRNA-synt_1g
tRNA-synt_1_2
Jag_N
GST_C_2
tRNA-synt_1e
Arc1p_N_like
Motif
Other DBs
NCBI-GeneID:
106825051
NCBI-ProteinID:
XP_014687119
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All DBs
Position
8:complement(60344763..60358495)
Genome browser
AA seq
1264 aa
AA seq
DB search
MSILYVSPHPDAFPSLRALIAARYGEAGEGPGWGGAHPRICLQPPPTSRTPFPPPRLPAL
EQGPGGLWVWGATAVAQLLWPAGLGGPGGSRAAVLVQQWVSYSDTELIPAACGATLPALG
LRSSAQDPQAALGALGRALSPLEEWLRLHTYLAGEAPTLADLAAVTALLLPFRYVLDPSA
RRVWGNVTCWFTTCVQQPEFRAVLGEVVLYSGARPPSQQPGPEVPAPTKTAAQLKKEAKK
REKLEKFQQKQKIQQQQPPPGEKKPKPEKREKRDPGVITYDLPTPPGEKKDVSGTMPDSY
SPQYVEAAWYPWWEQQGFFKPEYGRSSVSAPNPRGIFMMCIPPPNVTGSLHLGHALTNAI
QDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLWREQGLSRHQLGREAFLREVWKWK
EEKGDRIYHQLKKLGSSLDWNRACFTMDPKLSAAVTEAFVRLHEEGVIYRSTRLVNWSCT
LNSAISDIEVDKKELTGRTLLSVPGYKEKVEFGVLVSFAYKVQGSDSDEEVVVATTRIET
MLGDVAVAVHPKDPRYQHLKGKSVIHPFLSRSLPIVFDDFVDMEFGTGAVKITPAHDQND
YEVGQRHGLEAISIMDSRGALVNVPPPFLGLPRFEARKAVLAALKEQGLFRDIKDNPMVV
PLCNRSKDVVEPLLRPQWYVRCGEMAQAASAAVTRGDLRILPEAHQRTWHAWMDNIRDWC
ISRQLWWGHRIPAYFITVNDPAVPPGEDPDGRYWVSGRSEAEALEKAAKEFGVSPDKISL
QQDEDVLDTWFSSGLFPFSILGWPNQSEDLSVFYPGTLLETGHDILFFWVARMVMLGLKL
TGRLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHGVSLQGLHDQLLNSNLDPSEVE
KAKEGQKADFPAGIPECGTDALRFGLCAYTSQGRDINLDVNRILGYRHFCNKLWNATKFA
LRGLGKGFVPSPTSEPGGHESLVDRWIRSRLTEAVRLSNQGFQAYDFPAITTAQYSFWLY
ELCDVYLECLKPVLNGVDQVAAECARQTLYTCLDVGLRLLSPFMPFVTEELFQRLPRRTP
QAPPSLCITPYPEPSECSWKDPEAEAAMELALSITRAVRSLRADYNLTRIWPDCFLEVTD
EATGALASAVSGYVQALASAGVVAVLALGAPAPHGCAVAVASDRCSVHLQLQGLVDPARE
LGKLQAKRGEAQRQAQRLRERRAASGYPVKVPLKVQEADEAKLQQTEAELRKVDEAIALF
QKML
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcctctacgtctcccctcacccggatgccttccccagcctccgagccctcata
gctgcgcgctacggggaggctggggagggtccgggatggggaggagcccacccccgcatc
tgtctccagccgcccccgaccagcaggactccctttcccccaccccgcctgcccgcccta
gagcaggggcccggtgggctctgggtgtggggggccacagctgtggcccagctgctgtgg
ccagcaggcctggggggccctgggggtagccgggcagccgtccttgtccaacagtgggtc
agttactccgacacggagctaataccagctgcatgtggggcaacgctgccagccttggga
ctccgaagctccgcccaggacccccaggctgcactgggggctctgggcagggccctgagc
cccttggaagagtggcttcggctgcacacctacctggctggggaggcccccactctggct
gacctggcggctgtcacagccttgctgctgcctttccgatatgtcctggacccctctgcc
cgccgggtctggggtaatgtgacttgctggtttaccacatgtgtccagcagccagaattc
cgggctgtgctgggagaggtggttctgtactcaggggctaggcctccttcccaacagcca
ggccctgaggtccctgcacccacaaaaacagctgctcaactcaagaaagaggcaaagaaa
cgggagaagctagagaaattccaacagaagcagaagatccaacagcagcagccgccccca
ggggagaagaaaccaaaaccagagaagagggagaaacgagatcctggggttattacctat
gacctcccaaccccacctggggaaaagaaagatgtcagtggcaccatgcctgactcctac
agccctcagtatgtggaggctgcctggtacccttggtgggagcagcagggcttcttcaag
ccggagtacgggcgttccagtgtgtcagcaccaaatccccggggcatcttcatgatgtgc
atcccaccccccaacgtgacaggctccctgcacctgggccacgcgctcaccaatgccatc
caggactccctgacccgatggcaccgaatgcggggagagaccaccctgtggaaccccggc
tgtgaccatgcgggcattgccactcaggtggtggtggagaagaaactctggcgcgagcag
gggctgagccggcaccaactgggccgagaggcctttctccgggaggtctggaagtggaaa
gaggagaaaggtgaccggatttaccaccagctgaagaagctcggcagctccttggactgg
aatcgagcctgtttcaccatggaccctaaactgtcagcagccgtgacagaggcctttgtc
cggctccacgaggaaggagtcatctaccgcagtacccgccttgtcaactggtcctgcacc
ctcaactccgccatctccgacattgaggtggataagaaggagctgacaggtcgcaccctg
ctctccgtgcctggctacaaggagaaggtggagtttggggtccttgtctcctttgcctac
aaggtccaaggctcagatagtgacgaagaggtggtggtggcgacaactcggattgagaca
atgctgggagatgtggctgtagctgtccatcccaaagatcccagataccagcacctgaag
gggaagagtgtgatccacccattcctgtcccggagcctccccattgtcttcgatgatttt
gtggacatggagtttggcacaggtgcggtgaagatcacccctgcacatgaccagaatgac
tatgaggttgggcagcggcatgggctggaagccatcagcatcatggactcccgaggggcc
cttgtcaacgtgcccccaccattcctgggcttgcccaggtttgaggccaggaaggcagtg
ctggcggcgctgaaggagcaggggctgttccgtgacatcaaggacaaccccatggtggtg
ccactttgcaaccggtccaaggacgtggtggagcctctgctgcggccgcagtggtacgtg
cgctgtggggagatggcccaggctgccagtgctgctgtgactcggggcgacctccgcatc
ctgcctgaggcccatcaacggacgtggcacgcctggatggacaacatccgggactggtgc
atctcacggcagctgtggtggggccatcgcatcccagcctacttcatcactgtcaatgac
ccagctgtacccccaggggaggaccctgatgggcggtactgggtgagtgggcgcagcgag
gccgaggccctcgagaaggcagccaaggagtttggagtgtcccccgacaagatcagtctc
cagcaagatgaggacgtattggacacctggttctcttcgggcctcttccccttctccatc
ctgggctggcccaaccagtcagaagatctgagtgtgttctacccggggacgctgctggag
accggccatgacatcctcttcttctgggtggccaggatggtgatgctcggcctgaagctc
actggcaggctgcccttcagagaggtgtacctccacgccatcgtgcgagatgcccacggc
cggaagatgagcaagtctctaggcaatgtcatcgaccctctggatgttatccatggagtc
tccctgcagggccttcacgaccagttactgaacagcaacctggatcccagcgaggtggag
aaggctaaagaagggcagaaggccgacttcccagcgggcattcccgagtgtggcactgac
gcgctccggtttgggctgtgcgcctacacatcccagggtcgtgacatcaacctggatgtg
aaccggatattaggataccgccacttctgcaacaagctctggaacgccaccaagtttgcc
ctccgtggccttgggaagggttttgtgccctcacccacctctgagcctggaggccacgag
agcctggtggaccgctggatccgcagccggctgactgaggccgtgaggctcagcaaccaa
ggtttccaggcctacgacttcccagctatcaccaccgcccagtacagcttctggctgtat
gagctctgtgatgtctacctggagtgcctgaagcctgtgctgaatggagtggaccaggtg
gcagctgagtgtgcccgtcagaccctctacacctgtctagacgttggcctgaggctgctc
tcacccttcatgcccttcgtgaccgaggagctgttccagaggctgccccggcggacgcca
caagctccccctagcctctgcattaccccctacccagagccctccgagtgctcctggaaa
gaccctgaggcggaagctgccatggagctggccctgagcatcactcgagctgtgcgctcc
ctgcgtgctgactacaacctcacccggatctggcctgactgtttcctggaagtgactgat
gaggccacaggcgccctcgcgtcagcggtgtcaggctatgtgcaggcgctggccagcgcg
ggtgtggtggctgtcctggctctgggggctcctgcaccccatggctgtgctgtggccgtg
gcctctgaccgctgctccgttcacctgcagcttcaggggctggtggacccggcccgggag
ctgggcaagctgcaggccaagcgaggtgaggcgcagcggcaggcccagcgtctgcgggag
cgccgtgccgcctcgggctaccctgtcaaggtgcccctcaaagtccaggaggcagatgaa
gccaagctgcaacagacagaagcagagctcaggaaggtggacgaggccattgccctattt
cagaagatgctgtga
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integrated database retrieval system
